RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TIGD1Q96MW7 591 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 SERPINB13Q9UIV8 391 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 HPSEQ9Y251 543 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 KIF13BQ9NQT8 1826 aa16.47■□□□□ 0.23
RTFDC1-201ENST00000023939 PICALMQ13492 652 aa16.47■□□□□ 0.23
RTFDC1-201ENST00000023939 HS1BP3Q53T59 392 aa16.47■□□□□ 0.23
RTFDC1-201ENST00000023939 SASS6Q6UVJ0 657 aa16.47■□□□□ 0.23
RTFDC1-201ENST00000023939 DHX36Q9H2U1 1008 aaKnown RBP16.47■□□□□ 0.23
RTFDC1-201ENST00000023939 STX8Q9UNK0 236 aa16.47■□□□□ 0.23
RTFDC1-201ENST00000023939 CEP131Q9UPN4 1083 aa16.47■□□□□ 0.23
RTFDC1-201ENST00000023939 A0A1B0GVL5 298 aa16.46■□□□□ 0.23
RTFDC1-201ENST00000023939 BMP15O95972 392 aa16.46■□□□□ 0.23
RTFDC1-201ENST00000023939 HLA-DOAP06340 250 aa16.46■□□□□ 0.23
RTFDC1-201ENST00000023939 CALML3P27482 149 aa16.46■□□□□ 0.23
RTFDC1-201ENST00000023939 RESP18Q5W5W9 173 aa16.46■□□□□ 0.23
RTFDC1-201ENST00000023939 KIAA0825Q8IV33 1275 aa16.46■□□□□ 0.23
RTFDC1-201ENST00000023939 ZNF579Q8NAF0 562 aaKnown RBP16.46■□□□□ 0.23
RTFDC1-201ENST00000023939 CEP95Q96GE4 821 aa16.46■□□□□ 0.23
RTFDC1-201ENST00000023939 SPZ1Q9BXG8 430 aa16.46■□□□□ 0.23
RTFDC1-201ENST00000023939 ZNF219Q9P2Y4 722 aaPredicted RBP16.46■□□□□ 0.23
RTFDC1-201ENST00000023939 ADAMTSL1Q8N6G6 1762 aa16.46■□□□□ 0.23
RTFDC1-201ENST00000023939 PPIP5K2O43314 1243 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 C21orf2O43822 256 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 PFKFB1P16118 471 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 KCNA3P22001 575 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 PTPREP23469 700 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 MARCKSP29966 332 aaPredicted RBP16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 PPP4R3BQ5MIZ7 849 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 SHC4Q6S5L8 630 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 STAG2Q8N3U4 1231 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 KRI1Q8N9T8 703 aaKnown RBP16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 MTMR4Q9NYA4 1195 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 PSME4Q14997 1843 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 hCG_1642624A0A1W2PR95 340 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 SHMT1P34896 483 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 TRAPPC10P48553 1259 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 SLC35G1Q2M3R5 365 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 GALNT17Q6IS24 598 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 CCDC17Q96LX7 622 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 CABP5Q9NP86 173 aa16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 NOL7Q9UMY1 257 aaKnown RBP16.45■□□□□ 0.22
RTFDC1-201ENST00000023939 COL2A1P02458 1487 aaPredicted RBP16.44■□□□□ 0.22
RTFDC1-201ENST00000023939 TRIM75PA6NK02 468 aa16.44■□□□□ 0.22
RTFDC1-201ENST00000023939 YDJCA8MPS7 323 aa16.44■□□□□ 0.22
RTFDC1-201ENST00000023939 ZNF202O95125 648 aa16.44■□□□□ 0.22
RTFDC1-201ENST00000023939 NFIAQ12857 509 aa16.44■□□□□ 0.22
RTFDC1-201ENST00000023939 SOGA3Q5TF21 947 aa16.44■□□□□ 0.22
RTFDC1-201ENST00000023939 ELOA2Q8IYF1 753 aaPredicted RBP16.44■□□□□ 0.22
RTFDC1-201ENST00000023939 DAGLBQ8NCG7 672 aa16.44■□□□□ 0.22
RTFDC1-201ENST00000023939 TRIM44Q96DX7 344 aaPredicted RBP16.44■□□□□ 0.22
RTFDC1-201ENST00000023939 FBXO2Q9UK22 296 aaPredicted RBP16.44■□□□□ 0.22
RTFDC1-201ENST00000023939 CYTH3O43739 400 aa16.43■□□□□ 0.22
RTFDC1-201ENST00000023939 PARP1P09874 1014 aaKnown RBP16.43■□□□□ 0.22
RTFDC1-201ENST00000023939 DPEP1P16444 411 aa16.43■□□□□ 0.22
RTFDC1-201ENST00000023939 NLRP5P59047 1200 aa16.43■□□□□ 0.22
RTFDC1-201ENST00000023939 FAM43AQ8N2R8 423 aa16.43■□□□□ 0.22
RTFDC1-201ENST00000023939 PCDHB6Q9Y5E3 794 aa16.43■□□□□ 0.22
RTFDC1-201ENST00000023939 SRPRBQ9Y5M8 271 aaKnown RBP16.43■□□□□ 0.22
RTFDC1-201ENST00000023939 GREB1LQ9C091 1923 aaPredicted RBP16.43■□□□□ 0.22
RTFDC1-201ENST00000023939 KLRF2D3W0D1 207 aa16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 SNHG28P0DPA3 235 aa16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 AKR1B1P15121 316 aa16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 TGFB2P61812 414 aa16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 STX1AQ16623 288 aa16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 ANO6Q4KMQ2 910 aa16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 METTL16Q86W50 562 aaKnown RBP16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 CCDC148Q8NFR7 591 aa16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 SDF4Q9BRK5 362 aa16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 FAM198AQ9UFP1 575 aa16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 ENTPD3O75355 529 aa16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 SYKP43405 635 aa16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 EARS2Q5JPH6 523 aaKnown RBP16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 ANO10Q9NW15 660 aa16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 BARHL2Q9NY43 387 aa16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 PI4KBQ9UBF8 816 aa16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 PCDHA4Q9UN74 947 aa16.42■□□□□ 0.22
RTFDC1-201ENST00000023939 ATRNL1Q5VV63 1379 aa16.41■□□□□ 0.22
RTFDC1-201ENST00000023939 TTLL1O95922 423 aa16.41■□□□□ 0.22
RTFDC1-201ENST00000023939 VIL1P09327 827 aaKnown RBP16.41■□□□□ 0.22
RTFDC1-201ENST00000023939 VEGFAP15692 232 aaPredicted RBP16.41■□□□□ 0.22
RTFDC1-201ENST00000023939 ASPRV1Q53RT3 343 aa16.41■□□□□ 0.22
RTFDC1-201ENST00000023939 FOXP4Q8IVH2 680 aaPredicted RBP16.41■□□□□ 0.22
RTFDC1-201ENST00000023939 BLIDQ8IZY5 108 aa16.41■□□□□ 0.22
RTFDC1-201ENST00000023939 GMLQ99445 158 aa16.41■□□□□ 0.22
RTFDC1-201ENST00000023939 CBX8Q9HC52 389 aa16.41■□□□□ 0.22
RTFDC1-201ENST00000023939 KIAA1468Q9P260 1216 aa16.41■□□□□ 0.22
RTFDC1-201ENST00000023939 M0R2N6 131 aa16.4■□□□□ 0.22
RTFDC1-201ENST00000023939 PDHBP11177 359 aa16.4■□□□□ 0.22
RTFDC1-201ENST00000023939 RSBN1LQ6PCB5 846 aaPredicted RBP16.4■□□□□ 0.22
RTFDC1-201ENST00000023939 ZFPM1Q8IX07 1006 aa16.4■□□□□ 0.22
RTFDC1-201ENST00000023939 FERMT2Q96AC1 680 aa16.4■□□□□ 0.22
RTFDC1-201ENST00000023939 CLIC6Q96NY7 704 aa16.4■□□□□ 0.22
RTFDC1-201ENST00000023939 RIOX1Q9H6W3 641 aa16.4■□□□□ 0.22
RTFDC1-201ENST00000023939 KCNH3Q9ULD8 1083 aa16.4■□□□□ 0.22
RTFDC1-201ENST00000023939 MYH8P13535 1937 aa16.4■□□□□ 0.22
RTFDC1-201ENST00000023939 SIPA1L1O43166 1804 aa16.4■□□□□ 0.22
RTFDC1-201ENST00000023939 FAM205CA6NFA0 338 aa16.39■□□□□ 0.21
RTFDC1-201ENST00000023939 hCG_1984214I3L0E3 225 aa16.39■□□□□ 0.21
RTFDC1-201ENST00000023939 STXBP3O00186 592 aa16.39■□□□□ 0.21
RTFDC1-201ENST00000023939 ZNF165P49910 485 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms