RNA–Protein interactions for RNA: YKR020W

VPS51, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS51, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS51YKR020W SWC3P31376 625 aa3.29□□□□□ -1.88
VPS51YKR020W ASK1P35734 292 aa3.29□□□□□ -1.88
VPS51YKR020W SCO2P38072 301 aa3.29□□□□□ -1.88
VPS51YKR020W VBA2P38358 474 aaKnown RBP3.29□□□□□ -1.88
VPS51YKR020W RAD26P40352 1085 aa3.29□□□□□ -1.88
VPS51YKR020W YAT1P80235 687 aa3.29□□□□□ -1.88
VPS51YKR020W CIR2Q08822 631 aa3.29□□□□□ -1.88
VPS51YKR020W TMA7Q3E764 64 aaKnown RBP3.29□□□□□ -1.88
VPS51YKR020W SEC7P11075 2009 aaKnown RBP3.29□□□□□ -1.88
VPS51YKR020W GAL4P04386 881 aa3.28□□□□□ -1.88
VPS51YKR020W KGD2P19262 463 aaPredicted RBP3.28□□□□□ -1.88
VPS51YKR020W RIT1P23796 513 aa3.28□□□□□ -1.88
VPS51YKR020W GRX7P38068 203 aa3.28□□□□□ -1.88
VPS51YKR020W APM3P38153 483 aa3.28□□□□□ -1.88
VPS51YKR020W SPC97P38863 823 aa3.28□□□□□ -1.88
VPS51YKR020W ERV46P39727 415 aa3.28□□□□□ -1.88
VPS51YKR020W FUN12P39730 1002 aaKnown RBP3.28□□□□□ -1.88
VPS51YKR020W CAB2P40506 365 aa3.28□□□□□ -1.88
VPS51YKR020W CFD1P40558 293 aa3.28□□□□□ -1.88
VPS51YKR020W NOP2P40991 618 aaKnown RBP3.28□□□□□ -1.88
VPS51YKR020W PEX8P53248 589 aa3.28□□□□□ -1.88
VPS51YKR020W YPL191CQ08930 360 aa3.28□□□□□ -1.88
VPS51YKR020W POL3P15436 1097 aa3.27□□□□□ -1.89
VPS51YKR020W MAK32P23060 363 aa3.27□□□□□ -1.89
VPS51YKR020W GSH1P32477 678 aa3.27□□□□□ -1.89
VPS51YKR020W STT3P39007 718 aaKnown RBP3.27□□□□□ -1.89
VPS51YKR020W YIR016WP40572 265 aa3.27□□□□□ -1.89
VPS51YKR020W UBX6P47049 396 aa3.27□□□□□ -1.89
VPS51YKR020W ORC5P50874 479 aa3.27□□□□□ -1.89
VPS51YKR020W TAM41P53230 385 aa3.27□□□□□ -1.89
VPS51YKR020W YGR079WP53249 370 aa3.27□□□□□ -1.89
VPS51YKR020W YNL144CP53907 740 aa3.27□□□□□ -1.89
VPS51YKR020W MOT3P54785 490 aaKnown RBP3.27□□□□□ -1.89
VPS51YKR020W YPL068CQ02749 293 aa3.27□□□□□ -1.89
VPS51YKR020W ARA2Q04212 335 aa3.27□□□□□ -1.89
VPS51YKR020W MRPL1Q04599 285 aa3.27□□□□□ -1.89
VPS51YKR020W HIM1Q06674 414 aa3.27□□□□□ -1.89
VPS51YKR020W GET3Q12154 354 aaKnown RBP3.27□□□□□ -1.89
VPS51YKR020W YOR093CQ12275 1648 aa3.26□□□□□ -1.89
VPS51YKR020W COX1P00401 534 aa3.26□□□□□ -1.89
VPS51YKR020W SST2P11972 698 aaKnown RBP3.26□□□□□ -1.89
VPS51YKR020W SWI4P25302 1093 aaKnown RBP3.26□□□□□ -1.89
VPS51YKR020W PTC6P25646 442 aa3.26□□□□□ -1.89
VPS51YKR020W MSS51P32335 436 aa3.26□□□□□ -1.89
VPS51YKR020W YKL133CP36066 463 aa3.26□□□□□ -1.89
VPS51YKR020W IRC8P47046 822 aa3.26□□□□□ -1.89
VPS51YKR020W TEP1P53916 434 aa3.26□□□□□ -1.89
VPS51YKR020W YPL108WQ02872 168 aaPredicted RBP3.26□□□□□ -1.89
VPS51YKR020W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
VPS51YKR020W YBR255C-AQ3E776 120 aa3.26□□□□□ -1.89
VPS51YKR020W YSP2Q06681 1438 aa3.26□□□□□ -1.89
VPS51YKR020W ADE3P07245 946 aaKnown RBP3.25□□□□□ -1.89
VPS51YKR020W YER190C-BP0CX94 160 aa3.25□□□□□ -1.89
VPS51YKR020W YEL077W-AP0CX95 160 aa3.25□□□□□ -1.89
VPS51YKR020W YGR296C-BP0CX96 160 aa3.25□□□□□ -1.89
VPS51YKR020W YPL283W-BP0CX97 160 aa3.25□□□□□ -1.89
VPS51YKR020W YPR204C-AP0CX98 160 aa3.25□□□□□ -1.89
VPS51YKR020W YEF3P16521 1044 aaKnown RBP3.25□□□□□ -1.89
VPS51YKR020W SIR1P21691 654 aa3.25□□□□□ -1.89
VPS51YKR020W LAC1P28496 418 aa3.25□□□□□ -1.89
VPS51YKR020W TOM20P35180 183 aa3.25□□□□□ -1.89
VPS51YKR020W UBP7P40453 1071 aa3.25□□□□□ -1.89
VPS51YKR020W RPL15BP54780 204 aaPredicted RBP3.25□□□□□ -1.89
VPS51YKR020W MET14Q02196 202 aa3.25□□□□□ -1.89
VPS51YKR020W TDA9Q04545 1251 aa3.25□□□□□ -1.89
VPS51YKR020W LEA1Q08963 238 aaPredicted RBP3.25□□□□□ -1.89
VPS51YKR020W SEC18P18759 758 aaKnown RBP3.24□□□□□ -1.89
VPS51YKR020W MGM1P32266 881 aa3.24□□□□□ -1.89
VPS51YKR020W FRD1P32614 470 aaKnown RBP3.24□□□□□ -1.89
VPS51YKR020W SKP2P42843 763 aa3.24□□□□□ -1.89
VPS51YKR020W QRI7P43122 407 aa3.24□□□□□ -1.89
VPS51YKR020W YPT11P48559 417 aa3.24□□□□□ -1.89
VPS51YKR020W ATG21Q02887 496 aa3.24□□□□□ -1.89
VPS51YKR020W ECM22Q05958 814 aaPredicted RBP3.24□□□□□ -1.89
VPS51YKR020W THI3Q07471 609 aa3.24□□□□□ -1.89
VPS51YKR020W RRI1Q12468 440 aa3.24□□□□□ -1.89
VPS51YKR020W SRB8P25648 1427 aa3.24□□□□□ -1.89
VPS51YKR020W DNF3Q12674 1656 aa3.24□□□□□ -1.89
VPS51YKR020W PIF1P07271 859 aa3.23□□□□□ -1.89
VPS51YKR020W PET122P10355 254 aa3.23□□□□□ -1.89
VPS51YKR020W GCD7P32502 381 aaPredicted RBP3.23□□□□□ -1.89
VPS51YKR020W GND1P38720 489 aaKnown RBP3.23□□□□□ -1.89
VPS51YKR020W HIS6P40545 261 aa3.23□□□□□ -1.89
VPS51YKR020W MDV1P47025 714 aa3.23□□□□□ -1.89
VPS51YKR020W YPR003CP53394 754 aa3.23□□□□□ -1.89
VPS51YKR020W YDR109CQ04585 715 aa3.23□□□□□ -1.89
VPS51YKR020W STP3Q05937 343 aa3.23□□□□□ -1.89
VPS51YKR020W MLC2Q06580 163 aa3.23□□□□□ -1.89
VPS51YKR020W IWR1Q07532 353 aaPredicted RBP3.23□□□□□ -1.89
VPS51YKR020W SNA4Q07549 140 aa3.23□□□□□ -1.89
VPS51YKR020W NYV1Q12255 253 aa3.23□□□□□ -1.89
VPS51YKR020W RVB2Q12464 471 aaKnown RBP3.23□□□□□ -1.89
VPS51YKR020W IKI3Q06706 1349 aaKnown RBP3.22□□□□□ -1.89
VPS51YKR020W GAL1P04385 528 aa3.22□□□□□ -1.89
VPS51YKR020W SUI3P09064 285 aaKnown RBP3.22□□□□□ -1.89
VPS51YKR020W YCP4P25349 247 aaKnown RBP3.22□□□□□ -1.89
VPS51YKR020W YUR1P26725 428 aa3.22□□□□□ -1.89
VPS51YKR020W ATO2P32907 282 aa3.22□□□□□ -1.89
VPS51YKR020W YJL107CP42947 387 aa3.22□□□□□ -1.89
VPS51YKR020W ZAP1P47043 880 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms