RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeast

Gene SDH6, Length 240 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDH6	YDR379C-A	THI4	P32318	326 aa		0.9	□□□□□ -2.27
SDH6	YDR379C-A	SIP1	P32578	815 aa		0.9	□□□□□ -2.27
SDH6	YDR379C-A	OAF3	P36023	863 aa		0.9	□□□□□ -2.27
SDH6	YDR379C-A	ERC1	P38767	581 aa		0.9	□□□□□ -2.27
SDH6	YDR379C-A	MGS1	P40151	587 aa		0.9	□□□□□ -2.27
SDH6	YDR379C-A	RTS2	P40962	232 aa		0.9	□□□□□ -2.27
SDH6	YDR379C-A	IDS2	P46958	469 aa		0.9	□□□□□ -2.27
SDH6	YDR379C-A	NOP7	P53261	605 aa	Known RBP	0.9	□□□□□ -2.27
SDH6	YDR379C-A	POB3	Q04636	552 aa	Known RBP	0.9	□□□□□ -2.27
SDH6	YDR379C-A	NTG2	Q08214	380 aa		0.9	□□□□□ -2.27
SDH6	YDR379C-A	YOL098C	Q12496	1037 aa		0.9	□□□□□ -2.27
SDH6	YDR379C-A	APM4	Q99186	491 aa		0.9	□□□□□ -2.27
SDH6	YDR379C-A	RPL15A	P05748	204 aa	Known RBP	0.89	□□□□□ -2.27
SDH6	YDR379C-A	YKL091C	P33324	310 aa	Known RBP	0.89	□□□□□ -2.27
SDH6	YDR379C-A	CKB2	P38930	258 aa		0.89	□□□□□ -2.27
SDH6	YDR379C-A	HXT6	P39003	570 aa	Known RBP	0.89	□□□□□ -2.27
SDH6	YDR379C-A	HXT7	P39004	570 aa		0.89	□□□□□ -2.27
SDH6	YDR379C-A	YNL193W	P53870	558 aa		0.89	□□□□□ -2.27
SDH6	YDR379C-A	YOL159C	Q08300	171 aa		0.89	□□□□□ -2.27
SDH6	YDR379C-A	HFI1	Q12060	488 aa		0.89	□□□□□ -2.27
SDH6	YDR379C-A	CTT1	P06115	562 aa		0.88	□□□□□ -2.27
SDH6	YDR379C-A	CWH43	P25618	953 aa		0.88	□□□□□ -2.27
SDH6	YDR379C-A	FET5	P43561	622 aa		0.88	□□□□□ -2.27
SDH6	YDR379C-A	UBX6	P47049	396 aa		0.88	□□□□□ -2.27
SDH6	YDR379C-A	YJR096W	P47137	282 aa		0.88	□□□□□ -2.27
SDH6	YDR379C-A	YGR153W	P48238	217 aa		0.88	□□□□□ -2.27
SDH6	YDR379C-A	HLJ1	P48353	224 aa		0.88	□□□□□ -2.27
SDH6	YDR379C-A	COS10	P52924	374 aa		0.88	□□□□□ -2.27
SDH6	YDR379C-A	DNM1	P54861	757 aa		0.88	□□□□□ -2.27
SDH6	YDR379C-A	ECM9	Q02202	377 aa		0.88	□□□□□ -2.27
SDH6	YDR379C-A	YHM2	Q04013	314 aa		0.88	□□□□□ -2.27
SDH6	YDR379C-A	ARG1	P22768	420 aa		0.87	□□□□□ -2.27
SDH6	YDR379C-A	AGP2	P38090	596 aa		0.87	□□□□□ -2.27
SDH6	YDR379C-A	SEC31	P38968	1273 aa	Known RBP	0.87	□□□□□ -2.27
SDH6	YDR379C-A	RPH1	P39956	796 aa		0.87	□□□□□ -2.27
SDH6	YDR379C-A	GZF3	P42944	551 aa	Known RBP	0.87	□□□□□ -2.27
SDH6	YDR379C-A	PTA1	Q01329	785 aa	Predicted RBP	0.87	□□□□□ -2.27
SDH6	YDR379C-A	TFB2	Q02939	513 aa		0.87	□□□□□ -2.27
SDH6	YDR379C-A	CTL1	Q03220	320 aa	Known RBP	0.87	□□□□□ -2.27
SDH6	YDR379C-A	RPS21A	P0C0V8	87 aa	Known RBP	0.86	□□□□□ -2.27
SDH6	YDR379C-A	PRP45	P28004	379 aa	Predicted RBP	0.86	□□□□□ -2.27
SDH6	YDR379C-A	ATS1	P31386	333 aa		0.86	□□□□□ -2.27
SDH6	YDR379C-A	PRP19	P32523	503 aa	Known RBP	0.86	□□□□□ -2.27
SDH6	YDR379C-A	DID4	P36108	232 aa		0.86	□□□□□ -2.27
SDH6	YDR379C-A	YFR016C	P43597	1233 aa	Known RBP	0.86	□□□□□ -2.27
SDH6	YDR379C-A	NPA3	P47122	385 aa		0.86	□□□□□ -2.27
SDH6	YDR379C-A	YRB30	P53107	440 aa	Predicted RBP	0.86	□□□□□ -2.27
SDH6	YDR379C-A	SDA1	P53313	767 aa	Known RBP	0.86	□□□□□ -2.27
SDH6	YDR379C-A	SET6	Q12529	373 aa		0.86	□□□□□ -2.27
SDH6	YDR379C-A	VPS5	Q92331	675 aa		0.86	□□□□□ -2.27
SDH6	YDR379C-A	LAC1	P28496	418 aa		0.85	□□□□□ -2.27
SDH6	YDR379C-A	HXT4	P32467	576 aa		0.85	□□□□□ -2.27
SDH6	YDR379C-A	SRP68	P38687	599 aa	Known RBP	0.85	□□□□□ -2.27
SDH6	YDR379C-A	OSW7	P43611	510 aa		0.85	□□□□□ -2.27
SDH6	YDR379C-A	MNN11	P46985	422 aa	Known RBP	0.85	□□□□□ -2.27
SDH6	YDR379C-A	BTN2	P53286	410 aa		0.85	□□□□□ -2.27
SDH6	YDR379C-A	HCR1	Q05775	265 aa	Known RBP	0.85	□□□□□ -2.27
SDH6	YDR379C-A	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	0.85	□□□□□ -2.27	not detected
SDH6	YDR379C-A	MRP2	P10663	115 aa	Predicted RBP	0.84	□□□□□ -2.27
SDH6	YDR379C-A	RPL8A	P17076	256 aa	Known RBP	0.84	□□□□□ -2.27
SDH6	YDR379C-A	OCA5	P38738	679 aa		0.84	□□□□□ -2.27
SDH6	YDR379C-A	IRC5	P43610	853 aa		0.84	□□□□□ -2.27
SDH6	YDR379C-A	RNR4	P49723	345 aa	Known RBP	0.84	□□□□□ -2.27
SDH6	YDR379C-A	MNT2	P53059	558 aa		0.84	□□□□□ -2.27
SDH6	YDR379C-A	SGF73	P53165	657 aa		0.84	□□□□□ -2.27
SDH6	YDR379C-A	ATG21	Q02887	496 aa		0.84	□□□□□ -2.27
SDH6	YDR379C-A	MTQ2	Q03920	221 aa	Predicted RBP	0.84	□□□□□ -2.27
SDH6	YDR379C-A	CRF1	Q04930	467 aa		0.84	□□□□□ -2.27
SDH6	YDR379C-A	NGL1	Q08213	363 aa	Known RBP	0.84	□□□□□ -2.27
SDH6	YDR379C-A	YTM1	Q12024	460 aa	Predicted RBP	0.84	□□□□□ -2.27
SDH6	YDR379C-A	YLR049C	Q12110	428 aa		0.84	□□□□□ -2.27
SDH6	YDR379C-A	ERG1	P32476	496 aa	Known RBP	0.83	□□□□□ -2.28
SDH6	YDR379C-A	MIC60	P36112	540 aa		0.83	□□□□□ -2.28
SDH6	YDR379C-A	TYS1	P36421	394 aa	Known RBP	0.83	□□□□□ -2.28
SDH6	YDR379C-A	IDP2	P41939	412 aa		0.83	□□□□□ -2.28
SDH6	YDR379C-A	ASI1	P54074	624 aa		0.83	□□□□□ -2.28
SDH6	YDR379C-A	ARP10	Q04549	284 aa		0.83	□□□□□ -2.28
SDH6	YDR379C-A	TMA64	Q04600	565 aa	Known RBP	0.83	□□□□□ -2.28
SDH6	YDR379C-A	NOP14	Q99207	810 aa	Known RBP	0.83	□□□□□ -2.28
SDH6	YDR379C-A	URA3	P03962	267 aa		0.82	□□□□□ -2.28
SDH6	YDR379C-A	ATP12	P22135	325 aa		0.82	□□□□□ -2.28
SDH6	YDR379C-A	PRE2	P30656	287 aa	Known RBP	0.82	□□□□□ -2.28
SDH6	YDR379C-A	PET309	P32522	965 aa	Predicted RBP	0.82	□□□□□ -2.28
SDH6	YDR379C-A	YEN1	P40028	759 aa		0.82	□□□□□ -2.28
SDH6	YDR379C-A	PEA2	P40091	420 aa		0.82	□□□□□ -2.28
SDH6	YDR379C-A	IKS1	P47042	667 aa		0.82	□□□□□ -2.28
SDH6	YDR379C-A	YLR455W	Q06188	304 aa		0.82	□□□□□ -2.28
SDH6	YDR379C-A	THI73	Q07904	523 aa		0.82	□□□□□ -2.28
SDH6	YDR379C-A	YOR378W	Q08902	515 aa		0.82	□□□□□ -2.28
SDH6	YDR379C-A	HOS1	Q12214	470 aa		0.82	□□□□□ -2.28
SDH6	YDR379C-A	YBR255C-A	Q3E776	120 aa		0.82	□□□□□ -2.28
SDH6	YDR379C-A	EDE1	P34216	1381 aa		0.82	□□□□□ -2.28
SDH6	YDR379C-A	SUI3	P09064	285 aa	Known RBP	0.81	□□□□□ -2.28
SDH6	YDR379C-A	PDE1	P22434	369 aa		0.81	□□□□□ -2.28
SDH6	YDR379C-A	SER1	P33330	395 aa	Known RBP	0.81	□□□□□ -2.28
SDH6	YDR379C-A	SSP120	P39931	234 aa	Known RBP	0.81	□□□□□ -2.28
SDH6	YDR379C-A	RPR2	P40571	144 aa		0.81	□□□□□ -2.28
SDH6	YDR379C-A	MAD2	P40958	196 aa		0.81	□□□□□ -2.28
SDH6	YDR379C-A	GUF1	P46943	645 aa		0.81	□□□□□ -2.28
SDH6	YDR379C-A	RTT101	P47050	842 aa		0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms