RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Tmem87aQ8BXN9 555 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Themis2Q91YX0 663 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Ttc14Q9CSP9 761 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Creld2Q9CYA0 350 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Dydc1Q9D9T0 175 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 IkQ9Z1M8 557 aaKnown RBP10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 NpcdF8VQB8 469 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Arhgef16Q3U5C8 713 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Ankrd13cQ3UX43 541 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 TxlnaQ6PAM1 554 aaKnown RBP10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Pus7lQ8CE46 702 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Gimap7Q8R379 293 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Tspyl4Q8VD63 406 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Vps33aQ9D2N9 598 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Bcl2l12Q9D3J3 255 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Ccdc83Q9D4V3 305 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Klhl40Q9D783 621 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Crb1Q8VHS2 1405 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Gm5934D3Z4U6 212 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Celf1P28659 486 aaKnown RBP10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Gjb4Q02738 266 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Olfr118Q7TRJ6 321 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Ccdc172Q810N9 267 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Alx1Q8C8B0 326 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Paf1Q8K2T8 535 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Tada3Q8R0L9 432 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Tktl2Q9D4D4 627 aa10.93□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Nck2O55033 380 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Kdm1aQ6ZQ88 853 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Prpf40bQ80W14 870 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Tgs1Q923W1 853 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Fam217aQ9D9W6 419 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Pkd2l2Q9JLG4 621 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 MthfslL7N466 203 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Tuft1O08970 390 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Calm1P0DP26 149 aaKnown RBP10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Calm2P0DP27 149 aaKnown RBP10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Calm3P0DP28 149 aaKnown RBP10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Mkrn3Q60764 544 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Cdc23Q8BGZ4 597 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Srp68Q8BMA6 625 aaKnown RBP10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Eif2ak3Q9Z2B5 1114 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Ddx60E9PZQ1 1711 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Lmtk3Q5XJV6 1424 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 ByslO54825 436 aaKnown RBP10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Stat5bP42232 786 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 LtbrP50284 415 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Eif3j1Q3UGC7 261 aaKnown RBP10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Hdhd2Q3UGR5 259 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Eme2Q56A04 373 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Eif3j2Q66JS6 263 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Kif1bpQ6ZPU9 617 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Cfap100Q80VN0 613 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Bicdl2Q8CHW5 507 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Srgap2Q91Z67 1071 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Copb1Q9JIF7 953 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Golga5Q9QYE6 729 aa10.92□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Zfp853A0A1D5RM95 733 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 ErmardE9Q048 622 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 InhbeO08717 350 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Ccdc148Q6P5U8 527 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Sval3Q76I99 144 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Anks1bQ8BIZ1 1259 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Fbxl16A2RT62 479 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Ugt1a8D3Z748 530 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Ugt1a10E9PXN7 530 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Fam89aQ14BJ1 175 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Krit1Q6S5J6 736 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Slc39a11Q8BWY7 342 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Q9D5Q8 446 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Pex3Q9QXY9 372 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Gja10Q9WUS4 505 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Prss40A6H6T1 365 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Acad12D3Z7X0 555 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Ube3aO08759 870 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Rps8P62242 208 aaKnown RBP10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 QarsQ8BML9 775 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Tc2nQ91XT6 489 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Ccdc105Q9D4K7 499 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 AatfQ9JKX4 526 aaKnown RBP10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Gpaa1Q9WTK3 621 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 CpdO89001 1377 aa10.91□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 LbrQ3U9G9 626 aaKnown RBP10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Prkag3Q8BGM7 489 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Mettl5Q8K1A0 209 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Nfxl1E9Q8I7 918 aaKnown RBP10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Casp12O08736 419 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Ube3cQ80U95 1083 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Rab11fip4Q8BQP8 635 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 AdpgkQ8VDL4 496 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Gm1993A6X8I0 212 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 SlxD3Z347 212 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Ube4aE9Q735 1028 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Gucy1a2F8VQK3 730 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Cyp3a25O09158 503 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Cct5P80316 541 aaKnown RBP10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Ccdc42Q5SV66 316 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Znf526Q8BI66 675 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Cc2d1bQ8BRN9 848 aa10.9□□□□□ -0.66
Pcdh1-201ENSMUST00000057185 Dnajc17Q91WT4 303 aa10.9□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms