RNA–Protein interactions for RNA: ENST00000234389.3

GRIN3B-201, Transcript of glutamate ionotropic receptor NMDA type subunit 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRIN3B, Length 3,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3B-201ENST00000234389 RNF41Q9H4P4 317 aaPredicted RBP20.52■□□□□ 0.88
GRIN3B-201ENST00000234389 A0A1W2PQ27 194 aa20.52■□□□□ 0.88
GRIN3B-201ENST00000234389 A0A1W2PQ64 194 aa20.52■□□□□ 0.88
GRIN3B-201ENST00000234389 A0A1W2PQD8 194 aa20.52■□□□□ 0.88
GRIN3B-201ENST00000234389 MCM6Q14566 821 aa20.52■□□□□ 0.88
GRIN3B-201ENST00000234389 PTPAQ15257 358 aa20.52■□□□□ 0.88
GRIN3B-201ENST00000234389 MEX3CQ5U5Q3 659 aaKnown RBP20.52■□□□□ 0.88
GRIN3B-201ENST00000234389 NBPF11Q86T75 865 aa20.52■□□□□ 0.88
GRIN3B-201ENST00000234389 TGFBRAP1Q8WUH2 860 aa20.52■□□□□ 0.88
GRIN3B-201ENST00000234389 PARP4Q9UKK3 1724 aaKnown RBP20.51■□□□□ 0.87
GRIN3B-201ENST00000234389 IFNAR1P17181 557 aa20.51■□□□□ 0.87
GRIN3B-201ENST00000234389 SAMSN1Q9NSI8 373 aaKnown RBP20.51■□□□□ 0.87
GRIN3B-201ENST00000234389 RTCBQ9Y3I0 505 aaKnown RBP20.51■□□□□ 0.87
GRIN3B-201ENST00000234389 ECM2O94769 699 aaPredicted RBP20.51■□□□□ 0.87
GRIN3B-201ENST00000234389 ATP2B2Q01814 1243 aa20.51■□□□□ 0.87
GRIN3B-201ENST00000234389 ARHGEF1Q92888 912 aaKnown RBP20.51■□□□□ 0.87
GRIN3B-201ENST00000234389 CARD6Q9BX69 1037 aa20.51■□□□□ 0.87
GRIN3B-201ENST00000234389 ZSWIM4Q9H7M6 989 aa20.51■□□□□ 0.87
GRIN3B-201ENST00000234389 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.51■□□□□ 0.87
GRIN3B-201ENST00000234389 SLURP2P0DP57 97 aa20.51■□□□□ 0.87
GRIN3B-201ENST00000234389 REXO1L1PQ8IX06 675 aa20.51■□□□□ 0.87
GRIN3B-201ENST00000234389 CTCFLQ8NI51 663 aaPredicted RBP20.51■□□□□ 0.87
GRIN3B-201ENST00000234389 MAP3K14Q99558 947 aa20.51■□□□□ 0.87
GRIN3B-201ENST00000234389 DEXIO95424 95 aa20.5■□□□□ 0.87
GRIN3B-201ENST00000234389 LIFRP42702 1097 aa20.5■□□□□ 0.87
GRIN3B-201ENST00000234389 TFAP4Q01664 338 aa20.5■□□□□ 0.87
GRIN3B-201ENST00000234389 MCTP2Q6DN12 878 aa20.5■□□□□ 0.87
GRIN3B-201ENST00000234389 ARMCX5Q6P1M9 558 aa20.5■□□□□ 0.87
GRIN3B-201ENST00000234389 RPAINQ86UA6 219 aa20.5■□□□□ 0.87
GRIN3B-201ENST00000234389 NFE2L3Q9Y4A8 694 aa20.5■□□□□ 0.87
GRIN3B-201ENST00000234389 SLIT2O94813 1529 aa20.5■□□□□ 0.87
GRIN3B-201ENST00000234389 ATL3Q6DD88 541 aa20.5■□□□□ 0.87
GRIN3B-201ENST00000234389 TPTE2Q6XPS3 522 aa20.5■□□□□ 0.87
GRIN3B-201ENST00000234389 FAM196AQ6ZSG2 479 aa20.5■□□□□ 0.87
GRIN3B-201ENST00000234389 SGMS1Q86VZ5 419 aa20.5■□□□□ 0.87
GRIN3B-201ENST00000234389 SRRTQ9BXP5 876 aaKnown RBP20.5■□□□□ 0.87
GRIN3B-201ENST00000234389 PICALMQ13492 652 aa20.49■□□□□ 0.87
GRIN3B-201ENST00000234389 LRCH2Q5VUJ6 765 aa20.49■□□□□ 0.87
GRIN3B-201ENST00000234389 STAG1Q8WVM7 1258 aa20.49■□□□□ 0.87
GRIN3B-201ENST00000234389 PPM1EQ8WY54 764 aa20.49■□□□□ 0.87
GRIN3B-201ENST00000234389 SHISA4Q96DD7 197 aa20.49■□□□□ 0.87
GRIN3B-201ENST00000234389 XIRP1Q702N8 1843 aaKnown RBP20.49■□□□□ 0.87
GRIN3B-201ENST00000234389 CCDC196A0A1B0GTZ2 297 aa20.49■□□□□ 0.87
GRIN3B-201ENST00000234389 TULP1O00294 542 aaPredicted RBP20.49■□□□□ 0.87
GRIN3B-201ENST00000234389 BMP6P22004 513 aa20.49■□□□□ 0.87
GRIN3B-201ENST00000234389 FMR1Q06787 632 aaKnown RBP eCLIP20.49■□□□□ 0.87
GRIN3B-201ENST00000234389 NYAP1Q6ZVC0 841 aa20.49■□□□□ 0.87
GRIN3B-201ENST00000234389 GNAT2P19087 354 aa20.49■□□□□ 0.87
GRIN3B-201ENST00000234389 BIRC2Q13490 618 aa20.49■□□□□ 0.87
GRIN3B-201ENST00000234389 STAG2Q8N3U4 1231 aa20.49■□□□□ 0.87
GRIN3B-201ENST00000234389 DESI2Q9BSY9 194 aa20.49■□□□□ 0.87
GRIN3B-201ENST00000234389 TOP1P11387 765 aaKnown RBP20.48■□□□□ 0.87
GRIN3B-201ENST00000234389 POSTNQ15063 836 aa20.48■□□□□ 0.87
GRIN3B-201ENST00000234389 RIOK1Q9BRS2 568 aaKnown RBP20.48■□□□□ 0.87
GRIN3B-201ENST00000234389 NWD2Q9ULI1 1742 aa20.48■□□□□ 0.87
GRIN3B-201ENST00000234389 TRIM75PA6NK02 468 aa20.48■□□□□ 0.87
GRIN3B-201ENST00000234389 C6orf229H3BNL8 230 aa20.48■□□□□ 0.87
GRIN3B-201ENST00000234389 WASF1Q92558 559 aa20.48■□□□□ 0.87
GRIN3B-201ENST00000234389 MRFAP1L1Q96HT8 127 aa20.48■□□□□ 0.87
GRIN3B-201ENST00000234389 BSDC1Q9NW68 430 aaPredicted RBP20.48■□□□□ 0.87
GRIN3B-201ENST00000234389 MYL5Q02045 173 aa20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 XBP1P17861 261 aa20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 CCT6AP40227 531 aaKnown RBP20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 CCZ1BP86790 482 aa20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 CCZ1P86791 482 aaPredicted RBP20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 HEATR3Q7Z4Q2 680 aa20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 SLC24A3Q9HC58 644 aa20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 DCP1AQ9NPI6 582 aaPredicted RBP20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 ZNF804BA4D1E1 1349 aa20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 SPATA31A5Q5VU36 1347 aa20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 SPATA31A7Q8IWB4 1347 aa20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 PLEKHG2Q9H7P9 1386 aa20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 NCAPHQ15003 741 aa20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 CLEC10AQ8IUN9 316 aa20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 SRBD1Q8N5C6 995 aaKnown RBP20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 SYMPKQ92797 1274 aaKnown RBP20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 SMARCC1Q92922 1105 aaPredicted RBP20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 NSUN4Q96CB9 384 aaKnown RBP20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 ZNF512BQ96KM6 892 aaPredicted RBP20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 CRNKL1Q9BZJ0 848 aaKnown RBP20.47■□□□□ 0.87
GRIN3B-201ENST00000234389 IRF6O14896 467 aa20.46■□□□□ 0.87
GRIN3B-201ENST00000234389 PTGDRQ13258 359 aa20.46■□□□□ 0.87
GRIN3B-201ENST00000234389 SH3RF3Q8TEJ3 882 aaPredicted RBP20.46■□□□□ 0.87
GRIN3B-201ENST00000234389 USP21Q9UK80 565 aa20.46■□□□□ 0.87
GRIN3B-201ENST00000234389 NUP188Q5SRE5 1749 aa20.46■□□□□ 0.87
GRIN3B-201ENST00000234389 LAMB4A4D0S4 1761 aa20.46■□□□□ 0.87
GRIN3B-201ENST00000234389 A0A087X0B3 334 aa20.46■□□□□ 0.87
GRIN3B-201ENST00000234389 PP2D1A8MPX8 630 aa20.46■□□□□ 0.87
GRIN3B-201ENST00000234389 ZRANB2O95218 330 aaKnown RBP eCLIP20.46■□□□□ 0.87
GRIN3B-201ENST00000234389 RESP18Q5W5W9 173 aa20.46■□□□□ 0.87
GRIN3B-201ENST00000234389 AKAP11Q9UKA4 1901 aa20.46■□□□□ 0.87
GRIN3B-201ENST00000234389 SCP2P22307 547 aa20.45■□□□□ 0.86
GRIN3B-201ENST00000234389 KARSQ15046 597 aaKnown RBP20.45■□□□□ 0.86
GRIN3B-201ENST00000234389 MAN1B1Q9UKM7 699 aa20.45■□□□□ 0.86
GRIN3B-201ENST00000234389 COL4A1P02462 1669 aa20.45■□□□□ 0.86
GRIN3B-201ENST00000234389 CUTAO60888 179 aa20.45■□□□□ 0.86
GRIN3B-201ENST00000234389 IVLP07476 585 aa20.45■□□□□ 0.86
GRIN3B-201ENST00000234389 KRT2P35908 639 aa20.45■□□□□ 0.86
GRIN3B-201ENST00000234389 LIG3P49916 1009 aa20.45■□□□□ 0.86
GRIN3B-201ENST00000234389 RABEP2Q9H5N1 569 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms