RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 LHX8Q68G74 356 aa19.15■□□□□ 0.66
ERCC1-201ENST00000013807 DIS3LQ8TF46 1054 aaKnown RBP19.15■□□□□ 0.66
ERCC1-201ENST00000013807 LPAR1Q92633 364 aa19.15■□□□□ 0.66
ERCC1-201ENST00000013807 DCTPP1Q9H773 170 aa19.15■□□□□ 0.66
ERCC1-201ENST00000013807 COL11A1P12107 1806 aaPredicted RBP19.14■□□□□ 0.65
ERCC1-201ENST00000013807 PRKAB2O43741 272 aa19.14■□□□□ 0.65
ERCC1-201ENST00000013807 CYP2D6P10635 497 aa19.14■□□□□ 0.65
ERCC1-201ENST00000013807 GRB14Q14449 540 aa19.14■□□□□ 0.65
ERCC1-201ENST00000013807 CCL14Q16627 93 aa19.14■□□□□ 0.65
ERCC1-201ENST00000013807 SLFNL1Q499Z3 407 aa19.14■□□□□ 0.65
ERCC1-201ENST00000013807 ZSCAN25Q6NSZ9 544 aa19.14■□□□□ 0.65
ERCC1-201ENST00000013807 TMX2Q9Y320 296 aa19.14■□□□□ 0.65
ERCC1-201ENST00000013807 DNAH12Q6ZR08 3092 aa19.14■□□□□ 0.65
ERCC1-201ENST00000013807 LAMA3Q16787 3333 aa19.13■□□□□ 0.65
ERCC1-201ENST00000013807 STRNO43815 780 aa19.13■□□□□ 0.65
ERCC1-201ENST00000013807 C16orf86Q6ZW13 317 aa19.13■□□□□ 0.65
ERCC1-201ENST00000013807 SLC44A5Q8NCS7 719 aa19.13■□□□□ 0.65
ERCC1-201ENST00000013807 USP17L12C9JPN9 530 aa19.12■□□□□ 0.65
ERCC1-201ENST00000013807 USP17L21D6R901 530 aa19.12■□□□□ 0.65
ERCC1-201ENST00000013807 MPHOSPH10O00566 681 aaKnown RBP19.12■□□□□ 0.65
ERCC1-201ENST00000013807 COL6A1P12109 1028 aa19.12■□□□□ 0.65
ERCC1-201ENST00000013807 CDK8P49336 464 aa19.12■□□□□ 0.65
ERCC1-201ENST00000013807 MB21D1Q8N884 522 aa19.12■□□□□ 0.65
ERCC1-201ENST00000013807 SHCBP1Q8NEM2 672 aa19.12■□□□□ 0.65
ERCC1-201ENST00000013807 DYNLL2Q96FJ2 89 aa19.12■□□□□ 0.65
ERCC1-201ENST00000013807 PUS7LQ9H0K6 701 aaKnown RBP19.12■□□□□ 0.65
ERCC1-201ENST00000013807 C11orf49Q9H6J7 331 aa19.12■□□□□ 0.65
ERCC1-201ENST00000013807 ECHDC1Q9NTX5 307 aa19.12■□□□□ 0.65
ERCC1-201ENST00000013807 CHGBP05060 677 aa19.11■□□□□ 0.65
ERCC1-201ENST00000013807 AKR1B1P15121 316 aa19.11■□□□□ 0.65
ERCC1-201ENST00000013807 BMP8BP34820 402 aa19.11■□□□□ 0.65
ERCC1-201ENST00000013807 KIAA1755Q5JYT7 1200 aa19.11■□□□□ 0.65
ERCC1-201ENST00000013807 SH2D4AQ9H788 454 aa19.11■□□□□ 0.65
ERCC1-201ENST00000013807 VCPKMTQ9H867 229 aa19.11■□□□□ 0.65
ERCC1-201ENST00000013807 ARHGEF10LQ9HCE6 1279 aa19.11■□□□□ 0.65
ERCC1-201ENST00000013807 ADAMTS5Q9UNA0 930 aa19.11■□□□□ 0.65
ERCC1-201ENST00000013807 SMCHD1A6NHR9 2005 aa19.1■□□□□ 0.65
ERCC1-201ENST00000013807 CCND3P30281 292 aaPredicted RBP19.1■□□□□ 0.65
ERCC1-201ENST00000013807 DSG3P32926 999 aa19.1■□□□□ 0.65
ERCC1-201ENST00000013807 SBK1Q52WX2 424 aa19.1■□□□□ 0.65
ERCC1-201ENST00000013807 GIMAP6Q6P9H5 292 aa19.1■□□□□ 0.65
ERCC1-201ENST00000013807 CTR9Q6PD62 1173 aa19.1■□□□□ 0.65
ERCC1-201ENST00000013807 AMOTL1Q8IY63 956 aa19.1■□□□□ 0.65
ERCC1-201ENST00000013807 DDRGK1Q96HY6 314 aa19.1■□□□□ 0.65
ERCC1-201ENST00000013807 STRBPQ96SI9 672 aaKnown RBP19.1■□□□□ 0.65
ERCC1-201ENST00000013807 MOV10L1Q9BXT6 1211 aaKnown RBP19.1■□□□□ 0.65
ERCC1-201ENST00000013807 SPATC1LQ9H0A9 340 aa19.1■□□□□ 0.65
ERCC1-201ENST00000013807 FLRT1Q9NZU1 646 aa19.1■□□□□ 0.65
ERCC1-201ENST00000013807 IVNS1ABPQ9Y6Y0 642 aa19.1■□□□□ 0.65
ERCC1-201ENST00000013807 PFASO15067 1338 aa19.09■□□□□ 0.65
ERCC1-201ENST00000013807 SMIM22K7EJ46 135 aa19.09■□□□□ 0.65
ERCC1-201ENST00000013807 SMARCA5O60264 1052 aaPredicted RBP19.09■□□□□ 0.65
ERCC1-201ENST00000013807 ICA1Q05084 483 aa19.09■□□□□ 0.65
ERCC1-201ENST00000013807 MFSD14CQ5VZR4 134 aa19.09■□□□□ 0.65
ERCC1-201ENST00000013807 ABRAQ8N0Z2 381 aa19.09■□□□□ 0.65
ERCC1-201ENST00000013807 KBTBD3Q8NAB2 608 aa19.09■□□□□ 0.65
ERCC1-201ENST00000013807 GDF15Q99988 308 aa19.09■□□□□ 0.65
ERCC1-201ENST00000013807 KANSL2Q9H9L4 492 aa19.09■□□□□ 0.65
ERCC1-201ENST00000013807 SLC4A4Q9Y6R1 1079 aa19.09■□□□□ 0.65
ERCC1-201ENST00000013807 PLXNA1Q9UIW2 1896 aa19.09■□□□□ 0.65
ERCC1-201ENST00000013807 MYH4Q9Y623 1939 aa19.08■□□□□ 0.65
ERCC1-201ENST00000013807 WDR46O15213 610 aaKnown RBP19.08■□□□□ 0.64
ERCC1-201ENST00000013807 MSCO60682 206 aa19.08■□□□□ 0.64
ERCC1-201ENST00000013807 NPLOC4Q8TAT6 608 aa19.08■□□□□ 0.64
ERCC1-201ENST00000013807 MROH8Q9H579 483 aa19.08■□□□□ 0.64
ERCC1-201ENST00000013807 CWC22Q9HCG8 908 aaKnown RBP19.08■□□□□ 0.64
ERCC1-201ENST00000013807 ARPP21Q9UBL0 812 aaPredicted RBP19.08■□□□□ 0.64
ERCC1-201ENST00000013807 CYP2D7A0A087X1C5 515 aa19.07■□□□□ 0.64
ERCC1-201ENST00000013807 OLFML2BQ68BL8 750 aa19.07■□□□□ 0.64
ERCC1-201ENST00000013807 TANGO6Q9C0B7 1094 aa19.07■□□□□ 0.64
ERCC1-201ENST00000013807 BCL11AQ9H165 835 aa19.07■□□□□ 0.64
ERCC1-201ENST00000013807 GSG1L2A8MUP6 293 aa19.06■□□□□ 0.64
ERCC1-201ENST00000013807 ZFYP08048 801 aaPredicted RBP19.06■□□□□ 0.64
ERCC1-201ENST00000013807 EEF2P13639 858 aaKnown RBP19.06■□□□□ 0.64
ERCC1-201ENST00000013807 ERCC3P19447 782 aa19.06■□□□□ 0.64
ERCC1-201ENST00000013807 ATP2B2Q01814 1243 aa19.06■□□□□ 0.64
ERCC1-201ENST00000013807 WDR78Q5VTH9 848 aa19.06■□□□□ 0.64
ERCC1-201ENST00000013807 APPBP2Q92624 585 aa19.06■□□□□ 0.64
ERCC1-201ENST00000013807 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.06■□□□□ 0.64
ERCC1-201ENST00000013807 STAP2Q9UGK3 403 aa19.06■□□□□ 0.64
ERCC1-201ENST00000013807 ROBO3Q96MS0 1386 aa19.06■□□□□ 0.64
ERCC1-201ENST00000013807 FLOT1O75955 427 aa19.05■□□□□ 0.64
ERCC1-201ENST00000013807 CYBAP13498 195 aa19.05■□□□□ 0.64
ERCC1-201ENST00000013807 ADORA2AP29274 412 aa19.05■□□□□ 0.64
ERCC1-201ENST00000013807 CLEC10AQ8IUN9 316 aa19.05■□□□□ 0.64
ERCC1-201ENST00000013807 OSBP2Q969R2 916 aa19.05■□□□□ 0.64
ERCC1-201ENST00000013807 GPATCH3Q96I76 525 aa19.05■□□□□ 0.64
ERCC1-201ENST00000013807 DDX20Q9UHI6 824 aaKnown RBP19.05■□□□□ 0.64
ERCC1-201ENST00000013807 RNF113AO15541 343 aaKnown RBP19.04■□□□□ 0.64
ERCC1-201ENST00000013807 SLC25A27O95847 323 aa19.04■□□□□ 0.64
ERCC1-201ENST00000013807 DPP9Q86TI2 863 aa19.04■□□□□ 0.64
ERCC1-201ENST00000013807 C7orf61Q8IZ16 206 aa19.04■□□□□ 0.64
ERCC1-201ENST00000013807 SPICE1Q8N0Z3 855 aa19.04■□□□□ 0.64
ERCC1-201ENST00000013807 ATG4CQ96DT6 458 aa19.04■□□□□ 0.64
ERCC1-201ENST00000013807 SLC5A4Q9NY91 659 aa19.04■□□□□ 0.64
ERCC1-201ENST00000013807 TTC41PQ6P2S7 1318 aa19.03■□□□□ 0.64
ERCC1-201ENST00000013807 COBLO75128 1261 aa19.03■□□□□ 0.64
ERCC1-201ENST00000013807 GNAT2P19087 354 aa19.03■□□□□ 0.64
ERCC1-201ENST00000013807 CYP2C19P33261 490 aa19.03■□□□□ 0.64
ERCC1-201ENST00000013807 TMEM132BQ14DG7 1078 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms