RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Dnm3Q8BZ98 863 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Zfp113Q8C689 439 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Serpinb12Q9D7P9 423 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 SyncQ9EPM5 470 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Pdzd4Q9QY39 772 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Plxnc1Q9QZC2 1574 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Rbm12b2Q66JV4 834 aaKnown RBP10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Znf667Q2TL60 609 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Slc38a10Q5I012 1090 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Map3k12Q60700 888 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Rab34Q64008 259 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 LgsnQ8CIX8 563 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Rbm43Q99J64 343 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Fam217aQ9D9W6 419 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Zcchc17Q9ESX4 241 aaKnown RBP10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Zscan18E9PUD6 809 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Pik3caP42337 1068 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Ano9P86044 747 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Tgfb1i1Q62219 461 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Ctnna3Q65CL1 895 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Bola2Q8BGS2 86 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Lzts2Q91YU6 671 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Usp19Q3UJD6 1360 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Idi1P58044 227 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Serpinb13Q8CDC0 389 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Tnpo2Q99LG2 887 aaKnown RBP10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Saal1Q9D2C2 474 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Ift81O35594 676 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Fam207aP58468 219 aaKnown RBP10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Lrriq3Q14DL3 633 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Wdr44Q6NVE8 915 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Cdc23Q8BGZ4 597 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Dnajc17Q91WT4 303 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 MesdQ9ERE7 224 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Parp2O88554 559 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Slc10a4Q3UEZ8 437 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Ankrd13cQ3UX43 541 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Caps2Q8BUG5 550 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Cd209bQ8CJ91 325 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Mfap3Q922T2 349 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Disp3A3KFU9 1347 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Nub1P54729 614 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Ubn2Q80WC1 1314 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Lmtk2Q3TYD6 1471 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Krt18P05784 423 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Ca8P28651 291 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Swap70Q6A028 585 aaKnown RBP10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Gbp9Q8BTS3 619 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Rsph3bQ9DA80 389 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Cst12Q9DAN8 128 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 1700029H14RikE9PY36 240 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Tcp1P11983 556 aaKnown RBP10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Ftl2P49945 183 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Ptch1Q61115 1434 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 GopcQ8BH60 463 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Dnaaf2Q8BPI1 814 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Vps37bQ8R0J7 285 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Scyl1Q9EQC5 806 aaKnown RBP10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Copb1Q9JIF7 953 aa10.32□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Fmn2Q9JL04 1578 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 AatkQ80YE4 1365 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Syde2E9PUP1 1314 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Pus7B7ZNL8 666 aaKnown RBP10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Nom1Q3UFM5 854 aaKnown RBP10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Madcam1Q61826 405 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Gimap7Q8R379 293 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 MycbpQ9EQS3 103 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Foxp1P58462 705 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Large2Q5XPT3 690 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Fkbp3Q62446 224 aaKnown RBP10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Atad2Q8CDM1 1040 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Taco1Q8K0Z7 294 aaKnown RBP10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Pold4Q9CWP8 107 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Heatr4E9Q357 955 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Cpsf2O35218 782 aaKnown RBP10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Bbs9Q811G0 885 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Rcn2Q8BP92 320 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Gdap1l1Q8VE33 370 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Ifi35Q9D8C4 286 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Ddx24Q9ESV0 857 aaKnown RBP10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Gm9992B2RWK3 458 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Nr1i2O54915 431 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Nhej1Q3KNJ2 295 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Gm5168Q4KL04 211 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Trim28Q62318 834 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Bend3Q6PAL0 825 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Unc93aQ710D3 458 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Ankrd49Q8VE42 238 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Nxf1Q99JX7 618 aaKnown RBP10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Pex3Q9QXY9 372 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Ankrd2Q9WV06 328 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Cpb1B2RS76 415 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 HarsQ61035 509 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Naa35Q6PHQ8 725 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Bola3Q8CEI1 110 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Aox2Q5SGK3 1345 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Adcy8P97490 1249 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Lonp1Q8CGK3 949 aaKnown RBP10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Emilin2Q8K482 1074 aa10.31□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Antxr1Q9CZ52 562 aa10.31□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms