RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 MYD88Q99836 296 aa20.49■□□□□ 0.87
PTPN12-201ENST00000248594 CLTAP09496 248 aa20.49■□□□□ 0.87
PTPN12-201ENST00000248594 AMPD2Q01433 879 aa20.49■□□□□ 0.87
PTPN12-201ENST00000248594 KAZALD1Q96I82 304 aa20.49■□□□□ 0.87
PTPN12-201ENST00000248594 ZC3H6P61129 1189 aaKnown RBP20.49■□□□□ 0.87
PTPN12-201ENST00000248594 NBPF14Q5TI25 921 aa20.49■□□□□ 0.87
PTPN12-201ENST00000248594 ZIM3Q96PE6 472 aa20.49■□□□□ 0.87
PTPN12-201ENST00000248594 SALL1Q9NSC2 1324 aa20.48■□□□□ 0.87
PTPN12-201ENST00000248594 HGSO14964 777 aaPredicted RBP20.48■□□□□ 0.87
PTPN12-201ENST00000248594 PLCD1P51178 756 aa20.48■□□□□ 0.87
PTPN12-201ENST00000248594 PPP1R7Q15435 360 aa20.48■□□□□ 0.87
PTPN12-201ENST00000248594 RRAGBQ5VZM2 374 aa20.48■□□□□ 0.87
PTPN12-201ENST00000248594 TRAPPC11Q7Z392 1133 aa20.48■□□□□ 0.87
PTPN12-201ENST00000248594 HPSEQ9Y251 543 aa20.48■□□□□ 0.87
PTPN12-201ENST00000248594 HIBCHQ6NVY1 386 aaPredicted RBP20.48■□□□□ 0.87
PTPN12-201ENST00000248594 NLRP14Q86W24 1093 aa20.48■□□□□ 0.87
PTPN12-201ENST00000248594 ZSCAN5CA6NGD5 496 aaPredicted RBP20.47■□□□□ 0.87
PTPN12-201ENST00000248594 FSBPO95073 299 aa20.47■□□□□ 0.87
PTPN12-201ENST00000248594 EIF4A1P60842 406 aaKnown RBP20.47■□□□□ 0.87
PTPN12-201ENST00000248594 CCDC96Q2M329 555 aa20.47■□□□□ 0.87
PTPN12-201ENST00000248594 SPRED3Q2MJR0 410 aa20.47■□□□□ 0.87
PTPN12-201ENST00000248594 MSL1Q68DK7 614 aa20.47■□□□□ 0.87
PTPN12-201ENST00000248594 UBE3BQ7Z3V4 1068 aa20.47■□□□□ 0.87
PTPN12-201ENST00000248594 AMOTL1Q8IY63 956 aa20.47■□□□□ 0.87
PTPN12-201ENST00000248594 RSRC1Q96IZ7 334 aaKnown RBP20.47■□□□□ 0.87
PTPN12-201ENST00000248594 SPATS2LQ9NUQ6 558 aaKnown RBP20.47■□□□□ 0.87
PTPN12-201ENST00000248594 TBC1D8BQ0IIM8 1120 aa20.47■□□□□ 0.87
PTPN12-201ENST00000248594 ADD3Q9UEY8 706 aaKnown RBP20.47■□□□□ 0.87
PTPN12-201ENST00000248594 ERCC3P19447 782 aa20.47■□□□□ 0.87
PTPN12-201ENST00000248594 KSR2Q6VAB6 950 aa20.47■□□□□ 0.87
PTPN12-201ENST00000248594 STAG1Q8WVM7 1258 aa20.47■□□□□ 0.87
PTPN12-201ENST00000248594 LACRTQ9GZZ8 138 aa20.47■□□□□ 0.87
PTPN12-201ENST00000248594 VCPKMTQ9H867 229 aa20.47■□□□□ 0.87
PTPN12-201ENST00000248594 PAG1Q9NWQ8 432 aa20.47■□□□□ 0.87
PTPN12-201ENST00000248594 DBF4Q9UBU7 674 aaPredicted RBP20.47■□□□□ 0.87
PTPN12-201ENST00000248594 NFU1Q9UMS0 254 aa20.47■□□□□ 0.87
PTPN12-201ENST00000248594 ZMYM6O95789 1325 aa20.46■□□□□ 0.87
PTPN12-201ENST00000248594 NR1D1P20393 614 aa20.46■□□□□ 0.87
PTPN12-201ENST00000248594 IMMTQ16891 758 aaKnown RBP20.46■□□□□ 0.87
PTPN12-201ENST00000248594 MSL3Q8N5Y2 521 aaKnown RBP20.46■□□□□ 0.87
PTPN12-201ENST00000248594 CEP170BQ9Y4F5 1589 aaPredicted RBP20.46■□□□□ 0.87
PTPN12-201ENST00000248594 C21orf2O43822 256 aa20.46■□□□□ 0.87
PTPN12-201ENST00000248594 ATP5JP18859 108 aa20.46■□□□□ 0.87
PTPN12-201ENST00000248594 HLTFQ14527 1009 aaKnown RBP eCLIP20.46■□□□□ 0.87
PTPN12-201ENST00000248594 ESCO1Q5FWF5 840 aa20.46■□□□□ 0.87
PTPN12-201ENST00000248594 FAM167BQ9BTA0 163 aa20.46■□□□□ 0.87
PTPN12-201ENST00000248594 L3MBTL1Q9Y468 752 aa20.46■□□□□ 0.87
PTPN12-201ENST00000248594 IARSP41252 1262 aaKnown RBP20.46■□□□□ 0.87
PTPN12-201ENST00000248594 SMTNP53814 917 aa20.46■□□□□ 0.87
PTPN12-201ENST00000248594 KCNB1Q14721 858 aa20.46■□□□□ 0.87
PTPN12-201ENST00000248594 KRT31Q15323 416 aa20.46■□□□□ 0.87
PTPN12-201ENST00000248594 SPATA1Q5VX52 437 aa20.46■□□□□ 0.87
PTPN12-201ENST00000248594 KBTBD3Q8NAB2 608 aa20.46■□□□□ 0.87
PTPN12-201ENST00000248594 PROCA1Q8NCQ7 364 aaPredicted RBP20.46■□□□□ 0.87
PTPN12-201ENST00000248594 ARMC2Q8NEN0 867 aa20.46■□□□□ 0.87
PTPN12-201ENST00000248594 ANKRD18BA2A2Z9 1011 aa20.45■□□□□ 0.86
PTPN12-201ENST00000248594 NEXNQ0ZGT2 675 aa20.45■□□□□ 0.86
PTPN12-201ENST00000248594 RRP12Q5JTH9 1297 aaKnown RBP20.45■□□□□ 0.86
PTPN12-201ENST00000248594 EPSTI1Q96J88 318 aa20.45■□□□□ 0.86
PTPN12-201ENST00000248594 SENP2Q9HC62 589 aa20.45■□□□□ 0.86
PTPN12-201ENST00000248594 TMOD1P28289 359 aa20.45■□□□□ 0.86
PTPN12-201ENST00000248594 NR5A1Q13285 461 aa20.45■□□□□ 0.86
PTPN12-201ENST00000248594 PTPAQ15257 358 aa20.45■□□□□ 0.86
PTPN12-201ENST00000248594 SAFBQ15424 915 aaKnown RBP eCLIP20.45■□□□□ 0.86
PTPN12-201ENST00000248594 MAEAQ7L5Y9 396 aa20.45■□□□□ 0.86
PTPN12-201ENST00000248594 STAMBPL1Q96FJ0 436 aa20.45■□□□□ 0.86
PTPN12-201ENST00000248594 GOLGB1Q14789 3259 aaKnown RBP20.44■□□□□ 0.86
PTPN12-201ENST00000248594 NCK2O43639 380 aa20.44■□□□□ 0.86
PTPN12-201ENST00000248594 DDR1Q08345 913 aa20.44■□□□□ 0.86
PTPN12-201ENST00000248594 CRYMQ14894 314 aa20.44■□□□□ 0.86
PTPN12-201ENST00000248594 PTPROQ16827 1216 aa20.44■□□□□ 0.86
PTPN12-201ENST00000248594 KRT26Q7Z3Y9 468 aa20.44■□□□□ 0.86
PTPN12-201ENST00000248594 MYCBPAPQ8TBZ2 947 aa20.44■□□□□ 0.86
PTPN12-201ENST00000248594 REXO2Q9Y3B8 237 aaKnown RBP20.44■□□□□ 0.86
PTPN12-201ENST00000248594 M0R2C6 588 aa20.44■□□□□ 0.86
PTPN12-201ENST00000248594 INCENPQ9NQS7 918 aa20.44■□□□□ 0.86
PTPN12-201ENST00000248594 LUC7L2Q9Y383 392 aaKnown RBP20.44■□□□□ 0.86
PTPN12-201ENST00000248594 KRT86O43790 486 aa20.44■□□□□ 0.86
PTPN12-201ENST00000248594 PPP1R37O75864 691 aa20.44■□□□□ 0.86
PTPN12-201ENST00000248594 IFIT1P09914 478 aaKnown RBP20.44■□□□□ 0.86
PTPN12-201ENST00000248594 MORC3Q14149 939 aa20.44■□□□□ 0.86
PTPN12-201ENST00000248594 OR2W6PQ8NHA6 318 aa20.44■□□□□ 0.86
PTPN12-201ENST00000248594 VPS54Q9P1Q0 977 aa20.44■□□□□ 0.86
PTPN12-201ENST00000248594 HPS5Q9UPZ3 1129 aa20.44■□□□□ 0.86
PTPN12-201ENST00000248594 PCDHB6Q9Y5E3 794 aa20.44■□□□□ 0.86
PTPN12-201ENST00000248594 FLT4P35916 1363 aa20.44■□□□□ 0.86
PTPN12-201ENST00000248594 hCG_1642624A0A1W2PR95 340 aa20.43■□□□□ 0.86
PTPN12-201ENST00000248594 C1orf141Q5JVX7 400 aa20.43■□□□□ 0.86
PTPN12-201ENST00000248594 NFRKBQ6P4R8 1299 aa20.43■□□□□ 0.86
PTPN12-201ENST00000248594 NSMCE1Q8WV22 266 aa20.43■□□□□ 0.86
PTPN12-201ENST00000248594 EPN3Q9H201 632 aa20.43■□□□□ 0.86
PTPN12-201ENST00000248594 TTC26A0AVF1 554 aa20.43■□□□□ 0.86
PTPN12-201ENST00000248594 C8orf74Q6P047 294 aa20.43■□□□□ 0.86
PTPN12-201ENST00000248594 FUKQ8N0W3 1084 aa20.43■□□□□ 0.86
PTPN12-201ENST00000248594 CSRNP2Q9H175 543 aa20.43■□□□□ 0.86
PTPN12-201ENST00000248594 CAND2O75155 1236 aa20.43■□□□□ 0.86
PTPN12-201ENST00000248594 ANKRD24Q8TF21 1146 aa20.43■□□□□ 0.86
PTPN12-201ENST00000248594 SH3GL2Q99962 352 aa20.43■□□□□ 0.86
PTPN12-201ENST00000248594 MAST3O60307 1309 aa20.43■□□□□ 0.86
PTPN12-201ENST00000248594 TUBGCP6Q96RT7 1819 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms