RNA–Protein interactions for RNA: ENST00000639809.1

SPIN3-229, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,118 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-229ENST00000639809 CERKLQ49MI3 558 aaPredicted RBP19.21■□□□□ 0.67
SPIN3-229ENST00000639809 CEP85Q6P2H3 762 aa19.21■□□□□ 0.67
SPIN3-229ENST00000639809 C7orf61Q8IZ16 206 aa19.21■□□□□ 0.67
SPIN3-229ENST00000639809 MIGA1Q8NAN2 632 aa19.21■□□□□ 0.67
SPIN3-229ENST00000639809 PAGR1Q9BTK6 254 aa19.21■□□□□ 0.67
SPIN3-229ENST00000639809 CWC22Q9HCG8 908 aaKnown RBP19.21■□□□□ 0.67
SPIN3-229ENST00000639809 MYH1P12882 1939 aa19.2■□□□□ 0.66
SPIN3-229ENST00000639809 CACNB2Q08289 660 aaPredicted RBP19.2■□□□□ 0.66
SPIN3-229ENST00000639809 ABCB5Q2M3G0 1257 aa19.2■□□□□ 0.66
SPIN3-229ENST00000639809 SHROOM1Q2M3G4 852 aaPredicted RBP19.2■□□□□ 0.66
SPIN3-229ENST00000639809 CATSPERGQ6ZRH7 1159 aa19.2■□□□□ 0.66
SPIN3-229ENST00000639809 PORCNQ9H237 461 aa19.2■□□□□ 0.66
SPIN3-229ENST00000639809 MYO5AQ9Y4I1 1855 aaKnown RBP19.2■□□□□ 0.66
SPIN3-229ENST00000639809 RLBP1P12271 317 aa19.19■□□□□ 0.66
SPIN3-229ENST00000639809 MAP2K5Q13163 448 aa19.19■□□□□ 0.66
SPIN3-229ENST00000639809 AACSQ86V21 672 aa19.19■□□□□ 0.66
SPIN3-229ENST00000639809 ALPK3Q96L96 1907 aa19.19■□□□□ 0.66
SPIN3-229ENST00000639809 DDX60LQ5H9U9 1706 aaKnown RBP19.18■□□□□ 0.66
SPIN3-229ENST00000639809 SLC15A5A6NIM6 579 aa19.18■□□□□ 0.66
SPIN3-229ENST00000639809 MS4A1P11836 297 aa19.18■□□□□ 0.66
SPIN3-229ENST00000639809 VCAM1P19320 739 aa19.18■□□□□ 0.66
SPIN3-229ENST00000639809 RAB3GAP1Q15042 981 aa19.18■□□□□ 0.66
SPIN3-229ENST00000639809 MFSD14CQ5VZR4 134 aa19.18■□□□□ 0.66
SPIN3-229ENST00000639809 EDC3Q96F86 508 aaKnown RBP19.18■□□□□ 0.66
SPIN3-229ENST00000639809 RIOK1Q9BRS2 568 aaKnown RBP19.18■□□□□ 0.66
SPIN3-229ENST00000639809 MSCO60682 206 aa19.17■□□□□ 0.66
SPIN3-229ENST00000639809 COL6A1P12109 1028 aa19.17■□□□□ 0.66
SPIN3-229ENST00000639809 HNRNPUQ00839 825 aaKnown RBP eCLIP19.17■□□□□ 0.66
SPIN3-229ENST00000639809 LHX8Q68G74 356 aa19.17■□□□□ 0.66
SPIN3-229ENST00000639809 POTEEQ6S8J3 1075 aa19.17■□□□□ 0.66
SPIN3-229ENST00000639809 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.17■□□□□ 0.66
SPIN3-229ENST00000639809 CRNKL1Q9BZJ0 848 aaKnown RBP19.17■□□□□ 0.66
SPIN3-229ENST00000639809 ANTXR1Q9H6X2 564 aa19.17■□□□□ 0.66
SPIN3-229ENST00000639809 IVNS1ABPQ9Y6Y0 642 aa19.17■□□□□ 0.66
SPIN3-229ENST00000639809 MAGEB6P1A0A0J9YX57 407 aa19.16■□□□□ 0.66
SPIN3-229ENST00000639809 PEX10O60683 326 aa19.16■□□□□ 0.66
SPIN3-229ENST00000639809 CNMDO75829 334 aa19.16■□□□□ 0.66
SPIN3-229ENST00000639809 POLR3DP05423 398 aaPredicted RBP19.16■□□□□ 0.66
SPIN3-229ENST00000639809 HOXC6P09630 235 aa19.16■□□□□ 0.66
SPIN3-229ENST00000639809 PTPREP23469 700 aa19.16■□□□□ 0.66
SPIN3-229ENST00000639809 GABPAQ06546 454 aa19.16■□□□□ 0.66
SPIN3-229ENST00000639809 ZYXQ15942 572 aaKnown RBP19.16■□□□□ 0.66
SPIN3-229ENST00000639809 LRIT3Q3SXY7 679 aa19.16■□□□□ 0.66
SPIN3-229ENST00000639809 ZMYND8Q9ULU4 1186 aaPredicted RBP19.16■□□□□ 0.66
SPIN3-229ENST00000639809 EXOC6BQ9Y2D4 811 aa19.16■□□□□ 0.66
SPIN3-229ENST00000639809 PFASO15067 1338 aa19.16■□□□□ 0.66
SPIN3-229ENST00000639809 SHMT1P34896 483 aa19.15■□□□□ 0.66
SPIN3-229ENST00000639809 PLCD1P51178 756 aa19.15■□□□□ 0.66
SPIN3-229ENST00000639809 CCL14Q16627 93 aa19.15■□□□□ 0.66
SPIN3-229ENST00000639809 CLASRPQ8N2M8 674 aaKnown RBP19.15■□□□□ 0.66
SPIN3-229ENST00000639809 RHPN1Q8TCX5 695 aa19.15■□□□□ 0.66
SPIN3-229ENST00000639809 HOXC10Q9NYD6 342 aa19.15■□□□□ 0.66
SPIN3-229ENST00000639809 SOX1O00570 391 aaPredicted RBP19.14■□□□□ 0.65
SPIN3-229ENST00000639809 CCND3P30281 292 aaPredicted RBP19.14■□□□□ 0.65
SPIN3-229ENST00000639809 GRB14Q14449 540 aa19.14■□□□□ 0.65
SPIN3-229ENST00000639809 SLC9C2Q5TAH2 1124 aa19.14■□□□□ 0.65
SPIN3-229ENST00000639809 TDHQ8IZJ6 230 aa19.14■□□□□ 0.65
SPIN3-229ENST00000639809 ACER1Q8TDN7 264 aa19.14■□□□□ 0.65
SPIN3-229ENST00000639809 KIF1BPQ96EK5 621 aa19.14■□□□□ 0.65
SPIN3-229ENST00000639809 RPAP3Q9H6T3 665 aaPredicted RBP19.14■□□□□ 0.65
SPIN3-229ENST00000639809 LAMA3Q16787 3333 aa19.14■□□□□ 0.65
SPIN3-229ENST00000639809 SPDYE16A6NNV3 312 aaPredicted RBP19.13■□□□□ 0.65
SPIN3-229ENST00000639809 STRNO43815 780 aa19.13■□□□□ 0.65
SPIN3-229ENST00000639809 HMMRO75330 724 aa19.13■□□□□ 0.65
SPIN3-229ENST00000639809 PDE6AP16499 860 aa19.13■□□□□ 0.65
SPIN3-229ENST00000639809 MAGEA10P43363 369 aaPredicted RBP19.13■□□□□ 0.65
SPIN3-229ENST00000639809 ATP2B2Q01814 1243 aa19.13■□□□□ 0.65
SPIN3-229ENST00000639809 RPAP2Q8IXW5 612 aaPredicted RBP19.13■□□□□ 0.65
SPIN3-229ENST00000639809 MB21D1Q8N884 522 aa19.13■□□□□ 0.65
SPIN3-229ENST00000639809 LRCH3Q96II8 777 aa19.13■□□□□ 0.65
SPIN3-229ENST00000639809 MCM9Q9NXL9 1143 aa19.13■□□□□ 0.65
SPIN3-229ENST00000639809 SWAP70Q9UH65 585 aa19.13■□□□□ 0.65
SPIN3-229ENST00000639809 NDUFB9Q9Y6M9 179 aa19.13■□□□□ 0.65
SPIN3-229ENST00000639809 GUCY1A2P33402 732 aa19.12■□□□□ 0.65
SPIN3-229ENST00000639809 COG2Q14746 738 aa19.12■□□□□ 0.65
SPIN3-229ENST00000639809 WDR78Q5VTH9 848 aa19.12■□□□□ 0.65
SPIN3-229ENST00000639809 TMEM179Q6ZVK1 233 aa19.12■□□□□ 0.65
SPIN3-229ENST00000639809 MIER1Q8N108 512 aa19.12■□□□□ 0.65
SPIN3-229ENST00000639809 SHCBP1Q8NEM2 672 aa19.12■□□□□ 0.65
SPIN3-229ENST00000639809 BTBD7Q9P203 1132 aa19.12■□□□□ 0.65
SPIN3-229ENST00000639809 DDX20Q9UHI6 824 aaKnown RBP19.12■□□□□ 0.65
SPIN3-229ENST00000639809 IFIT2P09913 472 aaKnown RBP19.11■□□□□ 0.65
SPIN3-229ENST00000639809 SYN1P17600 705 aa19.11■□□□□ 0.65
SPIN3-229ENST00000639809 SEPT2Q15019 361 aa19.11■□□□□ 0.65
SPIN3-229ENST00000639809 LPAR1Q92633 364 aa19.11■□□□□ 0.65
SPIN3-229ENST00000639809 UBE2OQ9C0C9 1292 aaKnown RBP19.11■□□□□ 0.65
SPIN3-229ENST00000639809 CHMP4BQ9H444 224 aaKnown RBP19.11■□□□□ 0.65
SPIN3-229ENST00000639809 SH2D4AQ9H788 454 aa19.11■□□□□ 0.65
SPIN3-229ENST00000639809 IL1RAPL2Q9NP60 686 aa19.11■□□□□ 0.65
SPIN3-229ENST00000639809 SLC5A4Q9NY91 659 aa19.11■□□□□ 0.65
SPIN3-229ENST00000639809 ZBED9Q6R2W3 1325 aa19.1■□□□□ 0.65
SPIN3-229ENST00000639809 ZNF532Q9HCE3 1301 aa19.1■□□□□ 0.65
SPIN3-229ENST00000639809 RAB11FIP3O75154 756 aa19.1■□□□□ 0.65
SPIN3-229ENST00000639809 OLFML2BQ68BL8 750 aa19.1■□□□□ 0.65
SPIN3-229ENST00000639809 DCP1AQ9NPI6 582 aaPredicted RBP19.1■□□□□ 0.65
SPIN3-229ENST00000639809 ATP8A2Q9NTI2 1148 aa19.1■□□□□ 0.65
SPIN3-229ENST00000639809 NAV1Q8NEY1 1877 aa19.09■□□□□ 0.65
SPIN3-229ENST00000639809 TCRBV5S4A2TA0A5A2 114 aa19.09■□□□□ 0.65
SPIN3-229ENST00000639809 DNM1LO00429 736 aa19.09■□□□□ 0.65
SPIN3-229ENST00000639809 MPHOSPH10O00566 681 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms