RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 Zmynd15Q8C0R7 736 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 MrgbpQ9DAT2 204 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Ushbp1Q8R370 680 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 NkapQ9D0F4 415 aaKnown RBP6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Myl7Q9QVP4 175 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Hecw1Q8K4P8 1604 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Zbtb21E9Q444 1094 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Ap1b1O35643 943 aaKnown RBP6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 AcrbpQ3V140 540 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 RilpQ5ND29 369 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Gas7Q60780 421 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 AmphQ7TQF7 686 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Carmil3Q3UFQ8 1375 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Taf4E9QAP7 1042 aaKnown RBP6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Aggf1Q7TN31 711 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Fgd5Q80UZ0 1219 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Prl7a2O54831 253 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Ncf2O70145 525 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Tas2r124Q7M718 309 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Rpap2Q8VC34 614 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 4933428M09RikQ9D3X3 192 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Tex13cD3YU32 604 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Lrriq3Q14DL3 633 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Fam178bQ24JP3 464 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Taf12Q8VE65 161 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Homer2Q9QWW1 354 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Pus7B7ZNL8 666 aaKnown RBP6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Tnnc2P20801 160 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Trmt10cQ3UFY8 414 aaKnown RBP6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Snx14Q8BHY8 964 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Pnpla2Q8BJ56 486 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Kcnv2Q8CFS6 562 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Ndufab1Q9CR21 156 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Nsmce1Q9D720 266 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Trove2O08848 538 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Magi3Q9EQJ9 1476 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Ubac1Q8VDI7 409 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Usp11Q99K46 921 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Luc7l3Q5SUF2 432 aaKnown RBP6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Krt222Q8CCX5 294 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Spata2Q8K004 515 aa6.1□□□□□ -1.43
Vps13d-201ENSMUST00000020441 PpardP35396 440 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Tshz1Q5DTH5 1084 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Vps54Q5SPW0 977 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Frat1P70339 274 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Rapgef1Q3UHC1 1224 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 EspnlQ3UYR4 1005 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Prkab2Q6PAM0 271 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Prpf31Q8CCF0 499 aaKnown RBP6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Qtrt2B8ZXI1 415 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 XpcP51612 930 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Hspd1P63038 573 aaKnown RBP6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Eya3P97480 510 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Cyp24a1Q64441 514 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Sept11Q8C1B7 431 aaKnown RBP6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Bola3Q8CEI1 110 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Parp10Q8CIE4 960 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Eps8l1Q8R5F8 716 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Card14Q99KF0 999 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Vwa3bJ9JI28 736 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Slc27a1Q60714 646 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Bend3Q6PAL0 825 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Glt1d1A4FUP9 346 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Ppp1r1bQ60829 194 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Sap130Q8BIH0 1057 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Anapc5Q8BTZ4 740 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 HibadhQ99L13 335 aaKnown RBP6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Srrm1Q52KI8 946 aaKnown RBP6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Sik1Q60670 779 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Trim21Q62191 470 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Acad11Q80XL6 779 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Q8R1Y2 203 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Pde8bE9Q4S1 865 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Eftud2O08810 971 aaKnown RBP6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Stag1Q9D3E6 1258 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 SyncQ9EPM5 470 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Stox1B2RQL2 990 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Prpf38aQ4FK66 312 aaKnown RBP6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Ttll1Q91V51 423 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Chmp6P0C0A3 200 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Ddx41Q91VN6 622 aaKnown RBP6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 MlklQ9D2Y4 472 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Q9DAQ4 598 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Hmgb3O54879 200 aaKnown RBP6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Syne3Q4FZC9 975 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Cst12Q9DAN8 128 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Hdac6Q9Z2V5 1149 aa6.09□□□□□ -1.43
Vps13d-201ENSMUST00000020441 Ccdc175E9PVB3 822 aa6.09□□□□□ -1.44
Vps13d-201ENSMUST00000020441 Plcb3P51432 1234 aaKnown RBP6.09□□□□□ -1.44
Vps13d-201ENSMUST00000020441 Dcaf15Q6PFH3 600 aa6.09□□□□□ -1.44
Vps13d-201ENSMUST00000020441 WaslQ91YD9 501 aa6.09□□□□□ -1.44
Vps13d-201ENSMUST00000020441 Efcc1Q9JJF6 558 aa6.09□□□□□ -1.44
Vps13d-201ENSMUST00000020441 Capza3P70190 299 aa6.09□□□□□ -1.44
Vps13d-201ENSMUST00000020441 Rab3gap1Q80UJ7 981 aa6.09□□□□□ -1.44
Vps13d-201ENSMUST00000020441 Zfp113Q8C689 439 aa6.09□□□□□ -1.44
Vps13d-201ENSMUST00000020441 Trmt44Q9D2Q2 713 aa6.09□□□□□ -1.44
Vps13d-201ENSMUST00000020441 Xpo4Q9ESJ0 1151 aa6.09□□□□□ -1.44
Vps13d-201ENSMUST00000020441 VrtnQ3SYK4 740 aa6.09□□□□□ -1.44
Vps13d-201ENSMUST00000020441 Ccdc174Q3U155 467 aa6.09□□□□□ -1.44
Vps13d-201ENSMUST00000020441 TrhQ62361 256 aa6.09□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms