RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Enc1O35709 589 aa10.35□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Spout1Q3UHX9 385 aaKnown RBP10.35□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Erich4Q3UNU4 136 aa10.35□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Cep63Q3UPP8 700 aa10.35□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Cep85Q8BMK0 761 aa10.35□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Prl7b1Q8CGZ9 251 aa10.35□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 PhaxQ9JJT9 385 aaKnown RBP10.35□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 PfasQ5SUR0 1337 aa10.35□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Ankrd35E9Q9D8 996 aa10.35□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 CalrP14211 416 aaKnown RBP10.35□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 C87499Q3UX49 493 aa10.35□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Ccdc73Q8CDM4 1066 aa10.35□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Tspyl4Q8VD63 406 aa10.35□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Tab2Q99K90 693 aa10.35□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 NapgQ9CWZ7 312 aa10.35□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Simc1E9Q6E9 1354 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Dhx8A2A4P0 1244 aaKnown RBP10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Gm4307E9PZY4 289 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Dnajc21E9Q8D0 531 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Gm4312K9J7E2 289 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Arhgap6O54834 987 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Ckap2Q3V1H1 664 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Spty2d1Q68FG3 682 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 CactinQ9CS00 772 aaKnown RBP10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Kat6bQ8BRB7 1872 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Gm28042B7ZCM9 1014 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Phldb3E9QAF4 648 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Pkn1P70268 946 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Acsbg2Q2XU92 667 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Drc7Q6V3W6 876 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 IqcgQ80W32 419 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Tcp11l1Q8BTG3 509 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Eif3hQ91WK2 352 aaKnown RBP10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Emilin1Q99K41 1017 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Klc4Q9DBS5 619 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Chrna9G3X8Z7 479 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Nck2O55033 380 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Dnm1P39053 867 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Cyp4x1Q6A152 507 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Exoc8Q6PGF7 716 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Tmem87bQ8BKU8 555 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Kcnj14Q8JZN3 434 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Znfx1Q8R151 1909 aaKnown RBP10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Igsf9bE9PZ19 1328 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Ccdc24E9PUW8 296 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Zbtb21E9Q444 1094 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 AK157302I3ITR1 129 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Exoc4O35382 975 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 ItpripQ3TNL8 555 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Kif2bQ8C0N1 668 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Mfap3Q922T2 349 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 Isca1Q9D924 129 aa10.34□□□□□ -0.75
Ccdc171-201ENSMUST00000053414 4932429P05RikA2ADI4 785 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Lamb3Q61087 1168 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Myl10Q62082 202 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Ccdc39Q9D5Y1 937 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Abhd2Q9QXM0 425 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Scp2P32020 547 aaKnown RBP10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 RcvrnP34057 202 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Plekha7Q3UIL6 1118 aaKnown RBP10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Rap1gap2Q5SVL6 712 aaKnown RBP10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Gngt1Q61012 74 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Ddx3xQ62167 662 aaKnown RBP10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Ccdc83Q9D4V3 305 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Cfap99A0A140LIX9 648 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Cyp2j7A0A140T8U1 504 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Pex1Q5BL07 1284 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Larp6Q8BN59 492 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Eno4Q8C042 619 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Parp10Q8CIE4 960 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Ncoa5Q91W39 579 aaKnown RBP10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 RpainQ9CWY9 219 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Ppil4Q9CXG3 492 aaKnown RBP10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Zcrb1Q9CZ96 217 aaKnown RBP10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Scrn1Q9CZC8 414 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Dnajc10Q9DC23 793 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Fbxo3Q9DC63 480 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 GdaQ9R111 454 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Entpd5Q9WUZ9 427 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Peg12Q9WVA7 283 aa10.33□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 CatspereP0DP43 985 aa10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Pde3bQ61409 1100 aa10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Trim6Q8BGE7 488 aa10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Caps2Q8BUG5 550 aa10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 OplahQ8K010 1288 aa10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Mrpl12Q9DB15 201 aaKnown RBP10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Ltn1Q6A009 1767 aa10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Nap1l2P51860 460 aa10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Rnpc3Q3UZ01 514 aaKnown RBP10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Tjap1Q9DCD5 539 aa10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Eif5P59325 429 aaKnown RBP10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Ttc26Q8BS45 554 aa10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 NkrfQ8BY02 690 aaKnown RBP10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Cdc45Q9Z1X9 566 aa10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Slc12a2P55012 1205 aa10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Lig3P97386 1015 aa10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Cnnm4Q69ZF7 771 aa10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Znf653Q6YND2 615 aa10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Ctdp1Q7TSG2 960 aa10.32□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 ParnQ8VDG3 624 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms