RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Stag2O35638 1231 aa17.04■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Actn3O88990 900 aaKnown RBP17.04■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Ptpn12P35831 775 aa17.04■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Ell2Q3UKU1 639 aa17.04■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Dynll2Q9D0M5 89 aa17.04■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Rbm12b2Q66JV4 834 aaKnown RBP17.04■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Rasal3Q8C2K5 1041 aa17.04■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Uba5Q8VE47 403 aa17.04■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Txndc5Q91W90 417 aa17.04■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Gm5134E9QAB5 671 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Pbx1P41778 430 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Trappc10Q3TLI0 1259 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 LrmpQ60664 539 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Lrrc15Q80X72 579 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Tmem60Q8K174 133 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Nat10Q8K224 1024 aaKnown RBP17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Pcdha12Q91Y18 950 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Klhl40Q9D783 621 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Peak1Q69Z38 1735 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Gucy2cQ3UWA6 1072 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Fchsd1Q6PFY1 688 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Apol10aQ8CCA5 318 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Ndufv1Q91YT0 464 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Arfgef1G3X9K3 1846 aaKnown RBP17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Myh13B1AR69 1938 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Znf609Q8BZ47 1413 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Ppef2O35385 757 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Ncoa7Q6DFV7 943 aa17.03■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Scgb2b18A0A087WPA9 112 aa17.02■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Mcm6P97311 821 aa17.02■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Esyt2Q3TZZ7 845 aa17.02■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Ces3aQ63880 571 aa17.02■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Epha10Q8BYG9 1007 aa17.02■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Ulbp1Q8HWA3 334 aa17.02■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Ces3bQ8VCU1 571 aa17.02■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Dock5B2RY04 1868 aa17.02■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Serpinb6bO08804 377 aa17.02■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Mdh1bQ5F204 500 aa17.02■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Slc9a1Q61165 820 aa17.02■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Q8CEZ4 452 aa17.02■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Ccdc12Q8R344 166 aaKnown RBP17.02■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Uchl5Q9WUP7 329 aa17.02■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Epb41l3Q9WV92 929 aa17.02■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Mfap3lQ9D3X9 409 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Nr5a1P33242 462 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Pola2P33611 600 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Traf1P39428 409 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Psmb7P70195 277 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Adam6bQ6IMH7 756 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Fam53cQ8BXQ8 393 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Myl6bQ8CI43 207 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Tcp11l2Q8K1H7 517 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Mtfr1lQ9CWE0 289 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Ubxn8Q9QZ49 277 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Ulk4Q3V129 1303 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Serpina16D3Z660 418 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Scg2Q03517 617 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Olfr121Q5CZY0 321 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Myo19Q5SV80 963 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Hspa4Q61316 841 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 GakQ99KY4 1305 aa17.01■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Ano3A2AHL1 981 aa17■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Pak1O88643 545 aa17■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Cnga2Q62398 664 aa17■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Drc7Q6V3W6 876 aa17■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 NelfbQ8C4Y3 580 aa17■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Fam161bQ8CB59 589 aa17■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 MeiocA2AG06 965 aa17■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Cacna1sQ02789 1880 aa17■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Tacc1Q6Y685 774 aa17■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 GypcQ78HU7 95 aa17■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Pspc1Q8R326 523 aaKnown RBP17■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Rai14Q9EP71 979 aaKnown RBP17■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 EvplQ9D952 2035 aa17■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 C4bP01029 1738 aa17■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 MthfslL7N466 203 aa16.99■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Mrps31Q61733 384 aaKnown RBP16.99■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Smarca1Q6PGB8 1046 aa16.99■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Mad2l2Q9D752 211 aa16.99■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Cd2apQ9JLQ0 637 aa16.99■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Nfil3O08750 462 aa16.99■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 GpiP06745 558 aaKnown RBP16.99■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Spg7Q3ULF4 781 aa16.99■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Arid3aQ62431 601 aa16.99■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Fermt2Q8CIB5 680 aa16.99■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Tex13cD3YU32 604 aa16.99■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Spata32Q8C5V0 334 aa16.99■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 AllcQ9JHX6 414 aa16.99■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Heg1E9Q7X6 1337 aa16.98■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Zfand4D3Z3C6 739 aa16.98■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Tom1O88746 492 aa16.98■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Rad23aP54726 363 aa16.98■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Pramel6Q810Y9 485 aa16.98■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Kctd3Q8BFX3 815 aa16.98■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Tmco3Q8BH01 678 aa16.98■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Wdr3Q8BHB4 942 aaKnown RBP16.98■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Iqcb1Q8BP00 598 aa16.98■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Setdb2Q8C267 713 aa16.98■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Ano2Q8CFW1 1002 aa16.98■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Chrna2Q91X60 512 aa16.98■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 177.1 ms