RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Vps41Q5KU39 853 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Gm5169Q5M8P2 212 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Usp54Q8BL06 1588 aaKnown RBP20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Spc24Q9D083 201 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Angptl3Q9R182 455 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Suclg2Q9Z2I8 433 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Med23Q80YQ2 1367 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 1700029H14RikE9PY36 240 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Acot10Q32MW3 439 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Lrp2bpQ9D4C6 346 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Mdh1P14152 334 aa20.43■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Caprin2Q05A80 1031 aaKnown RBP20.43■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Pex3Q9QXY9 372 aa20.43■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Med14A2ABV5 1459 aaKnown RBP20.43■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Speer2E9Q9U2 264 aa20.43■□□□□ 0.86
Ebf3-201ENSMUST00000033378 NpeppsQ11011 920 aa20.43■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Ankrd13dQ6PD24 605 aa20.43■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Zfp174B9EJW5 407 aa20.43■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Atp2a2O55143 1044 aaKnown RBP20.43■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Fam228bQ497Q6 232 aa20.43■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Bag2Q91YN9 210 aa20.43■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Eid1Q9DCR4 169 aa20.43■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Card10P58660 1021 aa20.43■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Gm6121L7MUF1 212 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Atp6v1aP50516 617 aaKnown RBP20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Tut1Q8R3F9 869 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Ube3bQ9ES34 1070 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Myl7Q9QVP4 175 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Scyl2Q8CFE4 930 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Znf830Q8R1N0 363 aaKnown RBP20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Dusp10Q9ESS0 483 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Col1a2Q01149 1372 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Znf667Q2TL60 609 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Wdr17E9Q271 1322 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Snapc4Q8BP86 1333 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Kiaa1551Q5DTW7 1521 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Krt19P19001 403 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Sox5P35710 763 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 SbdsP70122 250 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 NeblQ0II04 452 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 1700013D24RikQ0P521 120 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Armc2Q3URY6 854 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Haus6Q6NV99 933 aaKnown RBP20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Tbx22Q8K402 517 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Lzts2Q91YU6 671 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Magi2Q9WVQ1 1275 aa20.42■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Xrcc6P23475 608 aa20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Ehd2Q8BH64 543 aa20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 1700020D05RikQ99PB1 294 aa20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Plcb1Q9Z1B3 1216 aa20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Zfp804bA0A0G2JGH6 1343 aa20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Kif1bQ60575 1816 aaKnown RBP20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Parp1P11103 1013 aaKnown RBP20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Eps15P42567 897 aa20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Mybl2P48972 704 aa20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Ccdc129Q14B48 1034 aa20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Spata4Q8K3V1 295 aa20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Atp1a1Q8VDN2 1023 aaKnown RBP20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Slain2Q8CI08 581 aa20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 RabggtaQ9JHK4 567 aa20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Epb41l3Q9WV92 929 aa20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Bfsp1A2AMT1 669 aa20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Kifap3P70188 793 aa20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Psmd1Q3TXS7 953 aa20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Prc1Q99K43 603 aaKnown RBP20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Hdac9Q99N13 588 aa20.41■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Sval3Q76I99 144 aa20.4■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Stk38lQ7TSE6 464 aa20.4■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Anks1bQ8BIZ1 1259 aa20.4■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Eif2aQ8BJW6 581 aaKnown RBP20.4■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Fam204aQ8C6C7 236 aa20.4■□□□□ 0.86
Ebf3-201ENSMUST00000033378 CoblQ5NBX1 1337 aaKnown RBP20.4■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Zscan18E9PUD6 809 aa20.4■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Madcam1Q61826 405 aa20.4■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Vat1lQ80TB8 417 aa20.4■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Dbndd1Q9CZ00 160 aa20.4■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Fsip1Q9D3V5 435 aa20.4■□□□□ 0.86
Ebf3-201ENSMUST00000033378 AatfQ9JKX4 526 aaKnown RBP20.4■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Stk39Q9Z1W9 556 aa20.4■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Lrrc43Q3V0L5 667 aa20.4■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Zc3h6Q8BYK8 1177 aa20.4■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Kctd16Q5DTY9 427 aa20.39■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Nhej1Q3KNJ2 295 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 Trappc10Q3TLI0 1259 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 Cdc37Q61081 379 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 Slc44a1Q6X893 653 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 Camk4P08414 469 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 Golga1Q9CW79 758 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 Gm28042B7ZCM9 1014 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 Tuft1O08970 390 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 Map3k9Q3U1V8 1077 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 MaeaQ4VC33 396 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 Nsrp1Q5NCR9 542 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 Tbc1d9bQ5SVR0 1263 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 Kcnf1Q7TSH7 493 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 Bbs9Q811G0 885 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 Slc35g1Q8BY79 368 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 Slc5a4bQ91ZP4 660 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 Atad3Q925I1 591 aa20.39■□□□□ 0.85
Ebf3-201ENSMUST00000033378 Sh3tc1G3X9F6 1346 aa20.39■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms