RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 IFNAR1P17181 557 aa15.02□□□□□ -0.01
HIF3A-201ENST00000244302 ECE1P42892 770 aa15.02□□□□□ -0.01
HIF3A-201ENST00000244302 PRKG1Q13976 671 aa15.02□□□□□ -0.01
HIF3A-201ENST00000244302 ABCB5Q2M3G0 1257 aa15.02□□□□□ -0.01
HIF3A-201ENST00000244302 FKBP1CQ5VVH2 108 aa15.02□□□□□ -0.01
HIF3A-201ENST00000244302 MCTP1Q6DN14 999 aa15.02□□□□□ -0.01
HIF3A-201ENST00000244302 GLIS2Q9BZE0 524 aaPredicted RBP15.02□□□□□ -0.01
HIF3A-201ENST00000244302 POTECB2RU33 542 aa15.01□□□□□ -0.01
HIF3A-201ENST00000244302 DHX16O60231 1041 aaKnown RBP15.01□□□□□ -0.01
HIF3A-201ENST00000244302 PKN1Q16512 942 aa15.01□□□□□ -0.01
HIF3A-201ENST00000244302 TTBK2Q6IQ55 1244 aa15.01□□□□□ -0.01
HIF3A-201ENST00000244302 TMTC3Q6ZXV5 915 aa15.01□□□□□ -0.01
HIF3A-201ENST00000244302 ACER1Q8TDN7 264 aa15.01□□□□□ -0.01
HIF3A-201ENST00000244302 ALG1Q9BT22 464 aa15.01□□□□□ -0.01
HIF3A-201ENST00000244302 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.01□□□□□ -0.01
HIF3A-201ENST00000244302 KCNJ14Q9UNX9 436 aa15.01□□□□□ -0.01
HIF3A-201ENST00000244302 WDR33Q9C0J8 1336 aaKnown RBP15.01□□□□□ -0.01
HIF3A-201ENST00000244302 HMGN5P82970 282 aaKnown RBP15.01□□□□□ -0.01
HIF3A-201ENST00000244302 SSRP1Q08945 709 aaKnown RBP15.01□□□□□ -0.01
HIF3A-201ENST00000244302 KIAA1755Q5JYT7 1200 aa15.01□□□□□ -0.01
HIF3A-201ENST00000244302 CLEC17AQ6ZS10 378 aa15.01□□□□□ -0.01
HIF3A-201ENST00000244302 PHF20L1A8MW92 1017 aa15□□□□□ -0.01
HIF3A-201ENST00000244302 H3BQV1 296 aa15□□□□□ -0.01
HIF3A-201ENST00000244302 DDAH1O94760 285 aa15□□□□□ -0.01
HIF3A-201ENST00000244302 FMNL1O95466 1100 aaPredicted RBP15□□□□□ -0.01
HIF3A-201ENST00000244302 TTLL1O95922 423 aa15□□□□□ -0.01
HIF3A-201ENST00000244302 POTEIP0CG38 1075 aa15□□□□□ -0.01
HIF3A-201ENST00000244302 POTEJP0CG39 1038 aa15□□□□□ -0.01
HIF3A-201ENST00000244302 TOP1P11387 765 aaKnown RBP15□□□□□ -0.01
HIF3A-201ENST00000244302 DNM1Q05193 864 aaKnown RBP15□□□□□ -0.01
HIF3A-201ENST00000244302 DGKZQ13574 1117 aa15□□□□□ -0.01
HIF3A-201ENST00000244302 IFFO2Q5TF58 517 aa15□□□□□ -0.01
HIF3A-201ENST00000244302 CTCFLQ8NI51 663 aaPredicted RBP15□□□□□ -0.01
HIF3A-201ENST00000244302 NUP88Q99567 741 aaPredicted RBP15□□□□□ -0.01
HIF3A-201ENST00000244302 VAT1LQ9HCJ6 419 aa15□□□□□ -0.01
HIF3A-201ENST00000244302 KIF28PB7ZC32 967 aa14.99□□□□□ -0.01
HIF3A-201ENST00000244302 ADM5C9JUS6 153 aa14.99□□□□□ -0.01
HIF3A-201ENST00000244302 NID2Q14112 1375 aa14.99□□□□□ -0.01
HIF3A-201ENST00000244302 GRM4Q14833 912 aa14.99□□□□□ -0.01
HIF3A-201ENST00000244302 C8orf76Q96K31 380 aa14.99□□□□□ -0.01
HIF3A-201ENST00000244302 FTOQ9C0B1 505 aaKnown RBP eCLIP14.99□□□□□ -0.01
HIF3A-201ENST00000244302 GPCPD1Q9NPB8 672 aa14.99□□□□□ -0.01
HIF3A-201ENST00000244302 TFIP11Q9UBB9 837 aaKnown RBP14.99□□□□□ -0.01
HIF3A-201ENST00000244302 CNPY2Q9Y2B0 182 aa14.99□□□□□ -0.01
HIF3A-201ENST00000244302 PLIN4Q96Q06 1357 aa14.99□□□□□ -0.01
HIF3A-201ENST00000244302 PALM3A6NDB9 673 aaPredicted RBP14.99□□□□□ -0.01
HIF3A-201ENST00000244302 PDHBP11177 359 aa14.99□□□□□ -0.01
HIF3A-201ENST00000244302 INPP5BP32019 993 aa14.99□□□□□ -0.01
HIF3A-201ENST00000244302 SLC16A2P36021 539 aa14.99□□□□□ -0.01
HIF3A-201ENST00000244302 KCTD1Q719H9 257 aa14.99□□□□□ -0.01
HIF3A-201ENST00000244302 SPICE1Q8N0Z3 855 aa14.99□□□□□ -0.01
HIF3A-201ENST00000244302 CCDC17Q96LX7 622 aa14.99□□□□□ -0.01
HIF3A-201ENST00000244302 HERC5Q9UII4 1024 aaKnown RBP14.99□□□□□ -0.01
HIF3A-201ENST00000244302 MYH8P13535 1937 aa14.99□□□□□ -0.01
HIF3A-201ENST00000244302 CNTNAP5Q8WYK1 1306 aa14.98□□□□□ -0.01
HIF3A-201ENST00000244302 TNNI2P48788 182 aa14.98□□□□□ -0.01
HIF3A-201ENST00000244302 ICA1Q05084 483 aa14.98□□□□□ -0.01
HIF3A-201ENST00000244302 FMR1Q06787 632 aaKnown RBP eCLIP14.98□□□□□ -0.01
HIF3A-201ENST00000244302 RESTQ13127 1097 aa14.98□□□□□ -0.01
HIF3A-201ENST00000244302 ZYXQ15942 572 aaKnown RBP14.98□□□□□ -0.01
HIF3A-201ENST00000244302 FBXO18Q8NFZ0 1043 aa14.98□□□□□ -0.01
HIF3A-201ENST00000244302 ZKSCAN4Q969J2 545 aaPredicted RBP14.98□□□□□ -0.01
HIF3A-201ENST00000244302 ADARB2Q9NS39 739 aaKnown RBP14.98□□□□□ -0.01
HIF3A-201ENST00000244302 VPS54Q9P1Q0 977 aa14.98□□□□□ -0.01
HIF3A-201ENST00000244302 TCHHQ07283 1943 aa14.98□□□□□ -0.01
HIF3A-201ENST00000244302 KLRF2D3W0D1 207 aa14.98□□□□□ -0.01
HIF3A-201ENST00000244302 GRIN3BO60391 1043 aa14.98□□□□□ -0.01
HIF3A-201ENST00000244302 LMOD1P29536 600 aaPredicted RBP14.98□□□□□ -0.01
HIF3A-201ENST00000244302 KRT40Q6A162 431 aa14.98□□□□□ -0.01
HIF3A-201ENST00000244302 DPY19L2Q6NUT2 758 aa14.98□□□□□ -0.01
HIF3A-201ENST00000244302 GPKOWQ92917 476 aaPredicted RBP eCLIP14.98□□□□□ -0.01
HIF3A-201ENST00000244302 GRPEL1Q9HAV7 217 aa14.98□□□□□ -0.01
HIF3A-201ENST00000244302 GLTPD2A6NH11 291 aa14.97□□□□□ -0.01
HIF3A-201ENST00000244302 GOLGA6L22H0YM25 854 aa14.97□□□□□ -0.01
HIF3A-201ENST00000244302 PRPF40AO75400 957 aaKnown RBP14.97□□□□□ -0.01
HIF3A-201ENST00000244302 CALM1P0DP23 149 aa14.97□□□□□ -0.01
HIF3A-201ENST00000244302 CALM2P0DP24 149 aa14.97□□□□□ -0.01
HIF3A-201ENST00000244302 CALM3P0DP25 149 aa14.97□□□□□ -0.01
HIF3A-201ENST00000244302 PDCP20941 246 aa14.97□□□□□ -0.01
HIF3A-201ENST00000244302 CAP2P40123 477 aa14.97□□□□□ -0.01
HIF3A-201ENST00000244302 MAP3K10Q02779 954 aa14.97□□□□□ -0.01
HIF3A-201ENST00000244302 NOM1Q5C9Z4 860 aaKnown RBP14.97□□□□□ -0.01
HIF3A-201ENST00000244302 CPLX2Q6PUV4 134 aaKnown RBP14.97□□□□□ -0.01
HIF3A-201ENST00000244302 TMEM179Q6ZVK1 233 aa14.97□□□□□ -0.01
HIF3A-201ENST00000244302 OXER1Q8TDS5 423 aa14.97□□□□□ -0.01
HIF3A-201ENST00000244302 KANSL2Q9H9L4 492 aa14.97□□□□□ -0.01
HIF3A-201ENST00000244302 ZBTB21Q9ULJ3 1066 aa14.97□□□□□ -0.01
HIF3A-201ENST00000244302 CCDC196A0A1B0GTZ2 297 aa14.96□□□□□ -0.01
HIF3A-201ENST00000244302 TBC1D12O60347 775 aa14.96□□□□□ -0.01
HIF3A-201ENST00000244302 CDKL5O76039 1030 aa14.96□□□□□ -0.01
HIF3A-201ENST00000244302 RCAN1P53805 252 aa14.96□□□□□ -0.01
HIF3A-201ENST00000244302 SNAP25P60880 206 aa14.96□□□□□ -0.01
HIF3A-201ENST00000244302 CEBPZQ03701 1054 aaKnown RBP14.96□□□□□ -0.01
HIF3A-201ENST00000244302 TNFAIP1Q13829 316 aa14.96□□□□□ -0.01
HIF3A-201ENST00000244302 EAPPQ56P03 285 aaPredicted RBP14.96□□□□□ -0.01
HIF3A-201ENST00000244302 TYW1BQ6NUM6 668 aa14.96□□□□□ -0.01
HIF3A-201ENST00000244302 COL2A1P02458 1487 aaPredicted RBP14.96□□□□□ -0.01
HIF3A-201ENST00000244302 PARP1P09874 1014 aaKnown RBP14.96□□□□□ -0.01
HIF3A-201ENST00000244302 NCLP19338 710 aaKnown RBP14.96□□□□□ -0.01
HIF3A-201ENST00000244302 EPHX2P34913 555 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms