RNA–Protein interactions for RNA: YHR165C

PRP8, Transcript of Component of U4/U6-U5 snRNP complex, yeastyeast

Gene PRP8, Length 7,242 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP8YHR165C RNH70P53331 553 aa2.8□□□□□ -1.96
PRP8YHR165C DBP6P53734 629 aaKnown RBP2.8□□□□□ -1.96
PRP8YHR165C SHR3Q02774 210 aa2.8□□□□□ -1.96
PRP8YHR165C GTB1Q04924 702 aa2.8□□□□□ -1.96
PRP8YHR165C ACK1Q07622 623 aaPredicted RBP2.8□□□□□ -1.96
PRP8YHR165C TIR4Q12218 487 aaPredicted RBP2.8□□□□□ -1.96
PRP8YHR165C YBR255C-AQ3E776 120 aa2.8□□□□□ -1.96
PRP8YHR165C TRK1P12685 1235 aa2.8□□□□□ -1.96
PRP8YHR165C APE1P14904 514 aa2.8□□□□□ -1.96
PRP8YHR165C KIP1P28742 1111 aa2.8□□□□□ -1.96
PRP8YHR165C BMH1P29311 267 aaKnown RBP2.8□□□□□ -1.96
PRP8YHR165C SYN8P31377 255 aa2.8□□□□□ -1.96
PRP8YHR165C HXT3P32466 567 aaKnown RBP2.8□□□□□ -1.96
PRP8YHR165C NGG1P32494 702 aa2.8□□□□□ -1.96
PRP8YHR165C SKG6P32900 734 aaPredicted RBP2.8□□□□□ -1.96
PRP8YHR165C WHI3P34761 661 aaKnown RBP2.8□□□□□ -1.96
PRP8YHR165C GUA1P38625 525 aaKnown RBP2.8□□□□□ -1.96
PRP8YHR165C EFM1P38732 585 aa2.8□□□□□ -1.96
PRP8YHR165C VHR2P40041 505 aa2.8□□□□□ -1.96
PRP8YHR165C DOT5P40553 215 aa2.8□□□□□ -1.96
PRP8YHR165C PMT6P42934 759 aa2.8□□□□□ -1.96
PRP8YHR165C JJJ2P46997 583 aa2.8□□□□□ -1.96
PRP8YHR165C UBA2P52488 636 aa2.8□□□□□ -1.96
PRP8YHR165C RGC1Q06108 1083 aaKnown RBP2.8□□□□□ -1.96
PRP8YHR165C CSC1Q06538 782 aa2.8□□□□□ -1.96
PRP8YHR165C SEC63P14906 663 aa2.79□□□□□ -1.96
PRP8YHR165C MET16P18408 261 aaPredicted RBP2.79□□□□□ -1.96
PRP8YHR165C MBR1P23493 339 aa2.79□□□□□ -1.96
PRP8YHR165C SEC21P32074 935 aaKnown RBP2.79□□□□□ -1.96
PRP8YHR165C NTH2P35172 780 aa2.79□□□□□ -1.96
PRP8YHR165C MYO3P36006 1272 aa2.79□□□□□ -1.96
PRP8YHR165C SPG5P42933 373 aa2.79□□□□□ -1.96
PRP8YHR165C GYP8P43570 497 aa2.79□□□□□ -1.96
PRP8YHR165C GCV2P49095 1034 aa2.79□□□□□ -1.96
PRP8YHR165C YGR283CP53336 341 aaPredicted RBP2.79□□□□□ -1.96
PRP8YHR165C RPA49Q01080 415 aaPredicted RBP2.79□□□□□ -1.96
PRP8YHR165C UAF30Q08747 228 aa2.79□□□□□ -1.96
PRP8YHR165C YPL216WQ08964 1102 aa2.79□□□□□ -1.96
PRP8YHR165C LEU9Q12166 604 aaKnown RBP2.79□□□□□ -1.96
PRP8YHR165C IZH4Q99393 312 aa2.79□□□□□ -1.96
PRP8YHR165C COX2P00410 251 aa2.79□□□□□ -1.96
PRP8YHR165C CBP6P07253 162 aaPredicted RBP2.79□□□□□ -1.96
PRP8YHR165C RPS7AP26786 190 aaKnown RBP2.79□□□□□ -1.96
PRP8YHR165C KTR1P27810 393 aaKnown RBP2.79□□□□□ -1.96
PRP8YHR165C PLC1P32383 869 aa2.79□□□□□ -1.96
PRP8YHR165C EUG1P32474 517 aa2.79□□□□□ -1.96
PRP8YHR165C AFG2P32794 780 aa2.79□□□□□ -1.96
PRP8YHR165C MRPL11P36521 249 aaPredicted RBP2.79□□□□□ -1.96
PRP8YHR165C YRO2P38079 344 aa2.79□□□□□ -1.96
PRP8YHR165C NCL1P38205 684 aaKnown RBP2.79□□□□□ -1.96
PRP8YHR165C VPS29P38759 282 aa2.79□□□□□ -1.96
PRP8YHR165C CTM1P38818 585 aa2.79□□□□□ -1.96
PRP8YHR165C VID28P40547 921 aa2.79□□□□□ -1.96
PRP8YHR165C YGR266WP53326 701 aa2.79□□□□□ -1.96
PRP8YHR165C TIM44Q01852 431 aa2.79□□□□□ -1.96
PRP8YHR165C TRS120Q04183 1289 aa2.79□□□□□ -1.96
PRP8YHR165C YLR446WQ06204 433 aa2.79□□□□□ -1.96
PRP8YHR165C POM152P39685 1337 aa2.79□□□□□ -1.96
PRP8YHR165C TCP1P12612 559 aaKnown RBP2.79□□□□□ -1.96
PRP8YHR165C CBF1P17106 351 aa2.79□□□□□ -1.96
PRP8YHR165C SIS1P25294 352 aaKnown RBP2.79□□□□□ -1.96
PRP8YHR165C PPH3P32345 308 aa2.79□□□□□ -1.96
PRP8YHR165C GRE3P38715 327 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
PRP8YHR165C RTC3P38804 111 aaPredicted RBP2.79□□□□□ -1.96
PRP8YHR165C ALG5P40350 334 aa2.79□□□□□ -1.96
PRP8YHR165C NPA3P47122 385 aa2.79□□□□□ -1.96
PRP8YHR165C YGL140CP53120 1219 aa2.79□□□□□ -1.96
PRP8YHR165C TIM50Q02776 476 aa2.79□□□□□ -1.96
PRP8YHR165C RLI1Q03195 608 aaKnown RBP2.79□□□□□ -1.96
PRP8YHR165C LEA1Q08963 238 aaPredicted RBP2.79□□□□□ -1.96
PRP8YHR165C ADH7P25377 361 aa2.79□□□□□ -1.96
PRP8YHR165C MSG5P38590 489 aa2.79□□□□□ -1.96
PRP8YHR165C MNL1P38888 796 aa2.79□□□□□ -1.96
PRP8YHR165C SMB1P40018 196 aaKnown RBP2.79□□□□□ -1.96
PRP8YHR165C NUT1P53114 1132 aa2.79□□□□□ -1.96
PRP8YHR165C YPR078CQ06813 372 aa2.79□□□□□ -1.96
PRP8YHR165C ASR1Q06834 288 aa2.79□□□□□ -1.96
PRP8YHR165C YDL124WQ07551 312 aaKnown RBP2.79□□□□□ -1.96
PRP8YHR165C YIG1Q08956 461 aa2.79□□□□□ -1.96
PRP8YHR165C TAF10Q12030 206 aa2.79□□□□□ -1.96
PRP8YHR165C RPL7BQ12213 244 aaKnown RBP2.79□□□□□ -1.96
PRP8YHR165C PHO13P19881 312 aa2.79□□□□□ -1.96
PRP8YHR165C KAP122P32767 1081 aa2.79□□□□□ -1.96
PRP8YHR165C TIP20P33891 701 aa2.79□□□□□ -1.96
PRP8YHR165C MMS21P38632 267 aa2.79□□□□□ -1.96
PRP8YHR165C RGI1P40043 161 aaPredicted RBP2.79□□□□□ -1.96
PRP8YHR165C COG3P40094 801 aa2.79□□□□□ -1.96
PRP8YHR165C COS6P53344 381 aa2.79□□□□□ -1.96
PRP8YHR165C MPS1P54199 764 aa2.79□□□□□ -1.96
PRP8YHR165C PRP42Q03776 544 aaKnown RBP2.79□□□□□ -1.96
PRP8YHR165C YMR166CQ03829 368 aa2.79□□□□□ -1.96
PRP8YHR165C SSQ1Q05931 657 aaPredicted RBP2.79□□□□□ -1.96
PRP8YHR165C YLR053CQ12026 108 aa2.79□□□□□ -1.96
PRP8YHR165C ACF2Q12168 779 aa2.79□□□□□ -1.96
PRP8YHR165C PYC1P11154 1178 aaKnown RBP2.78□□□□□ -1.96
PRP8YHR165C PMA2P19657 947 aa2.78□□□□□ -1.96
PRP8YHR165C VPS17P32913 551 aa2.78□□□□□ -1.96
PRP8YHR165C TFA2P36145 328 aa2.78□□□□□ -1.96
PRP8YHR165C MEF2P39677 819 aa2.78□□□□□ -1.96
PRP8YHR165C SAW1P39735 261 aa2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms