RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 CCDC170Q8IYT3 715 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 RAB42Q8N4Z0 105 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 URGCPQ8TCY9 931 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 MAGEF1Q9HAY2 307 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 MAN1A1P33908 653 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 INTS8Q75QN2 995 aaKnown RBP8.19□□□□□ -1.1
MED28-201ENST00000237380 C2CD5Q86YS7 1000 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 SSH1Q8WYL5 1049 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 PRIMPOLQ96LW4 560 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 DDX21Q9NR30 783 aaKnown RBP eCLIP8.19□□□□□ -1.1
MED28-201ENST00000237380 LEMD3Q9Y2U8 911 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 AFMP43652 599 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 CEBPAP49715 358 aaPredicted RBP8.19□□□□□ -1.1
MED28-201ENST00000237380 LACTBP83111 547 aaPredicted RBP8.19□□□□□ -1.1
MED28-201ENST00000237380 THEM5Q8N1Q8 247 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 ATP6V0A1Q93050 837 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 RAB17Q9H0T7 212 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 ZSCAN22P10073 491 aaPredicted RBP8.19□□□□□ -1.1
MED28-201ENST00000237380 LIG4P49917 911 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 SEC62Q99442 399 aaKnown RBP8.19□□□□□ -1.1
MED28-201ENST00000237380 MRPL44Q9H9J2 332 aaKnown RBP8.19□□□□□ -1.1
MED28-201ENST00000237380 RIC8AQ9NPQ8 531 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 IQCA1LA6NCM1 817 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 hCG_1984214I3L0E3 225 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 PPP1R21Q6ZMI0 780 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 TRIM42Q8IWZ5 723 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 CDKL2Q92772 493 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 DDX50Q9BQ39 737 aaKnown RBP8.19□□□□□ -1.1
MED28-201ENST00000237380 LBHD1Q9BQE6 289 aaPredicted RBP8.19□□□□□ -1.1
MED28-201ENST00000237380 TEKT3Q9BXF9 490 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 SETD1BQ9UPS6 1966 aaKnown RBP8.19□□□□□ -1.1
MED28-201ENST00000237380 AOX1Q06278 1338 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 SYCP2Q9BX26 1530 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 CALR3Q96L12 384 aaKnown RBP8.18□□□□□ -1.1
MED28-201ENST00000237380 EDC4Q6P2E9 1401 aaKnown RBP8.18□□□□□ -1.1
MED28-201ENST00000237380 KDM2BQ8NHM5 1336 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 TRAF5O00463 557 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 HAND2P61296 217 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 RNF219Q5W0B1 726 aaPredicted RBP8.18□□□□□ -1.1
MED28-201ENST00000237380 RUFY4Q6ZNE9 571 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 GTF3C2Q8WUA4 911 aaPredicted RBP8.18□□□□□ -1.1
MED28-201ENST00000237380 RSAD2Q8WXG1 361 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 ZFYVE16Q7Z3T8 1539 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 MED7O43513 233 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 KRT19P08727 400 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 ATP8B2P98198 1209 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 SP4Q02446 784 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 GINS2Q9Y248 185 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 PRKCQQ04759 706 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 ARMCX2Q7L311 632 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 STAM2O75886 525 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 GNG11P61952 73 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 MTMR3Q13615 1198 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 DALRD3Q5D0E6 543 aaKnown RBP8.18□□□□□ -1.1
MED28-201ENST00000237380 MYCT1Q8N699 235 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 ERBB4Q15303 1308 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 HSPA1LP34931 641 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 GJC1P36383 396 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 Q6ZUG5 572 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 KIF2CQ99661 725 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 APPBP2Q92624 585 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 PPP1R12CQ9BZL4 782 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 TTC36A6NLP5 189 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 POLGP54098 1239 aaPredicted RBP8.18□□□□□ -1.1
MED28-201ENST00000237380 MYO1EQ12965 1108 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 MIER3Q7Z3K6 550 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 CUEDC2Q9H467 287 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 GPCPD1Q9NPB8 672 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 EHD2Q9NZN4 543 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 PCDHB8Q9UN66 801 aa8.18□□□□□ -1.1
MED28-201ENST00000237380 RNMTO43148 476 aaKnown RBP8.17□□□□□ -1.1
MED28-201ENST00000237380 GCNT3O95395 438 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 HDAC1Q13547 482 aaPredicted RBP8.17□□□□□ -1.1
MED28-201ENST00000237380 METTL22Q9BUU2 404 aaPredicted RBP8.17□□□□□ -1.1
MED28-201ENST00000237380 ZNF853P0CG23 659 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 TNNI1P19237 187 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 ITGA6P23229 1130 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 NCAPG2Q86XI2 1143 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 NUB1Q9Y5A7 615 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 CCND2P30279 289 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 RAPGEF1Q13905 1077 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 PTPRKQ15262 1439 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 SNRKQ9NRH2 765 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 A6NJR5 290 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 CDC42EP1Q00587 391 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 WASHC5Q12768 1159 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 PODNQ7Z5L7 613 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 NOC4LQ9BVI4 516 aaKnown RBP8.17□□□□□ -1.1
MED28-201ENST00000237380 SLAIN2Q9P270 581 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 LAD1O00515 517 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 GRIN3BO60391 1043 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 REXO1Q8N1G1 1221 aaKnown RBP8.17□□□□□ -1.1
MED28-201ENST00000237380 METTL14Q9HCE5 456 aaKnown RBP8.17□□□□□ -1.1
MED28-201ENST00000237380 NEO1Q92859 1461 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 IGBP1P78318 339 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 APOBRQ0VD83 1088 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 KYAT1Q16773 422 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 LETM2Q2VYF4 491 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 CCDC93Q567U6 631 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 CCDC160A6NGH7 325 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms