RNA–Protein interactions for RNA: ENST00000224073.5

EDF1-201, Transcript of endothelial differentiation related factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDF1, Length 640 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-201ENST00000224073 PLEKHH3Q7Z736 793 aa15.2■□□□□ 0.02
EDF1-201ENST00000224073 CHMP4CQ96CF2 233 aa15.2■□□□□ 0.02
EDF1-201ENST00000224073 LNPKQ9C0E8 428 aa15.2■□□□□ 0.02
EDF1-201ENST00000224073 SALL3Q9BXA9 1300 aa15.19■□□□□ 0.02
EDF1-201ENST00000224073 SGPL1O95470 568 aa15.19■□□□□ 0.02
EDF1-201ENST00000224073 IGHDP01880 384 aa15.19■□□□□ 0.02
EDF1-201ENST00000224073 HMGCRP04035 888 aa15.19■□□□□ 0.02
EDF1-201ENST00000224073 PLS1Q14651 629 aa15.19■□□□□ 0.02
EDF1-201ENST00000224073 ATG4CQ96DT6 458 aa15.19■□□□□ 0.02
EDF1-201ENST00000224073 NUP88Q99567 741 aaPredicted RBP15.19■□□□□ 0.02
EDF1-201ENST00000224073 NUDT12Q9BQG2 462 aa15.19■□□□□ 0.02
EDF1-201ENST00000224073 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.19■□□□□ 0.02
EDF1-201ENST00000224073 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.19■□□□□ 0.024e-7■■■■□ 24.8
EDF1-201ENST00000224073 MKNK2Q9HBH9 465 aa15.19■□□□□ 0.02
EDF1-201ENST00000224073 ARHGEF10LQ9HCE6 1279 aa15.19■□□□□ 0.02
EDF1-201ENST00000224073 FBXO28Q9NVF7 368 aa15.19■□□□□ 0.02
EDF1-201ENST00000224073 ARPP21Q9UBL0 812 aaPredicted RBP15.19■□□□□ 0.02
EDF1-201ENST00000224073 RABGAP1Q9Y3P9 1069 aa15.19■□□□□ 0.02
EDF1-201ENST00000224073 FLOT1O75955 427 aa15.18■□□□□ 0.02
EDF1-201ENST00000224073 FARP2O94887 1054 aaPredicted RBP15.18■□□□□ 0.02
EDF1-201ENST00000224073 ZFYP08048 801 aaPredicted RBP15.18■□□□□ 0.02
EDF1-201ENST00000224073 RASA1P20936 1047 aa15.18■□□□□ 0.02
EDF1-201ENST00000224073 MAPK4P31152 587 aa15.18■□□□□ 0.02
EDF1-201ENST00000224073 HDAC1Q13547 482 aaPredicted RBP15.18■□□□□ 0.02
EDF1-201ENST00000224073 IFNL3Q8IZI9 196 aa15.18■□□□□ 0.02
EDF1-201ENST00000224073 DIS3LQ8TF46 1054 aaKnown RBP15.18■□□□□ 0.02
EDF1-201ENST00000224073 DPF3Q92784 378 aa15.18■□□□□ 0.02
EDF1-201ENST00000224073 INCENPQ9NQS7 918 aa15.18■□□□□ 0.02
EDF1-201ENST00000224073 PCDH10Q9P2E7 1040 aa15.18■□□□□ 0.02
EDF1-201ENST00000224073 TMX2Q9Y320 296 aa15.18■□□□□ 0.02
EDF1-201ENST00000224073 SUPT16HQ9Y5B9 1047 aaKnown RBP15.18■□□□□ 0.02
EDF1-201ENST00000224073 H0YGN5 161 aa15.17■□□□□ 0.02
EDF1-201ENST00000224073 PRKAR2AP13861 404 aaKnown RBP15.17■□□□□ 0.02
EDF1-201ENST00000224073 PDE1AP54750 535 aa15.17■□□□□ 0.02
EDF1-201ENST00000224073 COG2Q14746 738 aa15.17■□□□□ 0.02
EDF1-201ENST00000224073 ZMYM1Q5SVZ6 1142 aa15.17■□□□□ 0.02
EDF1-201ENST00000224073 MORN1Q5T089 497 aa15.17■□□□□ 0.02
EDF1-201ENST00000224073 NKX2-3Q8TAU0 364 aa15.17■□□□□ 0.02
EDF1-201ENST00000224073 USP6NLQ92738 828 aa15.17■□□□□ 0.02
EDF1-201ENST00000224073 CCDC17Q96LX7 622 aa15.17■□□□□ 0.02
EDF1-201ENST00000224073 VCPKMTQ9H867 229 aa15.17■□□□□ 0.02
EDF1-201ENST00000224073 PAK6Q9NQU5 681 aaPredicted RBP15.17■□□□□ 0.02
EDF1-201ENST00000224073 FLRT1Q9NZU1 646 aa15.17■□□□□ 0.02
EDF1-201ENST00000224073 PATL2C9JE40 543 aaKnown RBP15.16■□□□□ 0.02
EDF1-201ENST00000224073 ZKSCAN1P17029 563 aaPredicted RBP15.16■□□□□ 0.02
EDF1-201ENST00000224073 CCND3P30281 292 aaPredicted RBP15.16■□□□□ 0.02
EDF1-201ENST00000224073 CACNB2Q08289 660 aaPredicted RBP15.16■□□□□ 0.02
EDF1-201ENST00000224073 SBK1Q52WX2 424 aa15.16■□□□□ 0.02
EDF1-201ENST00000224073 FAM47AQ5JRC9 791 aa15.16■□□□□ 0.02
EDF1-201ENST00000224073 FAM83BQ5T0W9 1011 aa15.16■□□□□ 0.02
EDF1-201ENST00000224073 VPS53Q5VIR6 699 aa15.16■□□□□ 0.02
EDF1-201ENST00000224073 GTF3C2Q8WUA4 911 aaPredicted RBP15.16■□□□□ 0.02
EDF1-201ENST00000224073 GCC1Q96CN9 775 aa15.16■□□□□ 0.02
EDF1-201ENST00000224073 MOV10L1Q9BXT6 1211 aaKnown RBP15.16■□□□□ 0.02
EDF1-201ENST00000224073 KANSL2Q9H9L4 492 aa15.16■□□□□ 0.02
EDF1-201ENST00000224073 FOXP2O15409 715 aa15.15■□□□□ 0.02
EDF1-201ENST00000224073 DSG3P32926 999 aa15.15■□□□□ 0.02
EDF1-201ENST00000224073 RGS2P41220 211 aa15.15■□□□□ 0.02
EDF1-201ENST00000224073 CCNA1P78396 465 aa15.15■□□□□ 0.02
EDF1-201ENST00000224073 CTDSPL2Q05D32 466 aa15.15■□□□□ 0.02
EDF1-201ENST00000224073 MAP2K5Q13163 448 aa15.15■□□□□ 0.02
EDF1-201ENST00000224073 LBX2Q6XYB7 198 aa15.15■□□□□ 0.02
EDF1-201ENST00000224073 UBE2Q1Q7Z7E8 422 aa15.15■□□□□ 0.02
EDF1-201ENST00000224073 NPLOC4Q8TAT6 608 aa15.15■□□□□ 0.02
EDF1-201ENST00000224073 SOCS4Q8WXH5 440 aa15.15■□□□□ 0.02
EDF1-201ENST00000224073 PAWRQ96IZ0 340 aaKnown RBP15.15■□□□□ 0.02
EDF1-201ENST00000224073 FAM227BQ96M60 508 aa15.15■□□□□ 0.02
EDF1-201ENST00000224073 HMX1Q9NP08 348 aaPredicted RBP15.15■□□□□ 0.02
EDF1-201ENST00000224073 HOXC10Q9NYD6 342 aa15.15■□□□□ 0.02
EDF1-201ENST00000224073 CLIP2Q9UDT6 1046 aa15.15■□□□□ 0.02
EDF1-201ENST00000224073 RLFQ13129 1914 aa15.15■□□□□ 0.02
EDF1-201ENST00000224073 GNAT2P19087 354 aa15.14■□□□□ 0.01
EDF1-201ENST00000224073 ERCC3P19447 782 aa15.14■□□□□ 0.01
EDF1-201ENST00000224073 PTPREP23469 700 aa15.14■□□□□ 0.01
EDF1-201ENST00000224073 SLC4A3P48751 1232 aa15.14■□□□□ 0.01
EDF1-201ENST00000224073 LRRFIP1Q32MZ4 808 aaKnown RBP15.14■□□□□ 0.01
EDF1-201ENST00000224073 GIMAP6Q6P9H5 292 aa15.14■□□□□ 0.01
EDF1-201ENST00000224073 NCAPG2Q86XI2 1143 aa15.14■□□□□ 0.01
EDF1-201ENST00000224073 LRRC47Q8N1G4 583 aaKnown RBP15.14■□□□□ 0.01
EDF1-201ENST00000224073 APBA2Q99767 749 aa15.14■□□□□ 0.01
EDF1-201ENST00000224073 SPATC1LQ9H0A9 340 aa15.14■□□□□ 0.01
EDF1-201ENST00000224073 NAPBQ9H115 298 aa15.14■□□□□ 0.01
EDF1-201ENST00000224073 RWDD1Q9H446 243 aaPredicted RBP15.14■□□□□ 0.01
EDF1-201ENST00000224073 SH2D4AQ9H788 454 aa15.14■□□□□ 0.01
EDF1-201ENST00000224073 STAP2Q9UGK3 403 aa15.14■□□□□ 0.01
EDF1-201ENST00000224073 TACC3Q9Y6A5 838 aa15.14■□□□□ 0.01
EDF1-201ENST00000224073 RPTORQ8N122 1335 aa15.14■□□□□ 0.01
EDF1-201ENST00000224073 ROBO3Q96MS0 1386 aa15.13■□□□□ 0.01
EDF1-201ENST00000224073 A0A0D9SFI3 127 aa15.13■□□□□ 0.01
EDF1-201ENST00000224073 SLC15A5A6NIM6 579 aa15.13■□□□□ 0.01
EDF1-201ENST00000224073 TRIM6-TRIM34B2RNG4 842 aa15.13■□□□□ 0.01
EDF1-201ENST00000224073 WDR46O15213 610 aaKnown RBP15.13■□□□□ 0.01
EDF1-201ENST00000224073 CYP2C19P33261 490 aa15.13■□□□□ 0.01
EDF1-201ENST00000224073 PPARAQ07869 468 aa15.13■□□□□ 0.01
EDF1-201ENST00000224073 TMEM132BQ14DG7 1078 aa15.13■□□□□ 0.01
EDF1-201ENST00000224073 ZNF444Q8N0Y2 327 aaPredicted RBP15.13■□□□□ 0.01
EDF1-201ENST00000224073 LPAR1Q92633 364 aa15.13■□□□□ 0.01
EDF1-201ENST00000224073 RILPL2Q969X0 211 aa15.13■□□□□ 0.01
EDF1-201ENST00000224073 CEP95Q96GE4 821 aa15.13■□□□□ 0.01
EDF1-201ENST00000224073 NACAP1Q9BZK3 213 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms