RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 HPSEQ9Y251 543 aa12.58□□□□□ -0.4
ACTN1-201ENST00000193403 MYO1BO43795 1136 aa12.58□□□□□ -0.4
ACTN1-201ENST00000193403 UBA7P41226 1012 aa12.58□□□□□ -0.4
ACTN1-201ENST00000193403 COPB1P53618 953 aaKnown RBP12.58□□□□□ -0.4
ACTN1-201ENST00000193403 GDAQ9Y2T3 454 aa12.58□□□□□ -0.4
ACTN1-201ENST00000193403 TRIM49BA6NDI0 452 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 ADD2P35612 726 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 SLC7A5Q01650 507 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 SPAG1Q07617 926 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 KIF5AQ12840 1032 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 MUM1L1Q5H9M0 696 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 TTC38Q5R3I4 469 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 PANX2Q96RD6 677 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 NAA15Q9BXJ9 866 aaKnown RBP12.57□□□□□ -0.4
ACTN1-201ENST00000193403 BAZ2BQ9UIF8 2168 aaKnown RBP12.57□□□□□ -0.4
ACTN1-201ENST00000193403 LRRIQ3A6PVS8 624 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-201ENST00000193403 IRS4O14654 1257 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-201ENST00000193403 USP5P45974 858 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 GNGT1P63211 74 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 PTGDRQ13258 359 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 TRMT1LQ7Z2T5 733 aaKnown RBP12.57□□□□□ -0.4
ACTN1-201ENST00000193403 IQCA1Q86XH1 822 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 TMEM139Q8IV31 216 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 PAGE5Q96GU1 130 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 G3V3G9 751 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 CD44P16070 742 aaKnown RBP12.57□□□□□ -0.4
ACTN1-201ENST00000193403 RDXP35241 583 aaKnown RBP12.57□□□□□ -0.4
ACTN1-201ENST00000193403 CYLC1P35663 651 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-201ENST00000193403 ARID5AQ03989 594 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 CKAP4Q07065 602 aaKnown RBP12.57□□□□□ -0.4
ACTN1-201ENST00000193403 HLTFQ14527 1009 aaKnown RBP eCLIP12.57□□□□□ -0.4
ACTN1-201ENST00000193403 PTPROQ16827 1216 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 DCAF8Q5TAQ9 597 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 DNAJC10Q8IXB1 793 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 FANCBQ8NB91 859 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 CCDC42Q96M95 316 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 MMRN2Q9H8L6 949 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 CNNM2Q9H8M5 875 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 LY9Q9HBG7 655 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 SEC31BQ9NQW1 1179 aa12.57□□□□□ -0.4
ACTN1-201ENST00000193403 FBXO2Q9UK22 296 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-201ENST00000193403 XRN1Q8IZH2 1706 aaKnown RBP12.56□□□□□ -0.4
ACTN1-201ENST00000193403 NDUFAB1O14561 156 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 ERLIN2O94905 339 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 SLC5A1P13866 664 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 MCM3P25205 808 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 NR1I3Q14994 352 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 IQCEQ6IPM2 695 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 PAXIP1Q6ZW49 1069 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-201ENST00000193403 MAATS1Q7Z4T9 603 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 NKX2-3Q8TAU0 364 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 MKRN1Q9UHC7 482 aaKnown RBP12.56□□□□□ -0.4
ACTN1-201ENST00000193403 CYP2D7A0A087X1C5 515 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 ZNF185O15231 689 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 FMNL1O95466 1100 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-201ENST00000193403 GYPCP04921 128 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 ERCC5P28715 1186 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-201ENST00000193403 GGCXP38435 758 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 TBC1D8BQ0IIM8 1120 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 ODF2Q5BJF6 829 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 MAP3K14Q99558 947 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 KCND1Q9NSA2 647 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 TULP2O00295 520 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 ATP1A1P05023 1023 aaKnown RBP12.56□□□□□ -0.4
ACTN1-201ENST00000193403 PAFAH1B1P43034 410 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 ESR2Q92731 530 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 RNF41Q9H4P4 317 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-201ENST00000193403 ABHD10Q9NUJ1 306 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 FAM53CQ9NYF3 392 aa12.56□□□□□ -0.4
ACTN1-201ENST00000193403 PPARAQ07869 468 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 ICE2Q659A1 982 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 TRIML1Q8N9V2 468 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 OR8K1Q8NGG5 319 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 RASGRP4Q8TDF6 673 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 MMS19Q96T76 1030 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 GPR108Q9NPR9 543 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 SRCAPQ6ZRS2 3230 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 MON2Q7Z3U7 1717 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 FAM208AQ9UK61 1670 aaKnown RBP12.55□□□□□ -0.4
ACTN1-201ENST00000193403 A0A1B0GTH6 734 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 CCDC194A0A1B0GVG4 234 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 NDUFA10O95299 355 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 HPDP32754 393 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-201ENST00000193403 IGHMBP2P38935 993 aaKnown RBP12.55□□□□□ -0.4
ACTN1-201ENST00000193403 TOB1P50616 345 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-201ENST00000193403 CACNA2D4Q7Z3S7 1137 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 ANKRD18AQ8IVF6 992 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 L1RE1Q9UN81 338 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 NCAPD2Q15021 1401 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 TNKSO95271 1327 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 USO1O60763 962 aaKnown RBP12.55□□□□□ -0.4
ACTN1-201ENST00000193403 HSF2BPO75031 334 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 IFNAR1P17181 557 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 CUL4BQ13620 913 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 MED4Q9NPJ6 270 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 SRPRBQ9Y5M8 271 aaKnown RBP12.55□□□□□ -0.4
ACTN1-201ENST00000193403 RFX7Q2KHR2 1363 aa12.55□□□□□ -0.4
ACTN1-201ENST00000193403 B4DLN1 442 aa12.54□□□□□ -0.4
ACTN1-201ENST00000193403 PSMA7O14818 248 aa12.54□□□□□ -0.4
ACTN1-201ENST00000193403 INPP5BP32019 993 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms