RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CERKLQ49MI3 558 aaPredicted RBP17.61■□□□□ 0.41
HDHD3-201ENST00000238379 MYSM1Q5VVJ2 828 aa17.61■□□□□ 0.41
HDHD3-201ENST00000238379 DPF2Q92785 391 aa17.61■□□□□ 0.41
HDHD3-201ENST00000238379 CSRNP1Q96S65 589 aa17.61■□□□□ 0.41
HDHD3-201ENST00000238379 FTOQ9C0B1 505 aaKnown RBP eCLIP17.61■□□□□ 0.41
HDHD3-201ENST00000238379 RCOR1Q9UKL0 485 aa17.61■□□□□ 0.41
HDHD3-201ENST00000238379 KCNJ14Q9UNX9 436 aa17.61■□□□□ 0.41
HDHD3-201ENST00000238379 MYH6P13533 1939 aa17.6■□□□□ 0.41
HDHD3-201ENST00000238379 MPHOSPH10O00566 681 aaKnown RBP17.6■□□□□ 0.41
HDHD3-201ENST00000238379 TTLL1O95922 423 aa17.6■□□□□ 0.41
HDHD3-201ENST00000238379 GMPSP49915 693 aaPredicted RBP17.6■□□□□ 0.41
HDHD3-201ENST00000238379 RASGRP2Q7LDG7 609 aa17.6■□□□□ 0.41
HDHD3-201ENST00000238379 FAM83AQ86UY5 434 aa17.6■□□□□ 0.41
HDHD3-201ENST00000238379 TRIM34Q9BYJ4 488 aa17.6■□□□□ 0.41
HDHD3-201ENST00000238379 MTMR7Q9Y216 660 aa17.6■□□□□ 0.41
HDHD3-201ENST00000238379 MYO1BO43795 1136 aa17.59■□□□□ 0.41
HDHD3-201ENST00000238379 CEBPZQ03701 1054 aaKnown RBP17.59■□□□□ 0.41
HDHD3-201ENST00000238379 ARHGAP27Q6ZUM4 889 aa17.59■□□□□ 0.41
HDHD3-201ENST00000238379 VEZTQ9HBM0 779 aa17.59■□□□□ 0.41
HDHD3-201ENST00000238379 TMEM63CQ9P1W3 806 aa17.59■□□□□ 0.41
HDHD3-201ENST00000238379 RBM27Q9P2N5 1060 aaKnown RBP17.59■□□□□ 0.41
HDHD3-201ENST00000238379 CLIP2Q9UDT6 1046 aa17.59■□□□□ 0.41
HDHD3-201ENST00000238379 BAZ2BQ9UIF8 2168 aaKnown RBP17.59■□□□□ 0.41
HDHD3-201ENST00000238379 KLRF2D3W0D1 207 aa17.58■□□□□ 0.41
HDHD3-201ENST00000238379 CYTH3O43739 400 aa17.58■□□□□ 0.41
HDHD3-201ENST00000238379 EGFRP00533 1210 aa17.58■□□□□ 0.41
HDHD3-201ENST00000238379 GOLGA8HP0CJ92 632 aa17.58■□□□□ 0.41
HDHD3-201ENST00000238379 XBP1P17861 261 aa17.58■□□□□ 0.41
HDHD3-201ENST00000238379 PFKFB3Q16875 520 aaPredicted RBP17.58■□□□□ 0.41
HDHD3-201ENST00000238379 SHROOM1Q2M3G4 852 aaPredicted RBP17.58■□□□□ 0.41
HDHD3-201ENST00000238379 USP17L2Q6R6M4 530 aa17.58■□□□□ 0.41
HDHD3-201ENST00000238379 DIS3L2Q8IYB7 885 aaKnown RBP17.58■□□□□ 0.41
HDHD3-201ENST00000238379 LZTS2Q9BRK4 669 aa17.58■□□□□ 0.41
HDHD3-201ENST00000238379 PHF20Q9BVI0 1012 aa17.58■□□□□ 0.41
HDHD3-201ENST00000238379 RTEL1Q9NZ71 1219 aa17.58■□□□□ 0.41
HDHD3-201ENST00000238379 VPS54Q9P1Q0 977 aa17.58■□□□□ 0.41
HDHD3-201ENST00000238379 HERC5Q9UII4 1024 aaKnown RBP17.58■□□□□ 0.41
HDHD3-201ENST00000238379 GJA3Q9Y6H8 435 aa17.58■□□□□ 0.41
HDHD3-201ENST00000238379 ZNF541Q9H0D2 1346 aa17.58■□□□□ 0.4
HDHD3-201ENST00000238379 BTBD18B2RXH4 712 aa17.58■□□□□ 0.4
HDHD3-201ENST00000238379 PARP1P09874 1014 aaKnown RBP17.58■□□□□ 0.4
HDHD3-201ENST00000238379 SNHG28P0DPA3 235 aa17.58■□□□□ 0.4
HDHD3-201ENST00000238379 PDHBP11177 359 aa17.58■□□□□ 0.4
HDHD3-201ENST00000238379 SCG2P13521 617 aa17.58■□□□□ 0.4
HDHD3-201ENST00000238379 SAFBQ15424 915 aaKnown RBP eCLIP17.58■□□□□ 0.4
HDHD3-201ENST00000238379 PPP4R3BQ5MIZ7 849 aa17.58■□□□□ 0.4
HDHD3-201ENST00000238379 LRRC47Q8N1G4 583 aaKnown RBP17.58■□□□□ 0.4
HDHD3-201ENST00000238379 PGBD1Q96JS3 809 aa17.58■□□□□ 0.4
HDHD3-201ENST00000238379 SYT17Q9BSW7 474 aa17.58■□□□□ 0.4
HDHD3-201ENST00000238379 FOXP1Q9H334 677 aaPredicted RBP17.58■□□□□ 0.4
HDHD3-201ENST00000238379 USP17L5A8MUK1 530 aa17.57■□□□□ 0.4
HDHD3-201ENST00000238379 VEGFAP15692 232 aaPredicted RBP17.57■□□□□ 0.4
HDHD3-201ENST00000238379 LMNB1P20700 586 aa17.57■□□□□ 0.4
HDHD3-201ENST00000238379 GNL2Q13823 731 aaKnown RBP17.57■□□□□ 0.4
HDHD3-201ENST00000238379 ILDR2Q71H61 639 aa17.57■□□□□ 0.4
HDHD3-201ENST00000238379 NOSTRINQ8IVI9 506 aa17.57■□□□□ 0.4
HDHD3-201ENST00000238379 MICALL2Q8IY33 904 aa17.57■□□□□ 0.4
HDHD3-201ENST00000238379 TMEM39BQ9GZU3 492 aa17.57■□□□□ 0.4
HDHD3-201ENST00000238379 KANSL2Q9H9L4 492 aa17.57■□□□□ 0.4
HDHD3-201ENST00000238379 POLR3EQ9NVU0 708 aa17.57■□□□□ 0.4
HDHD3-201ENST00000238379 PGAP2Q9UHJ9 254 aa17.57■□□□□ 0.4
HDHD3-201ENST00000238379 CNOT7Q9UIV1 285 aaKnown RBP17.57■□□□□ 0.4
HDHD3-201ENST00000238379 SMARCA1P28370 1054 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 RRP1BQ14684 758 aaKnown RBP17.56■□□□□ 0.4
HDHD3-201ENST00000238379 ZSCAN23Q3MJ62 389 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 RBM26Q5T8P6 1007 aaKnown RBP17.56■□□□□ 0.4
HDHD3-201ENST00000238379 TMEM179Q6ZVK1 233 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 MKL1Q969V6 931 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 SPZ1Q9BXG8 430 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.56■□□□□ 0.46e-7■■□□□ 14.2
HDHD3-201ENST00000238379 NYAP2Q9P242 653 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 GDF11O95390 407 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 NASPP49321 788 aaPredicted RBP17.56■□□□□ 0.4
HDHD3-201ENST00000238379 JAG1P78504 1218 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 SEPT2Q15019 361 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 NPY5RQ15761 445 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 ABCB5Q2M3G0 1257 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 TPRNQ4KMQ1 711 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 SIAH1Q8IUQ4 282 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 CDAN1Q8IWY9 1227 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 LINC00301Q8NCQ3 95 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 OXER1Q8TDS5 423 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 PIBF1Q8WXW3 757 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 CLIC4Q9Y696 253 aa17.56■□□□□ 0.4
HDHD3-201ENST00000238379 EEF2P13639 858 aaKnown RBP17.55■□□□□ 0.4
HDHD3-201ENST00000238379 NR5A1Q13285 461 aa17.55■□□□□ 0.4
HDHD3-201ENST00000238379 SAMD7Q7Z3H4 446 aa17.55■□□□□ 0.4
HDHD3-201ENST00000238379 CPVLQ9H3G5 476 aa17.55■□□□□ 0.4
HDHD3-201ENST00000238379 TBC1D12O60347 775 aa17.54■□□□□ 0.4
HDHD3-201ENST00000238379 YEATS4O95619 227 aa17.54■□□□□ 0.4
HDHD3-201ENST00000238379 ATP2B2Q01814 1243 aa17.54■□□□□ 0.4
HDHD3-201ENST00000238379 ASPRV1Q53RT3 343 aa17.54■□□□□ 0.4
HDHD3-201ENST00000238379 ANO1Q5XXA6 986 aa17.54■□□□□ 0.4
HDHD3-201ENST00000238379 GOLGA6L4A6NEF3 574 aa17.54■□□□□ 0.4
HDHD3-201ENST00000238379 GH2P01242 217 aa17.54■□□□□ 0.4
HDHD3-201ENST00000238379 ZNF445P59923 1031 aa17.54■□□□□ 0.4
HDHD3-201ENST00000238379 ZNF543Q08ER8 600 aa17.54■□□□□ 0.4
HDHD3-201ENST00000238379 TBC1D10BQ4KMP7 808 aaPredicted RBP17.54■□□□□ 0.4
HDHD3-201ENST00000238379 SH3GLB2Q9NR46 395 aa17.54■□□□□ 0.4
HDHD3-201ENST00000238379 DICER1Q9UPY3 1922 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms