RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Ktn1Q61595 1327 aaKnown RBP8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 A0A1W2P6Q8 802 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 Gm9048A0A1W2P7H4 802 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 A0A1W2P7Z8 802 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 Gm9046A0A1W2P855 802 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 Cfap70D3YVL2 1141 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 Myo1bP46735 1107 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 Eef2P58252 858 aaKnown RBP8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 AaasP58742 546 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 Pfkfb1P70266 471 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 MycbpapQ5SUV2 932 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 Cyp7b1Q60991 507 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 Pcdhb14Q6PB90 796 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 Sass6Q80UK7 654 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 Gpr150Q8BL07 427 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 Zfp202Q8C879 641 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 Pcdhb15Q91Y04 786 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 Dusp10Q9ESS0 483 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 Myh8P13542 1937 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 Igsf9bE9PZ19 1328 aa8.64□□□□□ -1.03
Trim40-201ENSMUST00000087158 Tpd52l1O54818 204 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Usp5P56399 858 aaKnown RBP8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Nxf2Q4ZGD8 691 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Secisbp2lQ6A098 1086 aaKnown RBP8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Cyp4x1Q6A152 507 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Tacc1Q6Y685 774 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 SpidrQ8BGX7 933 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Ccdc150Q8CDI7 1110 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 PygbQ8CI94 843 aaKnown RBP8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 OplahQ8K010 1288 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Fam13bQ8K2H3 851 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Serpina10Q8R121 448 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 AllcQ9JHX6 414 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Frmpd3A0A140LIW3 1774 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Olfr247E9PVJ7 320 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Arid4aF8VPQ2 1261 aaKnown RBP8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Olfr819K7N727 320 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Nfatc2ipO09130 412 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Stx1aO35526 288 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Stag2O35638 1231 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Csf1rP09581 977 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Cdkn1cP49919 348 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 DSCC1Q14AI0 399 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Lamc2Q61092 1191 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 CrkQ64010 304 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Haus7Q8BKT8 364 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Rec8Q8C5S7 591 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Ciapin1Q8WTY4 309 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Lzts2Q91YU6 671 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Krt23Q99PS0 422 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Ifi35Q9D8C4 286 aa8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 Akap8Q9DBR0 687 aaKnown RBP8.63□□□□□ -1.03
Trim40-201ENSMUST00000087158 LdhaP06151 332 aaKnown RBP8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Ms4a1P19437 291 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Alppl2P24823 529 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Klhdc9Q3USL1 350 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Mars2Q499X9 586 aaKnown RBP8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Myo19Q5SV80 963 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Map3k12Q60700 888 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Scnn1aQ61180 699 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Lca5Q80ST9 704 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Glrx3Q9CQM9 337 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Lonrf3Q9D4H7 753 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Trmt112Q9DCG9 125 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 RabggtaQ9JHK4 567 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Hmgn5Q9JL35 406 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Ptf1aQ9QX98 324 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Ccdc88aQ5SNZ0 1873 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 TicrrQ8BQ33 1889 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Cyp26c1B2RXA7 518 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Ppef2O35385 757 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Api5O35841 504 aaKnown RBP8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Dapk3O54784 448 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Trim30aP15533 496 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Kcna3P16390 528 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 RdxP26043 583 aaKnown RBP8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Vcam1P29533 739 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Fdx1P46656 188 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 CebpzP53569 1052 aaKnown RBP8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Rad23bP54728 416 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Spata18Q0P557 537 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Arhgef16Q3U5C8 713 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Prpf4bQ61136 1007 aaKnown RBP8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 CbarpQ66L44 698 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Dnaaf2Q8BPI1 814 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Gtf3c6Q9D8P7 227 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Kcnh3Q9WVJ0 1095 aa8.62□□□□□ -1.03
Trim40-201ENSMUST00000087158 Col5a2Q3U962 1497 aa8.61□□□□□ -1.03
Trim40-201ENSMUST00000087158 Nfil3O08750 462 aa8.61□□□□□ -1.03
Trim40-201ENSMUST00000087158 Cbx1P83917 185 aaKnown RBP8.61□□□□□ -1.03
Trim40-201ENSMUST00000087158 Trappc10Q3TLI0 1259 aa8.61□□□□□ -1.03
Trim40-201ENSMUST00000087158 Armc2Q3URY6 854 aa8.61□□□□□ -1.03
Trim40-201ENSMUST00000087158 Gas2l3Q3UWW6 683 aa8.61□□□□□ -1.03
Trim40-201ENSMUST00000087158 Znf653Q6YND2 615 aa8.61□□□□□ -1.03
Trim40-201ENSMUST00000087158 Gpr101Q80T62 511 aa8.61□□□□□ -1.03
Trim40-201ENSMUST00000087158 KhnynQ80U38 671 aa8.61□□□□□ -1.03
Trim40-201ENSMUST00000087158 E2f4Q8R0K9 410 aa8.61□□□□□ -1.03
Trim40-201ENSMUST00000087158 Yipf1Q91VU1 306 aa8.61□□□□□ -1.03
Trim40-201ENSMUST00000087158 Mtmr4Q91XS1 1190 aa8.61□□□□□ -1.03
Trim40-201ENSMUST00000087158 Tlcd1Q99JT6 247 aa8.61□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 117.7 ms