RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	OTUD7B	Q6GQQ9	843 aa		12.2	□□□□□ -0.46
NECAP1-223	ENST00000640091	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.2	□□□□□ -0.46
NECAP1-223	ENST00000640091	TMEM47	Q9BQJ4	181 aa		12.2	□□□□□ -0.46
NECAP1-223	ENST00000640091	EHD4	Q9H223	541 aa		12.2	□□□□□ -0.46
NECAP1-223	ENST00000640091	FOCAD	Q5VW36	1801 aa		12.2	□□□□□ -0.46
NECAP1-223	ENST00000640091	CNTNAP1	P78357	1384 aa		12.2	□□□□□ -0.46
NECAP1-223	ENST00000640091	GPR162	Q16538	588 aa		12.2	□□□□□ -0.46
NECAP1-223	ENST00000640091	PNMA1	Q8ND90	353 aa		12.2	□□□□□ -0.46
NECAP1-223	ENST00000640091	FAM151A	Q8WW52	585 aa		12.2	□□□□□ -0.46
NECAP1-223	ENST00000640091	AIFM3	Q96NN9	605 aa		12.2	□□□□□ -0.46
NECAP1-223	ENST00000640091	TRIM34	Q9BYJ4	488 aa		12.2	□□□□□ -0.46
NECAP1-223	ENST00000640091		H3BQV1	296 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091		H7C1D1	291 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	F13A1	P00488	732 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	CERKL	Q49MI3	558 aa	Predicted RBP	12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	IFFO2	Q5TF58	517 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	C9orf131	Q5VYM1	1079 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	CPLX2	Q6PUV4	134 aa	Known RBP	12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	MIGA2	Q7L4E1	593 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	GPC2	Q8N158	579 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	GBP4	Q96PP9	640 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	SLC26A6	Q9BXS9	759 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	ECM29	Q5VYK3	1845 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	CCDC196	A0A1B0GTZ2	297 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	PLEKHA8P1	O95397	391 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	EPS15	P42566	896 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	NT5C2	P49902	561 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	MCTP1	Q6DN14	999 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	FAM173B	Q6P4H8	233 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	RASGRP2	Q7LDG7	609 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	ANKS1A	Q92625	1134 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	MTMR4	Q9NYA4	1195 aa		12.19	□□□□□ -0.46
NECAP1-223	ENST00000640091	ATRNL1	Q5VV63	1379 aa		12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	hCG_1642624	A0A1W2PR95	340 aa		12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	CDKL5	O76039	1030 aa		12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	DDAH1	O94760	285 aa		12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	GDF11	O95390	407 aa		12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	IFNAR1	P17181	557 aa		12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	GUCY1A2	P33402	732 aa		12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	SSRP1	Q08945	709 aa	Known RBP	12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	RASA3	Q14644	834 aa		12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	RRP1B	Q14684	758 aa	Known RBP	12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	KIF4B	Q2VIQ3	1234 aa		12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	CCDC178	Q5BJE1	867 aa		12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	TATDN1	Q6P1N9	297 aa		12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	GPRC5D	Q9NZD1	345 aa		12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	CLIP2	Q9UDT6	1046 aa		12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	HACL1	Q9UJ83	578 aa		12.18	□□□□□ -0.46
NECAP1-223	ENST00000640091	CALM1	P0DP23	149 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	CALM2	P0DP24	149 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	CALM3	P0DP25	149 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	RCAN1	P53805	252 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	JAG1	P78504	1218 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	ATP2B2	Q01814	1243 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	FKBP1C	Q5VVH2	108 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	CLEC17A	Q6ZS10	378 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	NBPF11	Q86T75	865 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	STAG2	Q8N3U4	1231 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	CTCFL	Q8NI51	663 aa	Predicted RBP	12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	TRPM4	Q8TD43	1214 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	KIF3A	Q9Y496	699 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	GOLGA8H	P0CJ92	632 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	MMP14	P50281	582 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	FAM83A	Q86UY5	434 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	METTL16	Q86W50	562 aa	Known RBP	12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	LRRC47	Q8N1G4	583 aa	Known RBP	12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	SRBD1	Q8N5C6	995 aa	Known RBP	12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	PIBF1	Q8WXW3	757 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	C8orf76	Q96K31	380 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	ALG1	Q9BT22	464 aa		12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091		V9GY48	417 aa	Predicted RBP	12.17	□□□□□ -0.46
NECAP1-223	ENST00000640091	NID2	Q14112	1375 aa		12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	IGKV6D-41	A0A0C4DH26	115 aa		12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	FMNL1	O95466	1100 aa	Predicted RBP	12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	TOP1	P11387	765 aa	Known RBP	12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	HIRA	P54198	1017 aa	Predicted RBP	12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	PPP2R5B	Q15173	497 aa		12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	CCDC17	Q96LX7	622 aa		12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	GDPD2	Q9HCC8	539 aa		12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	PGAP2	Q9UHJ9	254 aa		12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	TTLL1	O95922	423 aa		12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	NOV	P48745	357 aa		12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	FUT2	Q10981	343 aa		12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	SEPT2	Q15019	361 aa		12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	ABCB5	Q2M3G0	1257 aa		12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	ANGEL2	Q5VTE6	544 aa	Known RBP	12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	PRAMEF18	Q5VWM3	479 aa		12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	USP17L2	Q6R6M4	530 aa		12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	TRIM22	Q8IYM9	498 aa		12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	DEFB129	Q9H1M3	183 aa		12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	RBM28	Q9NW13	759 aa	Known RBP	12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	MAD2L2	Q9UI95	211 aa		12.16	□□□□□ -0.46
NECAP1-223	ENST00000640091	PRPF40A	O75400	957 aa	Known RBP	12.15	□□□□□ -0.46
NECAP1-223	ENST00000640091	GH2	P01242	217 aa		12.15	□□□□□ -0.46
NECAP1-223	ENST00000640091	PDIA4	P13667	645 aa	Known RBP	12.15	□□□□□ -0.46
NECAP1-223	ENST00000640091	TNNI2	P48788	182 aa		12.15	□□□□□ -0.46
NECAP1-223	ENST00000640091	DNM1	Q05193	864 aa	Known RBP	12.15	□□□□□ -0.46
NECAP1-223	ENST00000640091	TMTC3	Q6ZXV5	915 aa		12.15	□□□□□ -0.46
NECAP1-223	ENST00000640091	FBXO18	Q8NFZ0	1043 aa		12.15	□□□□□ -0.46

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