RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 PNOCQ13519 176 aa9.87□□□□□ -0.83
NECAP1-218ENST00000639595 CERS3Q8IU89 383 aa9.87□□□□□ -0.83
NECAP1-218ENST00000639595 VPS54Q9P1Q0 977 aa9.87□□□□□ -0.83
NECAP1-218ENST00000639595 HOOK1Q9UJC3 728 aaKnown RBP9.87□□□□□ -0.83
NECAP1-218ENST00000639595 PCDHA5Q9Y5H7 936 aa9.87□□□□□ -0.83
NECAP1-218ENST00000639595 ECM29Q5VYK3 1845 aa9.87□□□□□ -0.83
NECAP1-218ENST00000639595 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.87□□□□□ -0.83
NECAP1-218ENST00000639595 NPHP1O15259 732 aa9.87□□□□□ -0.83
NECAP1-218ENST00000639595 GSDMDP57764 484 aa9.87□□□□□ -0.83
NECAP1-218ENST00000639595 GRIN1Q05586 938 aa9.87□□□□□ -0.83
NECAP1-218ENST00000639595 KANK3Q6NY19 840 aa9.87□□□□□ -0.83
NECAP1-218ENST00000639595 ZNF804AQ7Z570 1209 aa9.87□□□□□ -0.83
NECAP1-218ENST00000639595 SEPT12Q8IYM1 358 aa9.87□□□□□ -0.83
NECAP1-218ENST00000639595 CTCFLQ8NI51 663 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-218ENST00000639595 KCND1Q9NSA2 647 aa9.87□□□□□ -0.83
NECAP1-218ENST00000639595 TCP11L1Q9NUJ3 509 aa9.87□□□□□ -0.83
NECAP1-218ENST00000639595 MCM9Q9NXL9 1143 aa9.87□□□□□ -0.83
NECAP1-218ENST00000639595 CNTNAP5Q8WYK1 1306 aa9.87□□□□□ -0.83
NECAP1-218ENST00000639595 ROBO3Q96MS0 1386 aa9.87□□□□□ -0.83
NECAP1-218ENST00000639595 NMT2O60551 498 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 BAG3O95817 575 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 LDHCP07864 332 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 GYS1P13807 737 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 HOXA10P31260 410 aaPredicted RBP9.86□□□□□ -0.83
NECAP1-218ENST00000639595 DHX8Q14562 1220 aaKnown RBP9.86□□□□□ -0.83
NECAP1-218ENST00000639595 CCDC178Q5BJE1 867 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 FAM47AQ5JRC9 791 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 SPATA20Q8TB22 786 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 FBXW7Q969H0 707 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 TAF1LQ8IZX4 1826 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 TNRC6CQ9HCJ0 1690 aaKnown RBP9.86□□□□□ -0.83
NECAP1-218ENST00000639595 KLRG2A4D1S0 409 aaPredicted RBP9.86□□□□□ -0.83
NECAP1-218ENST00000639595 BBOX1O75936 387 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 USP17L8P0C7I0 530 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 IL1R1P14778 569 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 BMP6P22004 513 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 MYL5Q02045 173 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 EARS2Q5JPH6 523 aaKnown RBP9.86□□□□□ -0.83
NECAP1-218ENST00000639595 SLC27A3Q5K4L6 730 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 FERMT2Q96AC1 680 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 BRMS1Q9HCU9 246 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 IL17RBQ9NRM6 502 aa9.86□□□□□ -0.83
NECAP1-218ENST00000639595 TRPC5Q9UL62 973 aaPredicted RBP9.86□□□□□ -0.83
NECAP1-218ENST00000639595 TSPY2A6NKD2 308 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 POLR2DO15514 142 aaKnown RBP9.85□□□□□ -0.83
NECAP1-218ENST00000639595 ACTN4O43707 911 aaKnown RBP9.85□□□□□ -0.83
NECAP1-218ENST00000639595 RRP9O43818 475 aaKnown RBP9.85□□□□□ -0.83
NECAP1-218ENST00000639595 SCG2P13521 617 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 ATP2B4P23634 1241 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 KIF5BP33176 963 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 TRAPPC10P48553 1259 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 GPSM2P81274 684 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 POSTNQ15063 836 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 PFKFB3Q16875 520 aaPredicted RBP9.85□□□□□ -0.83
NECAP1-218ENST00000639595 SPECC1Q5M775 1068 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 TRIML1Q8N9V2 468 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 SH3RF3Q8TEJ3 882 aaPredicted RBP9.85□□□□□ -0.83
NECAP1-218ENST00000639595 FAM163AQ96GL9 167 aaPredicted RBP9.85□□□□□ -0.83
NECAP1-218ENST00000639595 XPO4Q9C0E2 1151 aaKnown RBP9.85□□□□□ -0.83
NECAP1-218ENST00000639595 CSRNP2Q9H175 543 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 JAG2Q9Y219 1238 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 AFF2P51816 1311 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 CCZ1BP86790 482 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 CCZ1P86791 482 aaPredicted RBP9.85□□□□□ -0.83
NECAP1-218ENST00000639595 TFAP4Q01664 338 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 ARID5BQ14865 1188 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 GRIK5Q16478 980 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 SLC51AQ86UW1 340 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 RPGRQ92834 1020 aaKnown RBP9.85□□□□□ -0.83
NECAP1-218ENST00000639595 CD209Q9NNX6 404 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 IFNKQ9P0W0 207 aa9.85□□□□□ -0.83
NECAP1-218ENST00000639595 BAZ2AQ9UIF9 1905 aaKnown RBP9.85□□□□□ -0.83
NECAP1-218ENST00000639595 MAST2Q6P0Q8 1798 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 DLEC1Q9Y238 1755 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 GPR75-ASB3A0A0A6YYF3 556 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 hCG_1642624A0A1W2PR95 340 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 FAM205CA6NFA0 338 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 FOXN1O15353 648 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 SERPINB2P05120 415 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 SKILP12757 684 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 USP5P45974 858 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 FANCCQ00597 558 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 CT47A1Q5JQC4 288 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-218ENST00000639595 ISM2Q6H9L7 571 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 OLFM4Q6UX06 510 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 USP49Q70CQ1 688 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 FILIP1Q7Z7B0 1213 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 MLKLQ8NB16 471 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 RBM17Q96I25 401 aaKnown RBP9.84□□□□□ -0.83
NECAP1-218ENST00000639595 RTFDC1Q9BY42 306 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-218ENST00000639595 SH3GLB2Q9NR46 395 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 SERTAD1Q9UHV2 236 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 MYH2Q9UKX2 1941 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 ST5P78524 1137 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 MORC3Q14149 939 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 DIXDC1Q155Q3 683 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 SH3RF1Q7Z6J0 888 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 FAM177A1Q8N128 213 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-218ENST00000639595 CRAMP1Q96RY5 1269 aa9.84□□□□□ -0.83
NECAP1-218ENST00000639595 MAN1B1Q9UKM7 699 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms