RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 NOL10Q9BSC4 688 aaKnown RBP18.02■□□□□ 0.47
LRFN1-201ENST00000248668 BRMS1Q9HCU9 246 aa18.02■□□□□ 0.47
LRFN1-201ENST00000248668 LEMD3Q9Y2U8 911 aa18.02■□□□□ 0.47
LRFN1-201ENST00000248668 RIMBP2O15034 1052 aa18.01■□□□□ 0.47
LRFN1-201ENST00000248668 TSPY3P0CV98 308 aa18.01■□□□□ 0.47
LRFN1-201ENST00000248668 TSPY8P0CW00 308 aa18.01■□□□□ 0.47
LRFN1-201ENST00000248668 HSPA1LP34931 641 aa18.01■□□□□ 0.47
LRFN1-201ENST00000248668 CCZ1BP86790 482 aa18.01■□□□□ 0.47
LRFN1-201ENST00000248668 CCZ1P86791 482 aaPredicted RBP18.01■□□□□ 0.47
LRFN1-201ENST00000248668 ZNF710Q8N1W2 664 aa18.01■□□□□ 0.47
LRFN1-201ENST00000248668 PNMA1Q8ND90 353 aa18.01■□□□□ 0.47
LRFN1-201ENST00000248668 BPIFA3Q9BQP9 254 aa18.01■□□□□ 0.47
LRFN1-201ENST00000248668 CEP131Q9UPN4 1083 aa18.01■□□□□ 0.47
LRFN1-201ENST00000248668 RGS22Q8NE09 1264 aa18.01■□□□□ 0.47
LRFN1-201ENST00000248668 SYMPKQ92797 1274 aaKnown RBP18.01■□□□□ 0.47
LRFN1-201ENST00000248668 PRIMPOLQ96LW4 560 aa18.01■□□□□ 0.47
LRFN1-201ENST00000248668 CGNQ9P2M7 1197 aaKnown RBP18.01■□□□□ 0.47
LRFN1-201ENST00000248668 FAM237AA0A1B0GTK4 181 aa18■□□□□ 0.47
LRFN1-201ENST00000248668 TMEM232C9JQI7 657 aa18■□□□□ 0.47
LRFN1-201ENST00000248668 SCG2P13521 617 aa18■□□□□ 0.47
LRFN1-201ENST00000248668 CDC25AP30304 524 aa18■□□□□ 0.47
LRFN1-201ENST00000248668 BTDP43251 543 aa18■□□□□ 0.47
LRFN1-201ENST00000248668 UBASH3AP57075 661 aa18■□□□□ 0.47
LRFN1-201ENST00000248668 TTC38Q5R3I4 469 aa18■□□□□ 0.47
LRFN1-201ENST00000248668 KLHL10Q6JEL2 608 aa18■□□□□ 0.47
LRFN1-201ENST00000248668 SMARCE1Q969G3 411 aa18■□□□□ 0.47
LRFN1-201ENST00000248668 CD209Q9NNX6 404 aa18■□□□□ 0.47
LRFN1-201ENST00000248668 COBLO75128 1261 aa18■□□□□ 0.47
LRFN1-201ENST00000248668 MDM2Q00987 491 aaPredicted RBP18■□□□□ 0.47
LRFN1-201ENST00000248668 PTGDRQ13258 359 aa18■□□□□ 0.47
LRFN1-201ENST00000248668 PPP2R5BQ15173 497 aa18■□□□□ 0.47
LRFN1-201ENST00000248668 FMR1Q06787 632 aaKnown RBP eCLIP18■□□□□ 0.47
LRFN1-201ENST00000248668 ARMCX5Q6P1M9 558 aa18■□□□□ 0.47
LRFN1-201ENST00000248668 BAG3O95817 575 aa17.99■□□□□ 0.47
LRFN1-201ENST00000248668 PCP11498 1178 aaKnown RBP17.99■□□□□ 0.47
LRFN1-201ENST00000248668 ST5P78524 1137 aa17.99■□□□□ 0.47
LRFN1-201ENST00000248668 SBK1Q52WX2 424 aa17.99■□□□□ 0.47
LRFN1-201ENST00000248668 MFSD14BQ5SR56 506 aa17.99■□□□□ 0.47
LRFN1-201ENST00000248668 SMYD4Q8IYR2 804 aaPredicted RBP17.99■□□□□ 0.47
LRFN1-201ENST00000248668 ZNF444Q8N0Y2 327 aaPredicted RBP17.99■□□□□ 0.47
LRFN1-201ENST00000248668 GGA1Q9UJY5 639 aa17.99■□□□□ 0.47
LRFN1-201ENST00000248668 RGL2O15211 777 aa17.99■□□□□ 0.47
LRFN1-201ENST00000248668 PDS5AQ29RF7 1337 aaKnown RBP17.99■□□□□ 0.47
LRFN1-201ENST00000248668 SPATA31A6Q5VVP1 1343 aa17.99■□□□□ 0.47
LRFN1-201ENST00000248668 ACTN4O43707 911 aaKnown RBP17.99■□□□□ 0.47
LRFN1-201ENST00000248668 STX17P56962 302 aa17.99■□□□□ 0.47
LRFN1-201ENST00000248668 POLLQ9UGP5 575 aa17.99■□□□□ 0.47
LRFN1-201ENST00000248668 DDR1Q08345 913 aa17.98■□□□□ 0.47
LRFN1-201ENST00000248668 MKRN1Q9UHC7 482 aaKnown RBP17.98■□□□□ 0.47
LRFN1-201ENST00000248668 HOOK1Q9UJC3 728 aaKnown RBP17.98■□□□□ 0.47
LRFN1-201ENST00000248668 AMOTL1Q8IY63 956 aa17.98■□□□□ 0.47
LRFN1-201ENST00000248668 TEX11Q8IYF3 940 aa17.98■□□□□ 0.47
LRFN1-201ENST00000248668 IKBKBO14920 756 aa17.97■□□□□ 0.47
LRFN1-201ENST00000248668 SFPQP23246 707 aaKnown RBP eCLIP17.97■□□□□ 0.47
LRFN1-201ENST00000248668 TYW1BQ6NUM6 668 aa17.97■□□□□ 0.47
LRFN1-201ENST00000248668 QTRT2Q9H974 415 aaKnown RBP17.97■□□□□ 0.47
LRFN1-201ENST00000248668 PICALMQ13492 652 aa17.97■□□□□ 0.47
LRFN1-201ENST00000248668 HEATR3Q7Z4Q2 680 aa17.97■□□□□ 0.47
LRFN1-201ENST00000248668 HOMER1Q86YM7 354 aa17.97■□□□□ 0.47
LRFN1-201ENST00000248668 NFE2L3Q9Y4A8 694 aa17.97■□□□□ 0.47
LRFN1-201ENST00000248668 FAM205AQ6ZU69 1335 aa17.97■□□□□ 0.47
LRFN1-201ENST00000248668 COL24A1Q17RW2 1714 aa17.97■□□□□ 0.47
LRFN1-201ENST00000248668 KIF5BP33176 963 aa17.97■□□□□ 0.47
LRFN1-201ENST00000248668 RTFDC1Q9BY42 306 aaPredicted RBP17.97■□□□□ 0.47
LRFN1-201ENST00000248668 BLZF1Q9H2G9 400 aa17.97■□□□□ 0.47
LRFN1-201ENST00000248668 PFKFB3Q16875 520 aaPredicted RBP17.96■□□□□ 0.47
LRFN1-201ENST00000248668 TNFRSF25Q93038 417 aa17.96■□□□□ 0.47
LRFN1-201ENST00000248668 VAT1LQ9HCJ6 419 aa17.96■□□□□ 0.47
LRFN1-201ENST00000248668 NHSQ6T4R5 1651 aa17.96■□□□□ 0.47
LRFN1-201ENST00000248668 GTF2IP78347 998 aa17.96■□□□□ 0.47
LRFN1-201ENST00000248668 GSTO1P78417 241 aa17.96■□□□□ 0.47
LRFN1-201ENST00000248668 MXD3Q9BW11 206 aa17.96■□□□□ 0.47
LRFN1-201ENST00000248668 SLC35G1Q2M3R5 365 aa17.96■□□□□ 0.46
LRFN1-201ENST00000248668 RBM17Q96I25 401 aaKnown RBP17.96■□□□□ 0.46
LRFN1-201ENST00000248668 SAMSN1Q9NSI8 373 aaKnown RBP17.96■□□□□ 0.46
LRFN1-201ENST00000248668 TRPC5Q9UL62 973 aaPredicted RBP17.96■□□□□ 0.46
LRFN1-201ENST00000248668 ZNF831Q5JPB2 1677 aa17.96■□□□□ 0.46
LRFN1-201ENST00000248668 GSDMDP57764 484 aa17.95■□□□□ 0.46
LRFN1-201ENST00000248668 TMEM47Q9BQJ4 181 aa17.95■□□□□ 0.46
LRFN1-201ENST00000248668 ZNF579Q8NAF0 562 aaKnown RBP17.95■□□□□ 0.46
LRFN1-201ENST00000248668 OSBPL5Q9H0X9 879 aaPredicted RBP17.95■□□□□ 0.46
LRFN1-201ENST00000248668 NEMFO60524 1076 aa17.94■□□□□ 0.46
LRFN1-201ENST00000248668 RASA1P20936 1047 aa17.94■□□□□ 0.46
LRFN1-201ENST00000248668 EIF6P56537 245 aaKnown RBP17.94■□□□□ 0.46
LRFN1-201ENST00000248668 NAA30Q147X3 362 aaPredicted RBP17.94■□□□□ 0.46
LRFN1-201ENST00000248668 CEP135Q66GS9 1140 aa17.94■□□□□ 0.46
LRFN1-201ENST00000248668 TBC1D16Q8TBP0 767 aa17.94■□□□□ 0.46
LRFN1-201ENST00000248668 TAF1LQ8IZX4 1826 aa17.94■□□□□ 0.46
LRFN1-201ENST00000248668 CYTH3O43739 400 aa17.94■□□□□ 0.46
LRFN1-201ENST00000248668 LDHCP07864 332 aa17.94■□□□□ 0.46
LRFN1-201ENST00000248668 PTPN14Q15678 1187 aa17.94■□□□□ 0.46
LRFN1-201ENST00000248668 MED15Q96RN5 788 aa17.94■□□□□ 0.46
LRFN1-201ENST00000248668 PLIN2Q99541 437 aa17.94■□□□□ 0.46
LRFN1-201ENST00000248668 MAD2L2Q9UI95 211 aa17.94■□□□□ 0.46
LRFN1-201ENST00000248668 CCDC88AQ3V6T2 1871 aa17.94■□□□□ 0.46
LRFN1-201ENST00000248668 THSD7AQ9UPZ6 1657 aa17.94■□□□□ 0.46
LRFN1-201ENST00000248668 CLEC10AQ8IUN9 316 aa17.94■□□□□ 0.46
LRFN1-201ENST00000248668 PAGE5Q96GU1 130 aa17.94■□□□□ 0.46
LRFN1-201ENST00000248668 EYA3Q99504 573 aa17.94■□□□□ 0.46
LRFN1-201ENST00000248668 CDK8P49336 464 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms