RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Tob2Q9JM55 345 aa12.07□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Casz1Q9CWL2 1761 aa12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Lama4P97927 1816 aa12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Tuft1O08970 390 aa12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Atp6v1aP50516 617 aaKnown RBP12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Acbd5Q5XG73 508 aa12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Sgsm1Q8BPQ7 1093 aa12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Myl6bQ8CI43 207 aa12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 RarsQ9D0I9 660 aaKnown RBP12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Lonp2Q9DBN5 852 aa12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Ugt1a8D3Z748 530 aa12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Ugt1a10E9PXN7 530 aa12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Cyp3a25O09158 503 aa12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Traf1P39428 409 aa12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Specc1lQ2KN98 1118 aaKnown RBP12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Lrrc15Q80X72 579 aa12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 QarsQ8BML9 775 aa12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Phc3Q8CHP6 981 aa12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Emilin2Q8K482 1074 aa12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Slc14a2Q8R4T9 930 aa12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Rbm5Q91YE7 815 aaKnown RBP12.06□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Acad12D3Z7X0 555 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Klhl33G3UW92 533 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 InhbeO08717 350 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Irx1P81068 480 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Snai1Q02085 264 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Mns1Q61884 491 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Uba5Q8VE47 403 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Fam76aQ922G2 307 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 GakQ99KY4 1305 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Tulp1Q9Z273 543 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Akr1c19G3X9Y6 323 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Stag2O35638 1231 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Slc7a1Q09143 622 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 RragbQ6NTA4 374 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Gimap8Q75N62 688 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Spag5Q7TME2 1165 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Rasgrp4Q8BTM9 673 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Slc51aQ8R000 340 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Ccdc12Q8R344 166 aaKnown RBP12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Sorbs3Q9R1Z8 733 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 AfdnQ9QZQ1 1820 aaKnown RBP12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Myh3P13541 1940 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Gm13023A2A8N2 498 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Palm3A2TJV2 734 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 MarcksP26645 309 aaKnown RBP12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Ift88Q61371 824 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Tekt3Q6X6Z7 490 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Ccdc40Q8BI79 1192 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Maats1Q8BRC6 783 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 SowahdQ8BY98 327 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Tgs1Q923W1 853 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Mis12Q9CY25 206 aa12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 SarnpQ9D1J3 210 aaKnown RBP12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Cwc15Q9JHS9 229 aaKnown RBP12.05□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Ube4aE9Q735 1028 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Kcnb1Q03717 857 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Q32P12 615 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Islr2Q5RKR3 745 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Krt40Q6IFX3 439 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Atp1a2Q6PIE5 1020 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Brd3Q8K2F0 726 aaKnown RBP12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 MypopQ8R4U1 393 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Cxcl11Q9JHH5 100 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Dhx8A2A4P0 1244 aaKnown RBP12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Sema6bO54951 886 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Adssl1P28650 457 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Tlr8P58682 1032 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 VmacQ8BP01 174 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Tcp11l2Q8K1H7 517 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Krt82Q99M74 516 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Klhl10Q9D5V2 608 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Arpp21Q9DCB4 807 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Sgpp1Q9JI99 430 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 ChmQ9QXG2 665 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Nek3Q9R0A5 511 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Pdcd6ipQ9WU78 869 aaKnown RBP12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Homer1Q9Z2Y3 366 aa12.04□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Apol7aB2RT54 418 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Nfil3O08750 462 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Ptpn12P35831 775 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Rhbdl3P58873 404 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Klra3Q64329 266 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Adcy2Q80TL1 1090 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Txndc5Q91W90 417 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Tc2nQ91XT6 489 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Rad23bP54728 416 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Mars2Q499X9 586 aaKnown RBP12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 PsdQ5DTT2 1024 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Ctdp1Q7TSG2 960 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Dnph1Q80VJ3 173 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Pramel6Q810Y9 485 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Ano2Q8CFW1 1002 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Pcdha7Q91Y13 937 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Gpaa1Q9WTK3 621 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Vstm4T1NXB5 319 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Myh4Q5SX39 1939 aa12.03□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Gm7347D3YYI9 267 aa12.02□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Speer4aF8VPX6 267 aa12.02□□□□□ -0.48
Ptcd1-201ENSMUST00000031628 Ms4a1P19437 291 aa12.02□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 65.1 ms