RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 KCNJ14Q9UNX9 436 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 GNA11P29992 359 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 KLHL30Q0D2K2 578 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 USP37Q86T82 979 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 DZIP3Q86Y13 1208 aaKnown RBP15.31■□□□□ 0.04
HCFC2-201ENST00000229330 GPIHBP1Q8IV16 184 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 CCDC65Q8IXS2 484 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 FAM114A2Q9NRY5 505 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 NIP7Q9Y221 180 aaKnown RBP eCLIP15.31■□□□□ 0.04
HCFC2-201ENST00000229330 ENC1O14682 589 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 CETN3O15182 167 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 ZNF365Q70YC5 407 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 MGARPQ8TDB4 240 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 SPOPO43791 374 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 SMIM24O75264 130 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 ZMYND10O75800 440 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 DNM2P50570 870 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 SCRN1Q12765 414 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 FAM207AQ9NSI2 230 aaPredicted RBP15.3■□□□□ 0.04
HCFC2-201ENST00000229330 HDAC9Q9UKV0 1011 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 ZNF853P0CG23 659 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 TNFAIP3P21580 790 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 CYP2C19P33261 490 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 RNF168Q8IYW5 571 aaPredicted RBP15.3■□□□□ 0.04
HCFC2-201ENST00000229330 CCDC197Q8NCU1 140 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 MAP4K1Q92918 833 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
HCFC2-201ENST00000229330 ANAPC4Q9UJX5 808 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 PCDHA5Q9Y5H7 936 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 HHATQ5VTY9 493 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 ZNF790Q6PG37 636 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 HS2ST1Q7LGA3 356 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 V9GY48 417 aaPredicted RBP15.3■□□□□ 0.04
HCFC2-201ENST00000229330 KDM5AP29375 1690 aaKnown RBP15.3■□□□□ 0.04
HCFC2-201ENST00000229330 GPAA1O43292 621 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 HOXB7P09629 217 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 ATP5JP18859 108 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 APBB1IPQ7Z5R6 666 aaPredicted RBP15.3■□□□□ 0.04
HCFC2-201ENST00000229330 CFAP57Q96MR6 1250 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 USP44Q9H0E7 712 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 LGR6Q9HBX8 967 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 NDUFB9Q9Y6M9 179 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 STX2P32856 288 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 PPP4R3AQ6IN85 833 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 RAB3IL1Q8TBN0 382 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 SETDB2Q96T68 719 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 MYL10Q9BUA6 226 aa15.3■□□□□ 0.04
HCFC2-201ENST00000229330 GUCY2DQ02846 1103 aa15.29■□□□□ 0.04
HCFC2-201ENST00000229330 RBL2Q08999 1139 aa15.29■□□□□ 0.04
HCFC2-201ENST00000229330 SH2D4BQ5SQS7 431 aa15.29■□□□□ 0.04
HCFC2-201ENST00000229330 ZCCHC17Q9NP64 241 aaKnown RBP15.29■□□□□ 0.04
HCFC2-201ENST00000229330 BTG4Q9NY30 223 aa15.29■□□□□ 0.04
HCFC2-201ENST00000229330 ANKRD42Q8N9B4 389 aa15.29■□□□□ 0.04
HCFC2-201ENST00000229330 SUCLG2Q96I99 432 aa15.29■□□□□ 0.04
HCFC2-201ENST00000229330 PARP2Q9UGN5 583 aa15.29■□□□□ 0.04
HCFC2-201ENST00000229330 TPX2Q9ULW0 747 aaKnown RBP15.29■□□□□ 0.04
HCFC2-201ENST00000229330 MBD4O95243 580 aa15.29■□□□□ 0.04
HCFC2-201ENST00000229330 MAP7Q14244 749 aa15.29■□□□□ 0.04
HCFC2-201ENST00000229330 MIGA1Q8NAN2 632 aa15.29■□□□□ 0.04
HCFC2-201ENST00000229330 RRP36Q96EU6 259 aaKnown RBP15.29■□□□□ 0.04
HCFC2-201ENST00000229330 CLIC6Q96NY7 704 aa15.29■□□□□ 0.04
HCFC2-201ENST00000229330 NOSTRINQ8IVI9 506 aa15.29■□□□□ 0.04
HCFC2-201ENST00000229330 SIRT2Q8IXJ6 389 aa15.29■□□□□ 0.04
HCFC2-201ENST00000229330 PLEKHF1Q96S99 279 aa15.29■□□□□ 0.04
HCFC2-201ENST00000229330 CHUKO15111 745 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 LETM2Q2VYF4 491 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 TCP11Q8WWU5 503 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 ZDHHC9Q9Y397 364 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 FLOT1O75955 427 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 PTPN21Q16825 1174 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 PHLDB3Q6NSJ2 640 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 IQSEC3Q9UPP2 1182 aaPredicted RBP15.28■□□□□ 0.04
HCFC2-201ENST00000229330 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.28■□□□□ 0.04
HCFC2-201ENST00000229330 FAM169AQ9Y6X4 670 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 PREX2Q70Z35 1606 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 H7C1D1 291 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 EYA2O00167 538 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 FERMT1Q9BQL6 677 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 ASIC3Q9UHC3 531 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 KCNK3O14649 394 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 EPB41P11171 864 aaKnown RBP15.28■□□□□ 0.04
HCFC2-201ENST00000229330 ERCC5P28715 1186 aaPredicted RBP15.28■□□□□ 0.04
HCFC2-201ENST00000229330 USP27XA6NNY8 438 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 CCDC144BQ3MJ40 725 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 NLRP3Q96P20 1036 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 POLR3EQ9NVU0 708 aa15.28■□□□□ 0.04
HCFC2-201ENST00000229330 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.28■□□□□ 0.04
HCFC2-201ENST00000229330 LARGE1O95461 756 aa15.27■□□□□ 0.04
HCFC2-201ENST00000229330 TNNI2P48788 182 aa15.27■□□□□ 0.04
HCFC2-201ENST00000229330 NNTQ13423 1086 aa15.27■□□□□ 0.04
HCFC2-201ENST00000229330 SLC39A14Q15043 492 aa15.27■□□□□ 0.04
HCFC2-201ENST00000229330 ZKSCAN8Q15776 578 aaPredicted RBP15.27■□□□□ 0.04
HCFC2-201ENST00000229330 BICD1Q96G01 975 aa15.27■□□□□ 0.04
HCFC2-201ENST00000229330 CSRNP2Q9H175 543 aa15.27■□□□□ 0.04
HCFC2-201ENST00000229330 KAT6BQ8WYB5 2073 aa15.27■□□□□ 0.04
HCFC2-201ENST00000229330 ADCY9O60503 1353 aa15.27■□□□□ 0.04
HCFC2-201ENST00000229330 SOWAHDA6NJG2 315 aa15.27■□□□□ 0.04
HCFC2-201ENST00000229330 KRIT1O00522 736 aa15.27■□□□□ 0.04
HCFC2-201ENST00000229330 FAM13AO94988 1023 aa15.27■□□□□ 0.04
HCFC2-201ENST00000229330 COPB1P53618 953 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms