RNA–Protein interactions for RNA: ENST00000639053.1

SPIN3-219, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,778 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-219ENST00000639053 SRCAPQ6ZRS2 3230 aa17.75■□□□□ 0.43
SPIN3-219ENST00000639053 ZBTB43O43298 467 aa17.75■□□□□ 0.43
SPIN3-219ENST00000639053 LMOD1P29536 600 aaPredicted RBP17.75■□□□□ 0.43
SPIN3-219ENST00000639053 TNNI2P48788 182 aa17.75■□□□□ 0.43
SPIN3-219ENST00000639053 CSPP1Q1MSJ5 1256 aa17.75■□□□□ 0.43
SPIN3-219ENST00000639053 DPY19L2Q6NUT2 758 aa17.75■□□□□ 0.43
SPIN3-219ENST00000639053 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.75■□□□□ 0.43
SPIN3-219ENST00000639053 TCP11L1Q9NUJ3 509 aa17.75■□□□□ 0.43
SPIN3-219ENST00000639053 PGAP2Q9UHJ9 254 aa17.75■□□□□ 0.43
SPIN3-219ENST00000639053 MTMR6Q9Y217 621 aa17.75■□□□□ 0.43
SPIN3-219ENST00000639053 MICU3Q86XE3 530 aa17.74■□□□□ 0.43
SPIN3-219ENST00000639053 CCDC144CPQ8IYA2 1237 aa17.74■□□□□ 0.43
SPIN3-219ENST00000639053 ZNF654Q8IZM8 581 aa17.74■□□□□ 0.43
SPIN3-219ENST00000639053 JAK2O60674 1132 aa17.74■□□□□ 0.43
SPIN3-219ENST00000639053 NCLP19338 710 aaKnown RBP17.74■□□□□ 0.43
SPIN3-219ENST00000639053 METAP2P50579 478 aaKnown RBP eCLIP17.74■□□□□ 0.43
SPIN3-219ENST00000639053 ANGEL2Q5VTE6 544 aaKnown RBP17.74■□□□□ 0.43
SPIN3-219ENST00000639053 CAVIN1Q6NZI2 390 aaKnown RBP17.74■□□□□ 0.43
SPIN3-219ENST00000639053 SYNE3Q6ZMZ3 975 aa17.74■□□□□ 0.43
SPIN3-219ENST00000639053 ADARB2Q9NS39 739 aaKnown RBP17.74■□□□□ 0.43
SPIN3-219ENST00000639053 GOLGA8AA7E2F4 631 aa17.73■□□□□ 0.43
SPIN3-219ENST00000639053 CTDNEP1O95476 244 aa17.73■□□□□ 0.43
SPIN3-219ENST00000639053 TNFAIP1Q13829 316 aa17.73■□□□□ 0.43
SPIN3-219ENST00000639053 ZSCAN23Q3MJ62 389 aa17.73■□□□□ 0.43
SPIN3-219ENST00000639053 CCDC178Q5BJE1 867 aa17.73■□□□□ 0.43
SPIN3-219ENST00000639053 TATDN1Q6P1N9 297 aa17.73■□□□□ 0.43
SPIN3-219ENST00000639053 ANKS1AQ92625 1134 aa17.73■□□□□ 0.43
SPIN3-219ENST00000639053 SYAP1Q96A49 352 aaPredicted RBP17.73■□□□□ 0.43
SPIN3-219ENST00000639053 LLPHQ9BRT6 129 aaKnown RBP17.73■□□□□ 0.43
SPIN3-219ENST00000639053 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.73■□□□□ 0.43
SPIN3-219ENST00000639053 PLIN4Q96Q06 1357 aa17.72■□□□□ 0.43
SPIN3-219ENST00000639053 ZC3H4Q9UPT8 1303 aaKnown RBP17.72■□□□□ 0.43
SPIN3-219ENST00000639053 IGKV6D-41A0A0C4DH26 115 aa17.72■□□□□ 0.43
SPIN3-219ENST00000639053 CDC27P30260 824 aa17.72■□□□□ 0.43
SPIN3-219ENST00000639053 SHROOM1Q2M3G4 852 aaPredicted RBP17.72■□□□□ 0.43
SPIN3-219ENST00000639053 CERKLQ49MI3 558 aaPredicted RBP17.72■□□□□ 0.43
SPIN3-219ENST00000639053 DGKHQ86XP1 1220 aa17.72■□□□□ 0.43
SPIN3-219ENST00000639053 NSUN7Q8NE18 718 aaKnown RBP17.72■□□□□ 0.43
SPIN3-219ENST00000639053 NUP133Q8WUM0 1156 aa17.72■□□□□ 0.43
SPIN3-219ENST00000639053 CEP95Q96GE4 821 aa17.72■□□□□ 0.43
SPIN3-219ENST00000639053 L3MBTL3Q96JM7 780 aaPredicted RBP17.72■□□□□ 0.43
SPIN3-219ENST00000639053 CCDC17Q96LX7 622 aa17.72■□□□□ 0.43
SPIN3-219ENST00000639053 TEPSINQ96N21 525 aa17.72■□□□□ 0.43
SPIN3-219ENST00000639053 FAM217BQ9NTX9 383 aaPredicted RBP17.72■□□□□ 0.43
SPIN3-219ENST00000639053 GGA3Q9NZ52 723 aa17.72■□□□□ 0.43
SPIN3-219ENST00000639053 TAOK2Q9UL54 1235 aa17.72■□□□□ 0.43
SPIN3-219ENST00000639053 GLTPD2A6NH11 291 aa17.71■□□□□ 0.43
SPIN3-219ENST00000639053 MPHOSPH10O00566 681 aaKnown RBP17.71■□□□□ 0.43
SPIN3-219ENST00000639053 ADD1P35611 737 aaKnown RBP17.71■□□□□ 0.43
SPIN3-219ENST00000639053 RRP1BQ14684 758 aaKnown RBP17.71■□□□□ 0.43
SPIN3-219ENST00000639053 LARP1BQ659C4 914 aaKnown RBP17.71■□□□□ 0.43
SPIN3-219ENST00000639053 CATIPQ7Z7H3 387 aa17.71■□□□□ 0.43
SPIN3-219ENST00000639053 GAS2L3Q86XJ1 694 aa17.71■□□□□ 0.43
SPIN3-219ENST00000639053 DEFB129Q9H1M3 183 aa17.71■□□□□ 0.43
SPIN3-219ENST00000639053 HERC5Q9UII4 1024 aaKnown RBP17.71■□□□□ 0.43
SPIN3-219ENST00000639053 STX8Q9UNK0 236 aa17.71■□□□□ 0.43
SPIN3-219ENST00000639053 PPFIA3O75145 1194 aa17.71■□□□□ 0.43
SPIN3-219ENST00000639053 MIGA2Q7L4E1 593 aa17.71■□□□□ 0.43
SPIN3-219ENST00000639053 CLEC10AQ8IUN9 316 aa17.71■□□□□ 0.43
SPIN3-219ENST00000639053 APOBEC3FQ8IUX4 373 aaKnown RBP17.71■□□□□ 0.43
SPIN3-219ENST00000639053 TMEM47Q9BQJ4 181 aa17.71■□□□□ 0.43
SPIN3-219ENST00000639053 KAT14Q9H8E8 782 aa17.71■□□□□ 0.43
SPIN3-219ENST00000639053 NID2Q14112 1375 aa17.7■□□□□ 0.42
SPIN3-219ENST00000639053 MYH8P13535 1937 aa17.7■□□□□ 0.42
SPIN3-219ENST00000639053 PTPDC1A2A3K4 754 aa17.7■□□□□ 0.42
SPIN3-219ENST00000639053 GDF11O95390 407 aa17.7■□□□□ 0.42
SPIN3-219ENST00000639053 JAG1P78504 1218 aa17.7■□□□□ 0.42
SPIN3-219ENST00000639053 SMARCC2Q8TAQ2 1214 aa17.7■□□□□ 0.42
SPIN3-219ENST00000639053 DDX11Q96FC9 970 aa17.7■□□□□ 0.42
SPIN3-219ENST00000639053 DHX16O60231 1041 aaKnown RBP17.69■□□□□ 0.42
SPIN3-219ENST00000639053 NOVP48745 357 aa17.69■□□□□ 0.42
SPIN3-219ENST00000639053 RCAN1P53805 252 aa17.69■□□□□ 0.42
SPIN3-219ENST00000639053 TROAPQ12815 778 aa17.69■□□□□ 0.42
SPIN3-219ENST00000639053 RTN1Q16799 776 aa17.69■□□□□ 0.42
SPIN3-219ENST00000639053 USP48Q86UV5 1035 aa17.69■□□□□ 0.42
SPIN3-219ENST00000639053 FANCBQ8NB91 859 aa17.69■□□□□ 0.42
SPIN3-219ENST00000639053 CHAMP1Q96JM3 812 aa17.69■□□□□ 0.42
SPIN3-219ENST00000639053 MTMR4Q9NYA4 1195 aa17.69■□□□□ 0.42
SPIN3-219ENST00000639053 CPLX1O14810 134 aa17.68■□□□□ 0.42
SPIN3-219ENST00000639053 TBC1D12O60347 775 aa17.68■□□□□ 0.42
SPIN3-219ENST00000639053 DDAH1O94760 285 aa17.68■□□□□ 0.42
SPIN3-219ENST00000639053 ABCB5Q2M3G0 1257 aa17.68■□□□□ 0.42
SPIN3-219ENST00000639053 PNMA1Q8ND90 353 aa17.68■□□□□ 0.42
SPIN3-219ENST00000639053 UTRNP46939 3433 aa17.68■□□□□ 0.42
SPIN3-219ENST00000639053 EPHX2P34913 555 aa17.68■□□□□ 0.42
SPIN3-219ENST00000639053 UBE2HP62256 183 aa17.68■□□□□ 0.42
SPIN3-219ENST00000639053 HMGN5P82970 282 aaKnown RBP17.68■□□□□ 0.42
SPIN3-219ENST00000639053 MAP3K10Q02779 954 aa17.68■□□□□ 0.42
SPIN3-219ENST00000639053 NBPF12Q5TAG4 269 aaPredicted RBP17.68■□□□□ 0.42
SPIN3-219ENST00000639053 PRAMEF18Q5VWM3 479 aa17.68■□□□□ 0.42
SPIN3-219ENST00000639053 KIF3AQ9Y496 699 aa17.68■□□□□ 0.42
SPIN3-219ENST00000639053 GREB1LQ9C091 1923 aaPredicted RBP17.67■□□□□ 0.42
SPIN3-219ENST00000639053 VPS37CA5D8V6 355 aaPredicted RBP17.67■□□□□ 0.42
SPIN3-219ENST00000639053 CALM1P0DP23 149 aa17.67■□□□□ 0.42
SPIN3-219ENST00000639053 CALM2P0DP24 149 aa17.67■□□□□ 0.42
SPIN3-219ENST00000639053 CALM3P0DP25 149 aa17.67■□□□□ 0.42
SPIN3-219ENST00000639053 TOP1P11387 765 aaKnown RBP17.67■□□□□ 0.42
SPIN3-219ENST00000639053 GUCY1A2P33402 732 aa17.67■□□□□ 0.42
SPIN3-219ENST00000639053 SEPT2Q15019 361 aa17.67■□□□□ 0.42
SPIN3-219ENST00000639053 NTRK3Q16288 839 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms