RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Dpp8Q80YA7 892 aa14.21□□□□□ -0.13
Lig3-202ENSMUST00000080461 Pnma3Q8JZW8 466 aa14.21□□□□□ -0.13
Lig3-202ENSMUST00000080461 Syt10Q9R0N4 523 aa14.21□□□□□ -0.13
Lig3-202ENSMUST00000080461 Rrp1P56183 494 aaKnown RBP14.21□□□□□ -0.14
Lig3-202ENSMUST00000080461 Ccdc162pQ0VG85 912 aa14.21□□□□□ -0.14
Lig3-202ENSMUST00000080461 Anp32cQ64G17 123 aa14.21□□□□□ -0.14
Lig3-202ENSMUST00000080461 Clic6Q8BHB9 596 aa14.21□□□□□ -0.14
Lig3-202ENSMUST00000080461 Ubxn4Q8VCH8 506 aa14.21□□□□□ -0.14
Lig3-202ENSMUST00000080461 Klf15Q9EPW2 415 aa14.21□□□□□ -0.14
Lig3-202ENSMUST00000080461 Hic2Q9JLZ6 619 aaKnown RBP14.21□□□□□ -0.14
Lig3-202ENSMUST00000080461 Pitpnm2Q6ZPQ6 1335 aa14.2□□□□□ -0.14
Lig3-202ENSMUST00000080461 LdhaP06151 332 aaKnown RBP14.2□□□□□ -0.14
Lig3-202ENSMUST00000080461 Arid5bQ8BM75 1188 aaKnown RBP14.2□□□□□ -0.14
Lig3-202ENSMUST00000080461 Znf428Q8C1M2 176 aa14.2□□□□□ -0.14
Lig3-202ENSMUST00000080461 Ppp1r11Q8K1L5 131 aa14.2□□□□□ -0.14
Lig3-202ENSMUST00000080461 GabreA2AMW3 916 aa14.2□□□□□ -0.14
Lig3-202ENSMUST00000080461 A430078G23RikE9Q7Y4 484 aa14.2□□□□□ -0.14
Lig3-202ENSMUST00000080461 Slc27a3O88561 667 aa14.2□□□□□ -0.14
Lig3-202ENSMUST00000080461 Mars2Q499X9 586 aaKnown RBP14.2□□□□□ -0.14
Lig3-202ENSMUST00000080461 Cyp7b1Q60991 507 aa14.2□□□□□ -0.14
Lig3-202ENSMUST00000080461 Fam196bQ6GQV1 535 aa14.2□□□□□ -0.14
Lig3-202ENSMUST00000080461 Cep120Q7TSG1 988 aa14.2□□□□□ -0.14
Lig3-202ENSMUST00000080461 PaoxQ8C0L6 504 aa14.2□□□□□ -0.14
Lig3-202ENSMUST00000080461 Gtf3c5Q8R2T8 520 aa14.2□□□□□ -0.14
Lig3-202ENSMUST00000080461 Mical1Q8VDP3 1048 aa14.2□□□□□ -0.14
Lig3-202ENSMUST00000080461 Ccdc173A0JLY1 547 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 Nfil3O08750 462 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 Dapk3O54784 448 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 Armc2Q3URY6 854 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 Madcam1Q61826 405 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 Kcnf1Q7TSH7 493 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 MbipQ99LQ1 341 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 Gucy1a2F8VQK3 730 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 CnpP16330 420 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 Pex1Q5BL07 1284 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 Nsrp1Q5NCR9 542 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 Zbtb39Q6PDK0 712 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 Ttc27Q8CD92 847 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 Nod2Q8K3Z0 1020 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 Ttll1Q91V51 423 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 Krtap5-3Q9D226 196 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 Borcs6Q9D6W8 360 aa14.19□□□□□ -0.14
Lig3-202ENSMUST00000080461 Map3k9Q3U1V8 1077 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Gzf1Q4VBD9 706 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Glra4Q61603 456 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Gga3Q8BMI3 718 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Spire2Q8K1S6 718 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Atxn7Q8R4I1 867 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Luzp1Q8R4U7 1068 aaKnown RBP14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Stx1aO35526 288 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Mindy4Q3UQI9 744 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 CtcfQ61164 736 aaKnown RBP14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Dhx40Q6PE54 779 aaKnown RBP14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Hdac9Q99N13 588 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Tfap4Q9JIZ5 338 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Psmd10Q9Z2X2 231 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Tbc1d9bQ5SVR0 1263 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Grm4Q68EF4 912 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Camkk2Q8C078 588 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Trim11Q99PQ2 467 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Tjap1Q9DCD5 539 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Cd2apQ9JLQ0 637 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Stxbp4Q9WV89 557 aa14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Ktn1Q61595 1327 aaKnown RBP14.18□□□□□ -0.14
Lig3-202ENSMUST00000080461 Hvcn1Q3U2S8 269 aa14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 WaplQ65Z40 1200 aaKnown RBP14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 Tcp11l1Q8BTG3 509 aa14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 Ppm1fQ8CGA0 452 aa14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 Iqca1Q9CUL5 857 aa14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 Homer1Q9Z2Y3 366 aa14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 Gm43738A0A0G2JEA5 862 aa14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 Dnajc25A2ALW5 357 aa14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 Sema3fO88632 785 aa14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 Nedd4P46935 887 aaKnown RBP14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 DSCC1Q14AI0 399 aa14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 Vil1Q62468 827 aa14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 Csrnp2Q8BGQ2 534 aa14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 Ift74Q8BKE9 600 aa14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 Polr2dQ9D7M8 142 aaKnown RBP14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 SmapQ9R0P4 181 aaKnown RBP14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 Kcnh3Q9WVJ0 1095 aa14.17□□□□□ -0.14
Lig3-202ENSMUST00000080461 Atp8b5A3FIN4 1183 aa14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Arhgef16Q3U5C8 713 aa14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Eme2Q56A04 373 aa14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 PRAG1Q571I4 1179 aa14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Rrp12Q6P5B0 1295 aaKnown RBP14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Q8BZJ8 459 aa14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Klhl34A2AI76 644 aa14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Rsph10bE9PYQ0 876 aa14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Mboat4P0C7A3 435 aa14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Kcna1P16388 495 aa14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Mybl2P48972 704 aa14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Cfap157Q0VFX2 523 aa14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Dusp9Q7TNL7 452 aa14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Galnt17Q7TT15 598 aa14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Kctd3Q8BFX3 815 aa14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Smc2Q8CG48 1191 aaKnown RBP14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Epb41l2O70318 988 aaKnown RBP14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Rasgrp4Q8BTM9 673 aa14.16□□□□□ -0.14
Lig3-202ENSMUST00000080461 Tut1Q8R3F9 869 aa14.16□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms