RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 MYH8P13535 1937 aa21.95■■□□□ 1.1
YBX3-201ENST00000228251 NT5DC1Q5TFE4 455 aa21.95■■□□□ 1.1
YBX3-201ENST00000228251 TEX11Q8IYF3 940 aa21.95■■□□□ 1.1
YBX3-201ENST00000228251 C17orf53Q8N3J3 647 aaPredicted RBP21.95■■□□□ 1.1
YBX3-201ENST00000228251 COA1Q9GZY4 146 aa21.95■■□□□ 1.1
YBX3-201ENST00000228251 MKNK2Q9HBH9 465 aa21.95■■□□□ 1.1
YBX3-201ENST00000228251 SAP30BPQ9UHR5 308 aaKnown RBP21.95■■□□□ 1.1
YBX3-201ENST00000228251 ADAMTS3O15072 1205 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 ACTN4O43707 911 aaKnown RBP21.94■■□□□ 1.1
YBX3-201ENST00000228251 BMP15O95972 392 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 SLF2Q8IX21 1173 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 STAG2Q8N3U4 1231 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 CNNM3Q8NE01 707 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 CSRNP2Q9H175 543 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 BRMS1Q9HCU9 246 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 SH3GLB2Q9NR46 395 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 FAM13BQ9NYF5 915 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 SUGT1Q9Y2Z0 365 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 C6orf229H3BNL8 230 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 FOXN1O15353 648 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 NPR1P16066 1061 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 CDK8P49336 464 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 SARSP49591 514 aaKnown RBP21.94■■□□□ 1.1
YBX3-201ENST00000228251 USP49Q70CQ1 688 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 FBXW7Q969H0 707 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 DAGLAQ9Y4D2 1042 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 PCDHA5Q9Y5H7 936 aa21.94■■□□□ 1.1
YBX3-201ENST00000228251 PALM3A6NDB9 673 aaPredicted RBP21.93■■□□□ 1.1
YBX3-201ENST00000228251 TSPY3P0CV98 308 aa21.93■■□□□ 1.1
YBX3-201ENST00000228251 TSPY8P0CW00 308 aa21.93■■□□□ 1.1
YBX3-201ENST00000228251 BMP6P22004 513 aa21.93■■□□□ 1.1
YBX3-201ENST00000228251 TRAPPC10P48553 1259 aa21.93■■□□□ 1.1
YBX3-201ENST00000228251 ZRSR1Q15695 479 aaKnown RBP21.93■■□□□ 1.1
YBX3-201ENST00000228251 ZNF444Q8N0Y2 327 aaPredicted RBP21.93■■□□□ 1.1
YBX3-201ENST00000228251 NEDD1Q8NHV4 660 aa21.93■■□□□ 1.1
YBX3-201ENST00000228251 TMEM47Q9BQJ4 181 aa21.93■■□□□ 1.1
YBX3-201ENST00000228251 GREB1LQ9C091 1923 aaPredicted RBP21.92■■□□□ 1.1
YBX3-201ENST00000228251 M0R2N6 131 aa21.92■■□□□ 1.1
YBX3-201ENST00000228251 ATP2C1P98194 919 aaPredicted RBP21.92■■□□□ 1.1
YBX3-201ENST00000228251 LRMPQ12912 555 aa21.92■■□□□ 1.1
YBX3-201ENST00000228251 SPATA20Q8TB22 786 aa21.92■■□□□ 1.1
YBX3-201ENST00000228251 CACTINQ8WUQ7 758 aaKnown RBP21.92■■□□□ 1.1
YBX3-201ENST00000228251 FERMT2Q96AC1 680 aa21.92■■□□□ 1.1
YBX3-201ENST00000228251 PLIN4Q96Q06 1357 aa21.92■■□□□ 1.1
YBX3-201ENST00000228251 POLR2DO15514 142 aaKnown RBP21.92■■□□□ 1.1
YBX3-201ENST00000228251 CYTH3O43739 400 aa21.92■■□□□ 1.1
YBX3-201ENST00000228251 GNAQP50148 359 aa21.92■■□□□ 1.1
YBX3-201ENST00000228251 DRC7Q8IY82 874 aa21.92■■□□□ 1.1
YBX3-201ENST00000228251 CERS5Q8N5B7 392 aa21.92■■□□□ 1.1
YBX3-201ENST00000228251 ZNF287Q9HBT7 754 aa21.92■■□□□ 1.1
YBX3-201ENST00000228251 SERTAD1Q9UHV2 236 aa21.92■■□□□ 1.1
YBX3-201ENST00000228251 SMTNL1A8MU46 457 aa21.91■■□□□ 1.1
YBX3-201ENST00000228251 ATP2B1P20020 1258 aa21.91■■□□□ 1.1
YBX3-201ENST00000228251 GTF2IP78347 998 aa21.91■■□□□ 1.1
YBX3-201ENST00000228251 POSTNQ15063 836 aa21.91■■□□□ 1.1
YBX3-201ENST00000228251 TTC38Q5R3I4 469 aa21.91■■□□□ 1.1
YBX3-201ENST00000228251 A0A087X0B3 334 aa21.9■■□□□ 1.1
YBX3-201ENST00000228251 TPM2P07951 284 aa21.9■■□□□ 1.1
YBX3-201ENST00000228251 TYW1BQ6NUM6 668 aa21.9■■□□□ 1.1
YBX3-201ENST00000228251 FAM177A1Q8N128 213 aaPredicted RBP21.9■■□□□ 1.1
YBX3-201ENST00000228251 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.9■■□□□ 1.1
YBX3-201ENST00000228251 R3HCC1Q9Y3T6 440 aaKnown RBP21.9■■□□□ 1.1
YBX3-201ENST00000228251 PRR29P0C7W0 189 aa21.89■■□□□ 1.1
YBX3-201ENST00000228251 CALML3P27482 149 aa21.89■■□□□ 1.1
YBX3-201ENST00000228251 NLRP5P59047 1200 aa21.89■■□□□ 1.1
YBX3-201ENST00000228251 GABPAQ06546 454 aa21.89■■□□□ 1.1
YBX3-201ENST00000228251 OLFM4Q6UX06 510 aa21.89■■□□□ 1.1
YBX3-201ENST00000228251 SH3RF1Q7Z6J0 888 aa21.89■■□□□ 1.1
YBX3-201ENST00000228251 DAGLBQ8NCG7 672 aa21.89■■□□□ 1.1
YBX3-201ENST00000228251 FLAD1Q8NFF5 587 aa21.89■■□□□ 1.1
YBX3-201ENST00000228251 EYA3Q99504 573 aa21.89■■□□□ 1.1
YBX3-201ENST00000228251 MAN1B1Q9UKM7 699 aa21.89■■□□□ 1.1
YBX3-201ENST00000228251 C10orf71Q711Q0 1435 aa21.89■■□□□ 1.09
YBX3-201ENST00000228251 ISM2Q6H9L7 571 aa21.89■■□□□ 1.09
YBX3-201ENST00000228251 OSBPL5Q9H0X9 879 aaPredicted RBP21.89■■□□□ 1.09
YBX3-201ENST00000228251 HOOK1Q9UJC3 728 aaKnown RBP21.89■■□□□ 1.09
YBX3-201ENST00000228251 MORC3Q14149 939 aa21.88■■□□□ 1.09
YBX3-201ENST00000228251 KANK3Q6NY19 840 aa21.88■■□□□ 1.09
YBX3-201ENST00000228251 LRRC8AQ8IWT6 810 aa21.88■■□□□ 1.09
YBX3-201ENST00000228251 BLIDQ8IZY5 108 aa21.88■■□□□ 1.09
YBX3-201ENST00000228251 LZTS2Q9BRK4 669 aa21.88■■□□□ 1.09
YBX3-201ENST00000228251 SPZ1Q9BXG8 430 aa21.88■■□□□ 1.09
YBX3-201ENST00000228251 PCDHA4Q9UN74 947 aa21.88■■□□□ 1.09
YBX3-201ENST00000228251 RIMBP2O15034 1052 aa21.87■■□□□ 1.09
YBX3-201ENST00000228251 ALDH1B1P30837 517 aa21.87■■□□□ 1.09
YBX3-201ENST00000228251 PDE6BP35913 854 aa21.87■■□□□ 1.09
YBX3-201ENST00000228251 MYL5Q02045 173 aa21.87■■□□□ 1.09
YBX3-201ENST00000228251 ZNF174Q15697 407 aa21.87■■□□□ 1.09
YBX3-201ENST00000228251 ZNF772Q68DY9 489 aaPredicted RBP21.87■■□□□ 1.09
YBX3-201ENST00000228251 C4orf32Q8N8J7 132 aa21.87■■□□□ 1.09
YBX3-201ENST00000228251 TRIML1Q8N9V2 468 aa21.87■■□□□ 1.09
YBX3-201ENST00000228251 EPSTI1Q96J88 318 aa21.87■■□□□ 1.09
YBX3-201ENST00000228251 SIPA1L1O43166 1804 aa21.87■■□□□ 1.09
YBX3-201ENST00000228251 SCN9AQ15858 1988 aa21.87■■□□□ 1.09
YBX3-201ENST00000228251 NEMFO60524 1076 aa21.87■■□□□ 1.09
YBX3-201ENST00000228251 APBA3O96018 575 aa21.87■■□□□ 1.09
YBX3-201ENST00000228251 MMP10P09238 476 aa21.87■■□□□ 1.09
YBX3-201ENST00000228251 PTGDRQ13258 359 aa21.87■■□□□ 1.09
YBX3-201ENST00000228251 WWC2Q6AWC2 1192 aa21.87■■□□□ 1.09
YBX3-201ENST00000228251 PIK3AP1Q6ZUJ8 805 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms