RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 TSPY2A6NKD2 308 aa19.59■□□□□ 0.73
PHGDH-211ENST00000641213 IKBKBO14920 756 aa19.59■□□□□ 0.73
PHGDH-211ENST00000641213 GYS1P13807 737 aa19.59■□□□□ 0.73
PHGDH-211ENST00000641213 GPSM2P81274 684 aa19.59■□□□□ 0.73
PHGDH-211ENST00000641213 MDM2Q00987 491 aaPredicted RBP19.59■□□□□ 0.73
PHGDH-211ENST00000641213 SLC4A8Q2Y0W8 1093 aa19.59■□□□□ 0.73
PHGDH-211ENST00000641213 CRY2Q49AN0 593 aa19.59■□□□□ 0.73
PHGDH-211ENST00000641213 EARS2Q5JPH6 523 aaKnown RBP19.59■□□□□ 0.73
PHGDH-211ENST00000641213 RCSD1Q6JBY9 416 aa19.59■□□□□ 0.73
PHGDH-211ENST00000641213 FOXP4Q8IVH2 680 aaPredicted RBP19.59■□□□□ 0.73
PHGDH-211ENST00000641213 SH3RF3Q8TEJ3 882 aaPredicted RBP19.59■□□□□ 0.73
PHGDH-211ENST00000641213 USP5P45974 858 aa19.58■□□□□ 0.73
PHGDH-211ENST00000641213 GSTO1P78417 241 aa19.58■□□□□ 0.73
PHGDH-211ENST00000641213 DIXDC1Q155Q3 683 aa19.58■□□□□ 0.73
PHGDH-211ENST00000641213 PRIMPOLQ96LW4 560 aa19.58■□□□□ 0.73
PHGDH-211ENST00000641213 BRWD3Q6RI45 1802 aa19.58■□□□□ 0.72
PHGDH-211ENST00000641213 TPM4P67936 248 aa19.58■□□□□ 0.72
PHGDH-211ENST00000641213 ARID5BQ14865 1188 aa19.58■□□□□ 0.72
PHGDH-211ENST00000641213 NPY5RQ15761 445 aa19.58■□□□□ 0.72
PHGDH-211ENST00000641213 TRPC5Q9UL62 973 aaPredicted RBP19.58■□□□□ 0.72
PHGDH-211ENST00000641213 PCDHA5Q9Y5H7 936 aa19.58■□□□□ 0.72
PHGDH-211ENST00000641213 MORC2Q9Y6X9 1032 aaPredicted RBP19.58■□□□□ 0.72
PHGDH-211ENST00000641213 TRIM75PA6NK02 468 aa19.57■□□□□ 0.72
PHGDH-211ENST00000641213 FOXN1O15353 648 aa19.57■□□□□ 0.72
PHGDH-211ENST00000641213 NEMFO60524 1076 aa19.57■□□□□ 0.72
PHGDH-211ENST00000641213 SERPINB2P05120 415 aa19.57■□□□□ 0.72
PHGDH-211ENST00000641213 ROBO3Q96MS0 1386 aa19.57■□□□□ 0.72
PHGDH-211ENST00000641213 POLR2DO15514 142 aaKnown RBP19.56■□□□□ 0.72
PHGDH-211ENST00000641213 PPP4CP60510 307 aa19.56■□□□□ 0.72
PHGDH-211ENST00000641213 ST5P78524 1137 aa19.56■□□□□ 0.72
PHGDH-211ENST00000641213 FILIP1Q7Z7B0 1213 aa19.56■□□□□ 0.72
PHGDH-211ENST00000641213 MYRIPQ8NFW9 859 aa19.56■□□□□ 0.72
PHGDH-211ENST00000641213 TNFRSF25Q93038 417 aa19.56■□□□□ 0.72
PHGDH-211ENST00000641213 XPO4Q9C0E2 1151 aaKnown RBP19.56■□□□□ 0.72
PHGDH-211ENST00000641213 CSRNP2Q9H175 543 aa19.56■□□□□ 0.72
PHGDH-211ENST00000641213 HSD3B7Q9H2F3 369 aa19.56■□□□□ 0.72
PHGDH-211ENST00000641213 MYH1P12882 1939 aa19.56■□□□□ 0.72
PHGDH-211ENST00000641213 BAG3O95817 575 aa19.56■□□□□ 0.72
PHGDH-211ENST00000641213 TFAP4Q01664 338 aa19.56■□□□□ 0.72
PHGDH-211ENST00000641213 DYNLL2Q96FJ2 89 aa19.56■□□□□ 0.72
PHGDH-211ENST00000641213 BRMS1Q9HCU9 246 aa19.56■□□□□ 0.72
PHGDH-211ENST00000641213 IL17RBQ9NRM6 502 aa19.56■□□□□ 0.72
PHGDH-211ENST00000641213 IFNKQ9P0W0 207 aa19.56■□□□□ 0.72
PHGDH-211ENST00000641213 SERTAD1Q9UHV2 236 aa19.56■□□□□ 0.72
PHGDH-211ENST00000641213 HOOK1Q9UJC3 728 aaKnown RBP19.56■□□□□ 0.72
PHGDH-211ENST00000641213 UFL1O94874 794 aa19.55■□□□□ 0.72
PHGDH-211ENST00000641213 RBM17Q96I25 401 aaKnown RBP19.55■□□□□ 0.72
PHGDH-211ENST00000641213 DDX60LQ5H9U9 1706 aaKnown RBP19.55■□□□□ 0.72
PHGDH-211ENST00000641213 DYNC1I1O14576 645 aa19.55■□□□□ 0.72
PHGDH-211ENST00000641213 SMC2O95347 1197 aa19.55■□□□□ 0.72
PHGDH-211ENST00000641213 LDHCP07864 332 aa19.55■□□□□ 0.72
PHGDH-211ENST00000641213 SCG2P13521 617 aa19.55■□□□□ 0.72
PHGDH-211ENST00000641213 LMOD1P29536 600 aaPredicted RBP19.55■□□□□ 0.72
PHGDH-211ENST00000641213 NT5C2P49902 561 aa19.55■□□□□ 0.72
PHGDH-211ENST00000641213 POSTNQ15063 836 aa19.55■□□□□ 0.72
PHGDH-211ENST00000641213 NOM1Q5C9Z4 860 aaKnown RBP19.55■□□□□ 0.72
PHGDH-211ENST00000641213 USP49Q70CQ1 688 aa19.55■□□□□ 0.72
PHGDH-211ENST00000641213 TGFBRAP1Q8WUH2 860 aa19.55■□□□□ 0.72
PHGDH-211ENST00000641213 NOL10Q9BSC4 688 aaKnown RBP19.55■□□□□ 0.72
PHGDH-211ENST00000641213 CD209Q9NNX6 404 aa19.55■□□□□ 0.72
PHGDH-211ENST00000641213 FOCADQ5VW36 1801 aa19.54■□□□□ 0.72
PHGDH-211ENST00000641213 WNT7AO00755 349 aa19.54■□□□□ 0.72
PHGDH-211ENST00000641213 BMP6P22004 513 aa19.54■□□□□ 0.72
PHGDH-211ENST00000641213 ATP2B4P23634 1241 aa19.54■□□□□ 0.72
PHGDH-211ENST00000641213 OLFM4Q6UX06 510 aa19.54■□□□□ 0.72
PHGDH-211ENST00000641213 DGKHQ86XP1 1220 aa19.54■□□□□ 0.72
PHGDH-211ENST00000641213 OSBPL5Q9H0X9 879 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-211ENST00000641213 KAT14Q9H8E8 782 aa19.54■□□□□ 0.72
PHGDH-211ENST00000641213 IMPACTQ9P2X3 320 aa19.54■□□□□ 0.72
PHGDH-211ENST00000641213 LRRC37AA6NMS7 1700 aa19.54■□□□□ 0.72
PHGDH-211ENST00000641213 LTBP1Q14766 1721 aa19.54■□□□□ 0.72
PHGDH-211ENST00000641213 ACTN4O43707 911 aaKnown RBP19.53■□□□□ 0.72
PHGDH-211ENST00000641213 IL1R1P14778 569 aa19.53■□□□□ 0.72
PHGDH-211ENST00000641213 KIF5BP33176 963 aa19.53■□□□□ 0.72
PHGDH-211ENST00000641213 MYL5Q02045 173 aa19.53■□□□□ 0.72
PHGDH-211ENST00000641213 PFKFB3Q16875 520 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-211ENST00000641213 NT5DC1Q5TFE4 455 aa19.53■□□□□ 0.72
PHGDH-211ENST00000641213 ANKS1AQ92625 1134 aa19.53■□□□□ 0.72
PHGDH-211ENST00000641213 RTFDC1Q9BY42 306 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-211ENST00000641213 GGA1Q9UJY5 639 aa19.53■□□□□ 0.72
PHGDH-211ENST00000641213 PRR29P0C7W0 189 aa19.53■□□□□ 0.72
PHGDH-211ENST00000641213 GSDMDP57764 484 aa19.53■□□□□ 0.72
PHGDH-211ENST00000641213 CCZ1BP86790 482 aa19.53■□□□□ 0.72
PHGDH-211ENST00000641213 CCZ1P86791 482 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-211ENST00000641213 FANCCQ00597 558 aa19.53■□□□□ 0.72
PHGDH-211ENST00000641213 SLC27A3Q5K4L6 730 aa19.53■□□□□ 0.72
PHGDH-211ENST00000641213 AMOTL1Q8IY63 956 aa19.53■□□□□ 0.72
PHGDH-211ENST00000641213 PDILTQ8N807 584 aa19.53■□□□□ 0.72
PHGDH-211ENST00000641213 MKNK2Q9HBH9 465 aa19.53■□□□□ 0.72
PHGDH-211ENST00000641213 BMP15O95972 392 aa19.52■□□□□ 0.72
PHGDH-211ENST00000641213 SKILP12757 684 aa19.52■□□□□ 0.72
PHGDH-211ENST00000641213 ATP1A3P13637 1013 aa19.52■□□□□ 0.72
PHGDH-211ENST00000641213 VEGFAP15692 232 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-211ENST00000641213 HSPA1LP34931 641 aa19.52■□□□□ 0.72
PHGDH-211ENST00000641213 PNMA1Q8ND90 353 aa19.52■□□□□ 0.72
PHGDH-211ENST00000641213 MAN1B1Q9UKM7 699 aa19.52■□□□□ 0.72
PHGDH-211ENST00000641213 EP400Q96L91 3159 aa19.52■□□□□ 0.72
PHGDH-211ENST00000641213 ANKRD31Q8N7Z5 1873 aa19.52■□□□□ 0.71
PHGDH-211ENST00000641213 BBOX1O75936 387 aa19.52■□□□□ 0.71
PHGDH-211ENST00000641213 SARSP49591 514 aaKnown RBP19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms