RNA–Protein interactions for RNA: ENSMUST00000193170.1

Ccdc71-202, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-202ENSMUST00000193170 Hoxc9P09633 260 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Hsd3b2P26149 373 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Cdk4P30285 303 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Atp8a1P70704 1164 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Gm428Q3UTE2 360 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Smg7Q5RJH6 1138 aaKnown RBP10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 LpoQ5SW46 710 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Ube2oQ6ZPJ3 1288 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 MlecQ6ZQI3 291 aaKnown RBP10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 TiprlQ8BH58 271 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Sun2Q8BJS4 731 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Hgh1Q8C3I8 393 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Bicd2Q921C5 820 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Tbc1d7Q9D0K0 293 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Astn2Q80Z10 1352 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Sh2d4bA6X942 431 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 1700113H08RikE9Q9Q5 327 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Gm5861F6VCN9 180 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Adam19O35674 920 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Frat1P70339 274 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Uhmk1P97343 419 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Kcnb1Q03717 857 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Tnni3kQ5GIG6 834 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Map3k2Q61083 619 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Plekha6Q7TQG1 1173 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Ercc6lQ8BHK9 1240 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Ift74Q8BKE9 600 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Adamts2Q8C9W3 1213 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Nacc2Q9DCM7 586 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Adcy9P51830 1353 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Heatr4E9Q357 955 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Myo1bP46735 1107 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Cdkn1cP49919 348 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Eif4a1P60843 406 aaKnown RBP10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Ubn1Q4G0F8 1135 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 2900092C05RikQ5I0V9 184 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Tnfaip3Q60769 775 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Elf1Q60775 612 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Prpf4bQ61136 1007 aaKnown RBP10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 SgtaQ8BJU0 315 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Fam163bQ8BUM6 167 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Mettl5Q8K1A0 209 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Mst1rQ62190 1378 aa10.28□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Dip2bQ3UH60 1574 aa10.27□□□□□ -0.76
Ccdc71-202ENSMUST00000193170 Ddx23D3Z0M9 819 aaKnown RBP10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Zscan29E9Q5B4 869 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Ubxn10Q8BG34 277 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Zfp317Q8C0Q5 607 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Slc26a8Q8R0C3 999 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Nop14Q8R3N1 860 aaKnown RBP10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Bloc1s2Q9CWG9 143 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Sil1Q9EPK6 465 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Map2P20357 1828 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Speer4dL7N216 212 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Myd88P22366 296 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Hoxc10P31257 342 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Senp1P59110 640 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Odr4Q4PJX1 447 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Syce2Q505B8 171 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Usp28Q5I043 1051 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Etaa1Q5SVT3 877 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Iws1Q8C1D8 766 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Plcd1Q8R3B1 756 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Wdr45bQ9CR39 344 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 4930548H24RikQ9D496 437 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Znf287Q9EQB9 759 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Sh3bgrQ9WUZ7 214 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Frmpd2A0A140LI67 1392 aa10.27□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Magea10A2AMW4 325 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Crtc2Q3U182 692 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Spg7Q3ULF4 781 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Atp1a3Q6PIC6 1013 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Zfp397Q7TNK4 527 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Anapc4Q91W96 807 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Fam84aQ9D650 292 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Pus3Q9JI38 481 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Tnrc6bQ8BKI2 1810 aaKnown RBP10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Ahnak2E9PYB0 1738 aaKnown RBP10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Gm45140A0A0N4SUM8 220 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 RdxP26043 583 aaKnown RBP10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Hsd3b3P26150 373 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Ag2Q3UPL5 249 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Specc1Q5SXY1 1067 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Krt12Q64291 487 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Tmco3Q8BH01 678 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Ano1Q8BHY3 960 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 ZwintQ9CQU5 252 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Lrrc17Q9CXD9 443 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Ift43Q9DA69 206 aa10.26□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Zbtb10E9Q8X5 861 aa10.25□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Dync1i1O88485 628 aa10.25□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Sbk3P0C5K0 361 aa10.25□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Kcnj4P52189 445 aa10.25□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Caprin2Q05A80 1031 aaKnown RBP10.25□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Bicc1Q99MQ1 977 aaKnown RBP10.25□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Fam133bQ9CVI2 245 aaKnown RBP10.25□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Armc9Q9D2I5 817 aa10.25□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Polr3cQ9D483 533 aa10.25□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Capn12Q9ER56 720 aa10.25□□□□□ -0.77
Ccdc71-202ENSMUST00000193170 Cnksr1A2A9K7 700 aa10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms