RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 SkiQ60698 725 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Slc17a8Q8BFU8 601 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 QarsQ8BML9 775 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 MesdQ9ERE7 224 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Tex13c2A0A0G2JGA3 530 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Ccdc85cE9Q6B2 420 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Camk4P08414 469 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Krt14Q61781 484 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Bbs9Q811G0 885 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Caps2Q8BUG5 550 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Abcc12Q80WJ6 1366 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Lcmt1A0A0U1RNF2 332 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Krt19P19001 403 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Ano9P86044 747 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Cacna2d2Q6PHS9 1154 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Fgd5Q80UZ0 1219 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Rab44Q8CB87 725 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Usp33Q8R5K2 909 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Ddx41Q91VN6 622 aaKnown RBP18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Msantd4Q91YU3 345 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Saal1Q9D2C2 474 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Gdf11Q9Z1W4 405 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Mroh9G5E8L9 891 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Stat5bP42232 786 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Emilin1Q99K41 1017 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Fam178bQ24JP3 464 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Map3k9Q3U1V8 1077 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Tor4aQ8BH02 426 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Kctd6Q8BNL5 237 aa18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Usp42B2RQC2 1324 aaKnown RBP18.34■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 InhbeO08717 350 aa18.33■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Zcrb1Q9CZ96 217 aaKnown RBP18.33■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Rad51bO35719 350 aa18.33■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Mier3Q3UHF3 551 aa18.33■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Gm5168Q4KL04 211 aa18.33■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 RbsnQ80Y56 783 aa18.33■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Pagr1bF6V0H0 108 aa18.33■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 XpcP51612 930 aa18.33■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Drc1Q3USS3 753 aa18.33■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Slc38a10Q5I012 1090 aa18.33■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 RgmbQ7TQ33 436 aa18.33■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Spata2Q8K004 515 aa18.33■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Xpo5Q924C1 1204 aaKnown RBP18.33■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Pagr1aQ99L02 253 aa18.33■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Cap2Q9CYT6 476 aa18.33■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Dpf1Q9QX66 387 aa18.33■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Cnbd1B1AWM0 430 aa18.33■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 RilpQ5ND29 369 aa18.33■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Dpp8Q80YA7 892 aa18.33■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Golga5Q9QYE6 729 aa18.33■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 DohhA0A1Y7VJ29 135 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Nr1i2O54915 431 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Pde1bQ01065 535 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Ivns1abpQ920Q8 642 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Pex3Q9QXY9 372 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Pus7B7ZNL8 666 aaKnown RBP18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Rnaseh1O70338 285 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Taok1Q5F2E8 1001 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Znf365Q8BG89 408 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Sh2b1Q91ZM2 756 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 H2-OaQ9QWV1 250 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Krt71Q9R0H5 524 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Usp54Q8BL06 1588 aaKnown RBP18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Ubn2Q80WC1 1314 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Cct6bQ61390 531 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Yars2Q8BYL4 472 aaKnown RBP18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Trmt44Q9D2Q2 713 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Clasp1Q80TV8 1535 aaKnown RBP18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Gna15P30678 374 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Dnm2P39054 870 aaKnown RBP18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Psmc4P54775 418 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Trim21Q62191 470 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Ctdspl2Q8BG15 465 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Calcoco1Q8CGU1 691 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Ssx2ipQ8VC66 615 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Cxcl11Q9JHH5 100 aa18.32■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Spata31d1bE9QA57 1361 aa18.31■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Cd3dP04235 173 aa18.31■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Atp6v0a4Q920R6 833 aa18.31■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Dph5Q9CWQ0 281 aa18.31■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Ccdc7Q9D541 371 aa18.31■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Plcb1Q9Z1B3 1216 aa18.31■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Adgrl3Q80TS3 1537 aa18.31■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Aimp1P31230 310 aaKnown RBP18.31■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Tnni3P48787 211 aa18.31■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Krt87Q6IMF0 495 aa18.31■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Zbtb1Q91VL9 713 aa18.31■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Map3k4O08648 1597 aa18.31■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Fyb2A2A995 729 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Art2aP17981 287 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Rad23aP54726 363 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Ankrd23Q812A3 306 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Taf12Q8VE65 161 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 CutaQ9CQ89 177 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Gm4297D3YWB7 211 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Enc1O35709 589 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Copb2O55029 905 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Pik3caP42337 1068 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Myef2Q8C854 591 aaKnown RBP18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Tekt2Q922G7 430 aa18.3■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms