RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Surf1P09925 306 aa18.21■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Ppp1r13bQ62415 1087 aa18.21■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Ccdc50Q810U5 305 aaKnown RBP18.21■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Ubn1Q4G0F8 1135 aa18.21■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 EsrrgP62509 458 aa18.21■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Ulk4Q3V129 1303 aa18.21■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Cyp26b1Q811W2 512 aa18.21■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Cct6aP80317 531 aaKnown RBP18.21■□□□□ 0.51
Ccdc88a-201ENSMUST00000040182 Pik3caP42337 1068 aa18.21■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Herc4Q6PAV2 1057 aa18.21■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Evi5P97366 809 aa18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Nbr1P97432 988 aa18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Anapc5Q8BTZ4 740 aa18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Plagl1Q9JLQ4 704 aa18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Cul4bA2A432 970 aaKnown RBP18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Nr1i2O54915 431 aa18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Stk38lQ7TSE6 464 aa18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Cabcoco1Q8CDT7 208 aa18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Dars2Q8BIP0 653 aa18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 RtcbQ99LF4 505 aaKnown RBP18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Dach1Q9QYB2 751 aa18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Dync1i2O88487 612 aaKnown RBP18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Q6PD19 689 aa18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Wdr3Q8BHB4 942 aaKnown RBP18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Enox2Q8R0Z2 598 aa18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Osbpl1aQ91XL9 950 aa18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Utp11Q9CZJ1 253 aaKnown RBP18.2■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Abcc4E9Q236 1325 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Slc30a9Q5IRJ6 567 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Armcx3Q8BHS6 379 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 RabggtaQ9JHK4 567 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Gm1661E9Q963 441 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Cep85Q8BMK0 761 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Stx17Q9D0I4 301 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Tsr1Q5SWD9 803 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Wdr44Q6NVE8 915 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Trim21Q62191 470 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Acsl3Q9CZW4 720 aaKnown RBP18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Cnpy2Q9QXT0 182 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Syne3Q4FZC9 975 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 SympkQ80X82 1284 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Klhl7Q8BUL5 586 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Ppp6r3Q922D4 844 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Cyb5rlB1AS42 316 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Abcc2Q8VI47 1543 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Zfyve27Q3TXX3 415 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Khdrbs1Q60749 443 aaKnown RBP18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Mtss1lQ6P9S0 715 aa18.19■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Vamp4O70480 141 aa18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Myo1aO88329 1043 aa18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Sult6b1P0CC03 303 aa18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Diaph3Q9Z207 1171 aa18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Ccdc84Q4VA36 332 aaKnown RBP18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Trerf1Q8BXJ2 1205 aa18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Ptcd1Q8C2E4 695 aaKnown RBP18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 RragaQ80X95 313 aa18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Dennd4bQ3U1Y4 1499 aa18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Adcy8P97490 1249 aa18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Mettl14Q3UIK4 456 aa18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Fkbp3Q62446 224 aaKnown RBP18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Eif4a2P10630 407 aa18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Spdl1Q923A2 608 aa18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Ppp1r7Q3UM45 361 aa18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Ttll7A4Q9F0 912 aa18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Mtmr7Q9Z2C9 660 aa18.18■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Tnnc2P20801 160 aa18.17■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Cracr2bQ80ZJ8 394 aa18.17■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Cyp27a1Q9DBG1 533 aa18.17■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Ankfy1Q810B6 1169 aa18.17■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Lrrc8cQ8R502 803 aa18.17■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Eya2O08575 532 aa18.17■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Gucy2eP52785 1108 aa18.17■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Sestd1Q80UK0 696 aa18.17■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Tubgcp2Q921G8 905 aa18.17■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Mtx1P47802 317 aa18.17■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Fam170aQ66LM6 333 aa18.17■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Mtrf1lQ8BJU9 373 aa18.17■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Timm44O35857 452 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Atf2P16951 487 aaKnown RBP18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Mier3Q3UHF3 551 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Tmx1Q8VBT0 278 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 PzpQ61838 1495 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Tom1O88746 492 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Myo1fP70248 1099 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Irx1P81068 480 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Zc3h18Q0P678 948 aaKnown RBP18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Zfp51Q3U4L8 781 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Tmtc4Q8BG19 741 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Polr2bQ8CFI7 1174 aaKnown RBP18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Ccdc138Q0VF22 680 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Itga6Q61739 1091 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Nkiras1Q8CEC5 192 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Vps37bQ8R0J7 285 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Mylk2Q8VCR8 613 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 TnnQ80Z71 1560 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Scyl1Q9EQC5 806 aaKnown RBP18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Fmnl1Q9JL26 1094 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Ccdc92bQ5SUE3 299 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Rhpn1Q61085 643 aa18.16■□□□□ 0.5
Ccdc88a-201ENSMUST00000040182 Nuak1Q641K5 658 aa18.16■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms