RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Pcdha12Q91Y18 950 aa18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Gm5134E9QAB5 671 aa18.14■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Kctd3Q8BFX3 815 aa18.14■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Tmem60Q8K174 133 aa18.14■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Tcp11l2Q8K1H7 517 aa18.14■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Tbx2Q60707 711 aa18.14■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Cnga2Q62398 664 aa18.14■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Sval3Q76I99 144 aa18.14■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Apol10aQ8CCA5 318 aa18.14■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Slc51aQ8R000 340 aa18.14■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Klhl10Q9D5V2 608 aa18.14■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Rps6ka4Q9Z2B9 773 aa18.14■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Sel1lQ9Z2G6 790 aa18.14■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Nr5a1P33242 462 aa18.14■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Ppp2r5bQ6PD28 497 aa18.14■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Cd209bQ8CJ91 325 aa18.14■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Ubxn8Q9QZ49 277 aa18.14■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Myo3bQ1EG27 1305 aa18.13■□□□□ 0.49
Ckap4-201ENSMUST00000053871 FAM186AQ9D9R9 1790 aa18.13■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Irx2P81066 474 aa18.13■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Kcnd1Q03719 651 aa18.13■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Gucy2cQ3UWA6 1072 aa18.13■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Rc3h1Q4VGL6 1130 aaKnown RBP18.13■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Mtfr1lQ9CWE0 289 aa18.13■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Sorbs3Q9R1Z8 733 aa18.13■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Clip2Q9Z0H8 1047 aa18.13■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Nhsl1Q8CAF4 1587 aa18.13■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Slc39a2G3X943 309 aa18.13■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Mxd3Q80US8 206 aa18.13■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Vps33aQ9D2N9 598 aa18.13■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Cul4bA2A432 970 aaKnown RBP18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Ccdc191J3QQ27 883 aa18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Zhx1P70121 873 aa18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Trak2Q6P9N8 913 aa18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Zswim4Q8C7B8 1101 aa18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Mfap3Q922T2 349 aa18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Cfap45Q9D9U9 551 aa18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Myh15E9Q264 1925 aa18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Pfkfb3A7UAK5 555 aa18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Txndc16Q7TN22 820 aa18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Cyp4f39Q8BGU0 532 aa18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 RtcbQ99LF4 505 aaKnown RBP18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Usp5P56399 858 aaKnown RBP18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 DSCC1Q14AI0 399 aa18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Slc9a1Q61165 820 aa18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Brms1Q99N20 246 aa18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Lonp2Q9DBN5 852 aa18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 AmfrQ9R049 643 aa18.12■□□□□ 0.49
Ckap4-201ENSMUST00000053871 MthfslL7N466 203 aa18.11■□□□□ 0.49
Ckap4-201ENSMUST00000053871 PpardP35396 440 aa18.11■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Myo19Q5SV80 963 aa18.11■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Mrps31Q61733 384 aaKnown RBP18.11■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Ncoa7Q6DFV7 943 aa18.11■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Tacc1Q6Y685 774 aa18.11■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Tmco3Q8BH01 678 aa18.11■□□□□ 0.49
Ckap4-201ENSMUST00000053871 NelfbQ8C4Y3 580 aa18.11■□□□□ 0.49
Ckap4-201ENSMUST00000053871 MeiocA2AG06 965 aa18.11■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Plekha7Q3UIL6 1118 aaKnown RBP18.11■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Armc2Q3URY6 854 aa18.11■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Kcna1P16388 495 aa18.1■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Cep131Q62036 1060 aa18.1■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Ctdp1Q7TSG2 960 aa18.1■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Pdcd6ipQ9WU78 869 aaKnown RBP18.1■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Ano3A2AHL1 981 aa18.1■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Eif6O55135 245 aa18.1■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Tmtc2Q56A06 836 aa18.1■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Dnph1Q80VJ3 173 aa18.1■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Q8CEZ4 452 aa18.1■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Calml3Q9D6P8 149 aa18.1■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Epb41l3Q9WV92 929 aa18.1■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Ccdc51Q3URS9 406 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Rasal3Q8C2K5 1041 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Slc44a4Q91VA1 707 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Gm30191A0A0U1RNT7 187 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 4932429P05RikA2ADI4 785 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Ppfibp2O35711 882 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Islr2Q5RKR3 745 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Atp1a2Q6PIE5 1020 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Slc5a4bQ91ZP4 660 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Cd2apQ9JLQ0 637 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Nr2e3Q9QXZ7 395 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Kndc1Q0KK55 1742 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Nup98Q6PFD9 1816 aaKnown RBP18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Scgb2b18A0A087WPA9 112 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 A0A1W2P6Q8 802 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Gm9048A0A1W2P7H4 802 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 A0A1W2P7Z8 802 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Gm9046A0A1W2P855 802 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Pak1O88643 545 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 LrmpQ60664 539 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Hspa4Q61316 841 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Hdac4Q6NZM9 1076 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Mad2l2Q9D752 211 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Pex3Q9QXY9 372 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Col20a1Q923P0 1320 aa18.09■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Gm5580A0A0N4SVP8 411 aa18.08■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Gm3893E9Q1I1 302 aa18.08■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Tdo2P48776 406 aa18.08■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Scrn1Q9CZC8 414 aa18.08■□□□□ 0.49
Ckap4-201ENSMUST00000053871 Uchl5Q9WUP7 329 aa18.08■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms