RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCM1	YCR065W	TLG2	Q08144	397 aa		4.27	□□□□□ -1.73
HCM1	YCR065W	ABP140	Q08641	628 aa	Known RBP	4.27	□□□□□ -1.73
HCM1	YCR065W	PSY3	Q12318	242 aa		4.27	□□□□□ -1.73
HCM1	YCR065W	LAG2	Q92325	660 aa		4.27	□□□□□ -1.73
HCM1	YCR065W	SRN2	Q99176	213 aa		4.27	□□□□□ -1.73
HCM1	YCR065W	LAM4	P38800	1345 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	RPP2A	P05319	106 aa	Known RBP	4.26	□□□□□ -1.73
HCM1	YCR065W	TUB3	P09734	445 aa	Known RBP	4.26	□□□□□ -1.73
HCM1	YCR065W	MSS116	P15424	664 aa	Known RBP	4.26	□□□□□ -1.73
HCM1	YCR065W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
HCM1	YCR065W	YKU70	P32807	602 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	YBR225W	P38321	900 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	MSS4	P38994	779 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	RIP-Chip
HCM1	YCR065W	GIP4	P39732	760 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	YJR039W	P47107	1121 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	TAF4	P50105	388 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	EXG2	P52911	562 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	PAN2	P53010	1115 aa	Predicted RBP	4.26	□□□□□ -1.73
HCM1	YCR065W	ARE2	P53629	642 aa	Known RBP	4.26	□□□□□ -1.73
HCM1	YCR065W	OAZ1	Q02803	292 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	SPC2	Q04969	178 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	THI21	Q08975	551 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	VIK1	Q12045	647 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	VPS54	Q12071	889 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	RBD2	Q12270	262 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	SPT6	P23615	1451 aa	Known RBP	4.26	□□□□□ -1.73
HCM1	YCR065W	SRD1	P09007	221 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	SEC18	P18759	758 aa	Known RBP	4.26	□□□□□ -1.73
HCM1	YCR065W	PRP4	P20053	465 aa	Known RBP	4.26	□□□□□ -1.73
HCM1	YCR065W	MRPL8	P22353	238 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	RPI1	P23250	407 aa	Known RBP	4.26	□□□□□ -1.73
HCM1	YCR065W	KAR4	P25583	335 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	CDC15	P27636	974 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	BMH1	P29311	267 aa	Known RBP	4.26	□□□□□ -1.73
HCM1	YCR065W	RPT5	P33297	434 aa	Known RBP	4.26	□□□□□ -1.73
HCM1	YCR065W	YPT52	P36018	234 aa	Known RBP	4.26	□□□□□ -1.73
HCM1	YCR065W	POP7	P38291	140 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	NTC20	P38302	140 aa	Predicted RBP	4.26	□□□□□ -1.73
HCM1	YCR065W	COS111	P38308	924 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	KEL1	P38853	1164 aa	Known RBP	4.26	□□□□□ -1.73
HCM1	YCR065W	YTA12	P40341	825 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	ATF1	P40353	525 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	UBP7	P40453	1071 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	DPH1	P40487	425 aa	Known RBP	4.26	□□□□□ -1.73
HCM1	YCR065W	BNA6	P43619	295 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	SNX4	P47057	423 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	YDL183C	P48569	320 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	ZIP2	P53061	704 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	DIP5	P53388	608 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	MNT4	P53745	580 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	YNL146W	P53906	100 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	KTR6	P54070	446 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	GTB1	Q04924	702 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	RSF1	Q05043	376 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	SPH1	Q06160	661 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	DSE3	Q08729	430 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	CMC2	Q3E7A4	109 aa		4.26	□□□□□ -1.73
HCM1	YCR065W	HSL1	P34244	1518 aa		4.25	□□□□□ -1.73
HCM1	YCR065W	TDH1	P00360	332 aa	Known RBP	4.25	□□□□□ -1.73
HCM1	YCR065W	MET17	P06106	444 aa		4.25	□□□□□ -1.73
HCM1	YCR065W	PRB1	P09232	635 aa		4.25	□□□□□ -1.73
HCM1	YCR065W	CWH43	P25618	953 aa		4.25	□□□□□ -1.73
HCM1	YCR065W	EFT1	P32324	842 aa	Known RBP	4.25	□□□□□ -1.73
HCM1	YCR065W	HEM12	P32347	362 aa	Predicted RBP	4.25	□□□□□ -1.73
HCM1	YCR065W	RMA1	P36001	430 aa	Known RBP	4.25	□□□□□ -1.73
HCM1	YCR065W	SHM2	P37291	469 aa	Known RBP	4.25	□□□□□ -1.73
HCM1	YCR065W	YHR078W	P38799	552 aa		4.25	□□□□□ -1.73
HCM1	YCR065W	SET5	P38890	526 aa	Known RBP	4.25	□□□□□ -1.73
HCM1	YCR065W	YDR089W	P38966	869 aa		4.25	□□□□□ -1.73
HCM1	YCR065W	NPR2	P39923	615 aa		4.25	□□□□□ -1.73
HCM1	YCR065W	MRX1	P40050	688 aa		4.25	□□□□□ -1.73
HCM1	YCR065W	FET5	P43561	622 aa		4.25	□□□□□ -1.73
HCM1	YCR065W	GCD14	P46959	383 aa	Predicted RBP	4.25	□□□□□ -1.73
HCM1	YCR065W	ALY2	P47029	1046 aa		4.25	□□□□□ -1.73
HCM1	YCR065W	MNN10	P50108	393 aa	Known RBP	4.25	□□□□□ -1.73
HCM1	YCR065W	PHO23	P50947	330 aa		4.25	□□□□□ -1.73
HCM1	YCR065W	MNT2	P53059	558 aa		4.25	□□□□□ -1.73
HCM1	YCR065W	IST1	P53843	298 aa	Predicted RBP	4.25	□□□□□ -1.73
HCM1	YCR065W	ESBP6	P53918	673 aa		4.25	□□□□□ -1.73
HCM1	YCR065W	EGD1	Q02642	157 aa	Known RBP	4.25	□□□□□ -1.73
HCM1	YCR065W	URC2	Q04411	772 aa		4.25	□□□□□ -1.73
HCM1	YCR065W	MFB1	Q04922	465 aa		4.25	□□□□□ -1.73
HCM1	YCR065W	DNL4	Q08387	944 aa	Predicted RBP	4.25	□□□□□ -1.73
HCM1	YCR065W	FMP40	Q08968	688 aa	Predicted RBP	4.25	□□□□□ -1.73
HCM1	YCR065W	YTM1	Q12024	460 aa	Predicted RBP	4.25	□□□□□ -1.73
HCM1	YCR065W	LSO2	Q3E772	92 aa	Known RBP	4.25	□□□□□ -1.73
HCM1	YCR065W	YRF1-4	O13559	1382 aa		4.24	□□□□□ -1.73
HCM1	YCR065W	YML133C	Q03099	1374 aa		4.24	□□□□□ -1.73
HCM1	YCR065W	YLL067C	Q07888	1374 aa		4.24	□□□□□ -1.73
HCM1	YCR065W	YLL066C	Q99208	1374 aa		4.24	□□□□□ -1.73
HCM1	YCR065W	SWI1	P09547	1314 aa		4.24	□□□□□ -1.73
HCM1	YCR065W	RPS9B	P05755	195 aa	Known RBP	4.24	□□□□□ -1.73
HCM1	YCR065W	ARG80	P07249	177 aa		4.24	□□□□□ -1.73
HCM1	YCR065W	RAD18	P10862	487 aa		4.24	□□□□□ -1.73
HCM1	YCR065W	YPK2	P18961	677 aa		4.24	□□□□□ -1.73
HCM1	YCR065W	ADK2	P26364	225 aa		4.24	□□□□□ -1.73
HCM1	YCR065W	NGG1	P32494	702 aa		4.24	□□□□□ -1.73
HCM1	YCR065W	UTP9	P38882	575 aa	Known RBP	4.24	□□□□□ -1.73
HCM1	YCR065W	SEC31	P38968	1273 aa	Known RBP	4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms