RNA–Protein interactions for RNA: ENST00000639481.1

CROCCP2-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best) BASIC

Gene CROCCP2, Length 1,296 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-205ENST00000639481 SEPT2Q15019 361 aa23.26■■□□□ 1.31
CROCCP2-205ENST00000639481 TSHZ3Q63HK5 1081 aa23.26■■□□□ 1.31
CROCCP2-205ENST00000639481 U2AF1L4Q8WU68 220 aaKnown RBP23.26■■□□□ 1.31
CROCCP2-205ENST00000639481 DYNLL2Q96FJ2 89 aa23.26■■□□□ 1.31
CROCCP2-205ENST00000639481 KIAA1683Q9H0B3 1180 aa23.26■■□□□ 1.31
CROCCP2-205ENST00000639481 FEZ1Q99689 392 aa23.25■■□□□ 1.31
CROCCP2-205ENST00000639481 PUS7LQ9H0K6 701 aaKnown RBP23.25■■□□□ 1.31
CROCCP2-205ENST00000639481 PORCNQ9H237 461 aa23.25■■□□□ 1.31
CROCCP2-205ENST00000639481 PCDHB15Q9Y5E8 787 aa23.25■■□□□ 1.31
CROCCP2-205ENST00000639481 CYP2D7A0A087X1C5 515 aa23.24■■□□□ 1.31
CROCCP2-205ENST00000639481 A0A1W2PRG0 241 aa23.24■■□□□ 1.31
CROCCP2-205ENST00000639481 CNMDO75829 334 aa23.24■■□□□ 1.31
CROCCP2-205ENST00000639481 VCAM1P19320 739 aa23.24■■□□□ 1.31
CROCCP2-205ENST00000639481 ERVK-9P63128 1117 aa23.24■■□□□ 1.31
CROCCP2-205ENST00000639481 ERVK-24P63145 666 aa23.24■■□□□ 1.31
CROCCP2-205ENST00000639481 TRIM32Q13049 653 aa23.24■■□□□ 1.31
CROCCP2-205ENST00000639481 UBE3CQ15386 1083 aa23.24■■□□□ 1.31
CROCCP2-205ENST00000639481 GPRC5AQ8NFJ5 357 aa23.24■■□□□ 1.31
CROCCP2-205ENST00000639481 NKX2-3Q8TAU0 364 aa23.24■■□□□ 1.31
CROCCP2-205ENST00000639481 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.24■■□□□ 1.313e-12■■■■■ 43.9
CROCCP2-205ENST00000639481 CABP5Q9NP86 173 aa23.24■■□□□ 1.31
CROCCP2-205ENST00000639481 ECHDC1Q9NTX5 307 aa23.24■■□□□ 1.31
CROCCP2-205ENST00000639481 SGPL1O95470 568 aa23.23■■□□□ 1.31
CROCCP2-205ENST00000639481 CATSPERGQ6ZRH7 1159 aa23.23■■□□□ 1.31
CROCCP2-205ENST00000639481 PAGR1Q9BTK6 254 aa23.23■■□□□ 1.31
CROCCP2-205ENST00000639481 PAK6Q9NQU5 681 aaPredicted RBP23.23■■□□□ 1.31
CROCCP2-205ENST00000639481 ATP8A2Q9NTI2 1148 aa23.23■■□□□ 1.31
CROCCP2-205ENST00000639481 PARP14Q460N5 1801 aa23.22■■□□□ 1.31
CROCCP2-205ENST00000639481 USP17L15C9J2P7 530 aa23.22■■□□□ 1.31
CROCCP2-205ENST00000639481 USP17L13C9JLJ4 530 aa23.22■■□□□ 1.31
CROCCP2-205ENST00000639481 USP17L11C9JVI0 530 aa23.22■■□□□ 1.31
CROCCP2-205ENST00000639481 USP17L18D6R9N7 530 aa23.22■■□□□ 1.31
CROCCP2-205ENST00000639481 USP17L22D6RA61 530 aa23.22■■□□□ 1.31
CROCCP2-205ENST00000639481 USP17L17D6RBQ6 530 aa23.22■■□□□ 1.31
CROCCP2-205ENST00000639481 USP17L19D6RCP7 530 aa23.22■■□□□ 1.31
CROCCP2-205ENST00000639481 USP17L20D6RJB6 530 aa23.22■■□□□ 1.31
CROCCP2-205ENST00000639481 USP17L24Q0WX57 530 aa23.22■■□□□ 1.31
CROCCP2-205ENST00000639481 CLEC10AQ8IUN9 316 aa23.22■■□□□ 1.31
CROCCP2-205ENST00000639481 ALPK3Q96L96 1907 aa23.21■■□□□ 1.31
CROCCP2-205ENST00000639481 MPHOSPH10O00566 681 aaKnown RBP23.21■■□□□ 1.31
CROCCP2-205ENST00000639481 USP14P54578 494 aa23.21■■□□□ 1.31
CROCCP2-205ENST00000639481 KIAA1755Q5JYT7 1200 aa23.21■■□□□ 1.31
CROCCP2-205ENST00000639481 C12orf60Q5U649 245 aa23.21■■□□□ 1.31
CROCCP2-205ENST00000639481 SIAH1Q8IUQ4 282 aa23.21■■□□□ 1.31
CROCCP2-205ENST00000639481 TRIB2Q92519 343 aa23.21■■□□□ 1.31
CROCCP2-205ENST00000639481 DEFB118Q96PH6 123 aa23.21■■□□□ 1.31
CROCCP2-205ENST00000639481 A0A0G2JMZ2 1700 aa23.21■■□□□ 1.31
CROCCP2-205ENST00000639481 USP17L12C9JPN9 530 aa23.2■■□□□ 1.3
CROCCP2-205ENST00000639481 USP17L21D6R901 530 aa23.2■■□□□ 1.3
CROCCP2-205ENST00000639481 HMGCRP04035 888 aa23.2■■□□□ 1.3
CROCCP2-205ENST00000639481 AKR1B1P15121 316 aa23.2■■□□□ 1.3
CROCCP2-205ENST00000639481 CYP2B6P20813 491 aa23.2■■□□□ 1.3
CROCCP2-205ENST00000639481 RRP1P56182 461 aaKnown RBP23.2■■□□□ 1.3
CROCCP2-205ENST00000639481 USP6NLQ92738 828 aa23.2■■□□□ 1.3
CROCCP2-205ENST00000639481 RPAP3Q9H6T3 665 aaPredicted RBP23.2■■□□□ 1.3
CROCCP2-205ENST00000639481 SWAP70Q9UH65 585 aa23.2■■□□□ 1.3
CROCCP2-205ENST00000639481 SLC4A4Q9Y6R1 1079 aa23.2■■□□□ 1.3
CROCCP2-205ENST00000639481 GREB1LQ9C091 1923 aaPredicted RBP23.2■■□□□ 1.3
CROCCP2-205ENST00000639481 GPR142Q7Z601 462 aa23.19■■□□□ 1.3
CROCCP2-205ENST00000639481 KBTBD3Q8NAB2 608 aa23.19■■□□□ 1.3
CROCCP2-205ENST00000639481 GTF3C2Q8WUA4 911 aaPredicted RBP23.19■■□□□ 1.3
CROCCP2-205ENST00000639481 BTBD7Q9P203 1132 aa23.19■■□□□ 1.3
CROCCP2-205ENST00000639481 SPDYE16A6NNV3 312 aaPredicted RBP23.18■■□□□ 1.3
CROCCP2-205ENST00000639481 MAPK4P31152 587 aa23.18■■□□□ 1.3
CROCCP2-205ENST00000639481 CDK8P49336 464 aa23.18■■□□□ 1.3
CROCCP2-205ENST00000639481 MORN1Q5T089 497 aa23.18■■□□□ 1.3
CROCCP2-205ENST00000639481 CTR9Q6PD62 1173 aa23.18■■□□□ 1.3
CROCCP2-205ENST00000639481 LBX2Q6XYB7 198 aa23.18■■□□□ 1.3
CROCCP2-205ENST00000639481 TMEM179Q6ZVK1 233 aa23.18■■□□□ 1.3
CROCCP2-205ENST00000639481 OTUD7AQ8TE49 926 aaPredicted RBP23.18■■□□□ 1.3
CROCCP2-205ENST00000639481 OSBP2Q969R2 916 aa23.18■■□□□ 1.3
CROCCP2-205ENST00000639481 NUDT12Q9BQG2 462 aa23.18■■□□□ 1.3
CROCCP2-205ENST00000639481 CRISPLD2Q9H0B8 497 aa23.18■■□□□ 1.3
CROCCP2-205ENST00000639481 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.18■■□□□ 1.33e-16■■□□□ 14.4
CROCCP2-205ENST00000639481 RABGAP1Q9Y3P9 1069 aa23.18■■□□□ 1.3
CROCCP2-205ENST00000639481 CEP290O15078 2479 aa23.17■■□□□ 1.3
CROCCP2-205ENST00000639481 H0YGN5 161 aa23.17■■□□□ 1.3
CROCCP2-205ENST00000639481 FARP2O94887 1054 aaPredicted RBP23.17■■□□□ 1.3
CROCCP2-205ENST00000639481 ZSCAN25Q6NSZ9 544 aa23.17■■□□□ 1.3
CROCCP2-205ENST00000639481 C16orf86Q6ZW13 317 aa23.17■■□□□ 1.3
CROCCP2-205ENST00000639481 STRBPQ96SI9 672 aaKnown RBP23.17■■□□□ 1.3
CROCCP2-205ENST00000639481 CCL14Q16627 93 aa23.16■■□□□ 1.3
CROCCP2-205ENST00000639481 SOCS4Q8WXH5 440 aa23.16■■□□□ 1.3
CROCCP2-205ENST00000639481 COL11A1P12107 1806 aaPredicted RBP23.16■■□□□ 1.3
CROCCP2-205ENST00000639481 RPTORQ8N122 1335 aa23.15■■□□□ 1.3
CROCCP2-205ENST00000639481 TFRCP02786 760 aaKnown RBP23.15■■□□□ 1.3
CROCCP2-205ENST00000639481 XRCC5P13010 732 aaKnown RBP23.15■■□□□ 1.3
CROCCP2-205ENST00000639481 HABP4Q5JVS0 413 aaKnown RBP23.15■■□□□ 1.3
CROCCP2-205ENST00000639481 MAP3K21Q5TCX8 1036 aa23.15■■□□□ 1.3
CROCCP2-205ENST00000639481 PLEKHH3Q7Z736 793 aa23.15■■□□□ 1.3
CROCCP2-205ENST00000639481 PI4K2BQ8TCG2 481 aa23.15■■□□□ 1.3
CROCCP2-205ENST00000639481 GCC1Q96CN9 775 aa23.15■■□□□ 1.3
CROCCP2-205ENST00000639481 FRMPD3Q5JV73 1810 aa23.15■■□□□ 1.3
CROCCP2-205ENST00000639481 GSG1L2A8MUP6 293 aa23.14■■□□□ 1.29
CROCCP2-205ENST00000639481 APPBP2Q92624 585 aa23.14■■□□□ 1.29
CROCCP2-205ENST00000639481 GPATCH3Q96I76 525 aa23.14■■□□□ 1.29
CROCCP2-205ENST00000639481 CRBNQ96SW2 442 aa23.14■■□□□ 1.29
CROCCP2-205ENST00000639481 RANBP2P49792 3224 aaKnown RBP23.14■■□□□ 1.29
CROCCP2-205ENST00000639481 ICA1Q05084 483 aa23.13■■□□□ 1.29
CROCCP2-205ENST00000639481 DIS3LQ8TF46 1054 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms