RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 ST13P50502 369 aaKnown RBP6.7□□□□□ -1.34
CCDC7-211ENST00000638889 MAP3K11Q16584 847 aa6.7□□□□□ -1.34
CCDC7-211ENST00000638889 LCE4AQ5TA78 99 aa6.7□□□□□ -1.34
CCDC7-211ENST00000638889 CCDC84Q86UT8 332 aaPredicted RBP6.7□□□□□ -1.34
CCDC7-211ENST00000638889 ACSF2Q96CM8 615 aaPredicted RBP6.7□□□□□ -1.34
CCDC7-211ENST00000638889 DPH2Q9BQC3 489 aaPredicted RBP6.7□□□□□ -1.34
CCDC7-211ENST00000638889 GPR62Q9BZJ7 368 aa6.7□□□□□ -1.34
CCDC7-211ENST00000638889 NSUN3Q9H649 340 aaKnown RBP6.7□□□□□ -1.34
CCDC7-211ENST00000638889 DNAJC25-GNG10A0A024R161 153 aa6.69□□□□□ -1.34
CCDC7-211ENST00000638889 HPXP02790 462 aa6.69□□□□□ -1.34
CCDC7-211ENST00000638889 KRT1P04264 644 aa6.69□□□□□ -1.34
CCDC7-211ENST00000638889 SRFP11831 508 aa6.69□□□□□ -1.34
CCDC7-211ENST00000638889 GAB4Q2WGN9 574 aa6.69□□□□□ -1.34
CCDC7-211ENST00000638889 RALGPS1Q5JS13 557 aa6.69□□□□□ -1.34
CCDC7-211ENST00000638889 C1QL4Q86Z23 238 aa6.69□□□□□ -1.34
CCDC7-211ENST00000638889 MYLIPQ8WY64 445 aa6.69□□□□□ -1.34
CCDC7-211ENST00000638889 Q96M66 194 aa6.69□□□□□ -1.34
CCDC7-211ENST00000638889 DUSP15Q9H1R2 295 aaPredicted RBP6.69□□□□□ -1.34
CCDC7-211ENST00000638889 KCNH3Q9ULD8 1083 aa6.69□□□□□ -1.34
CCDC7-211ENST00000638889 TIMELESSQ9UNS1 1208 aa6.69□□□□□ -1.34
CCDC7-211ENST00000638889 C1QTNF9P0C862 333 aa6.68□□□□□ -1.34
CCDC7-211ENST00000638889 TPP2P29144 1249 aaPredicted RBP6.68□□□□□ -1.34
CCDC7-211ENST00000638889 TAF1CQ15572 869 aaPredicted RBP6.68□□□□□ -1.34
CCDC7-211ENST00000638889 MEI1Q5TIA1 1274 aa6.68□□□□□ -1.34
CCDC7-211ENST00000638889 CREG2Q8IUH2 290 aa6.68□□□□□ -1.34
CCDC7-211ENST00000638889 LRRC56Q8IYG6 542 aaPredicted RBP6.68□□□□□ -1.34
CCDC7-211ENST00000638889 DIRC2Q96SL1 478 aa6.68□□□□□ -1.34
CCDC7-211ENST00000638889 KRTAP4-9Q9BYQ8 210 aa6.68□□□□□ -1.34
CCDC7-211ENST00000638889 EPB41L4BQ9H329 900 aa6.68□□□□□ -1.34
CCDC7-211ENST00000638889 DCP1AQ9NPI6 582 aaPredicted RBP6.68□□□□□ -1.34
CCDC7-211ENST00000638889 GPATCH2Q9NW75 528 aa6.68□□□□□ -1.34
CCDC7-211ENST00000638889 ANKRD33BA6NCL7 494 aa6.67□□□□□ -1.34
CCDC7-211ENST00000638889 TMEM253P0C7T8 217 aa6.67□□□□□ -1.34
CCDC7-211ENST00000638889 YARSP54577 528 aaKnown RBP6.67□□□□□ -1.34
CCDC7-211ENST00000638889 DAB2P98082 770 aa6.67□□□□□ -1.34
CCDC7-211ENST00000638889 TMEM201Q5SNT2 666 aa6.67□□□□□ -1.34
CCDC7-211ENST00000638889 PHC3Q8NDX5 983 aa6.67□□□□□ -1.34
CCDC7-211ENST00000638889 PPP1R13LQ8WUF5 828 aa6.67□□□□□ -1.34
CCDC7-211ENST00000638889 CYB5D2Q8WUJ1 264 aa6.67□□□□□ -1.34
CCDC7-211ENST00000638889 JARID2Q92833 1246 aaPredicted RBP6.67□□□□□ -1.34
CCDC7-211ENST00000638889 ADAMTS10Q9H324 1103 aa6.67□□□□□ -1.34
CCDC7-211ENST00000638889 MED14OSP0DP75 135 aa6.66□□□□□ -1.34
CCDC7-211ENST00000638889 PLCG1P19174 1290 aa6.66□□□□□ -1.34
CCDC7-211ENST00000638889 HK2P52789 917 aa6.66□□□□□ -1.34
CCDC7-211ENST00000638889 TSPYL5Q86VY4 417 aaPredicted RBP6.66□□□□□ -1.34
CCDC7-211ENST00000638889 DTWD2Q8NBA8 298 aa6.66□□□□□ -1.34
CCDC7-211ENST00000638889 PDZD8Q8NEN9 1154 aa6.66□□□□□ -1.34
CCDC7-211ENST00000638889 RNF19AQ9NV58 838 aa6.66□□□□□ -1.34
CCDC7-211ENST00000638889 PARP2Q9UGN5 583 aa6.66□□□□□ -1.34
CCDC7-211ENST00000638889 DUSP13Q9UII6 198 aa6.66□□□□□ -1.34
CCDC7-211ENST00000638889 TLR6Q9Y2C9 796 aa6.66□□□□□ -1.34
CCDC7-211ENST00000638889 USP31Q70CQ4 1352 aa6.66□□□□□ -1.34
CCDC7-211ENST00000638889 CILPO75339 1184 aa6.65□□□□□ -1.34
CCDC7-211ENST00000638889 BPNT1O95861 308 aa6.65□□□□□ -1.34
CCDC7-211ENST00000638889 GLDCP23378 1020 aa6.65□□□□□ -1.34
CCDC7-211ENST00000638889 ERVFC1P60507 584 aa6.65□□□□□ -1.34
CCDC7-211ENST00000638889 PSMD2Q13200 908 aa6.65□□□□□ -1.34
CCDC7-211ENST00000638889 LCNL1Q6ZST4 164 aa6.65□□□□□ -1.34
CCDC7-211ENST00000638889 SLFN12Q8IYM2 578 aa6.65□□□□□ -1.34
CCDC7-211ENST00000638889 LILRA2Q8N149 483 aa6.65□□□□□ -1.34
CCDC7-211ENST00000638889 OXR1Q8N573 874 aa6.65□□□□□ -1.34
CCDC7-211ENST00000638889 FAM13CQ8NE31 585 aa6.65□□□□□ -1.34
CCDC7-211ENST00000638889 RNF141Q8WVD5 230 aa6.65□□□□□ -1.34
CCDC7-211ENST00000638889 DHX38Q92620 1227 aaKnown RBP6.65□□□□□ -1.34
CCDC7-211ENST00000638889 SLC26A8Q96RN1 970 aa6.65□□□□□ -1.34
CCDC7-211ENST00000638889 CD320Q9NPF0 282 aa6.65□□□□□ -1.34
CCDC7-211ENST00000638889 WASH4PA8MWX3 477 aa6.64□□□□□ -1.35
CCDC7-211ENST00000638889 ZSCAN22P10073 491 aaPredicted RBP6.64□□□□□ -1.35
CCDC7-211ENST00000638889 LMNB2Q03252 620 aa6.64□□□□□ -1.35
CCDC7-211ENST00000638889 EGR3Q06889 387 aa6.64□□□□□ -1.35
CCDC7-211ENST00000638889 NR0B2Q15466 257 aa6.64□□□□□ -1.35
CCDC7-211ENST00000638889 SND1Q7KZF4 910 aaKnown RBP eCLIP6.64□□□□□ -1.35
CCDC7-211ENST00000638889 TMC4Q7Z404 712 aa6.64□□□□□ -1.35
CCDC7-211ENST00000638889 AMIGO3Q86WK7 504 aa6.64□□□□□ -1.35
CCDC7-211ENST00000638889 CORINQ9Y5Q5 1042 aa6.64□□□□□ -1.35
CCDC7-211ENST00000638889 PRR36Q9H6K5 1346 aa6.64□□□□□ -1.35
CCDC7-211ENST00000638889 FAM221AA4D161 298 aa6.63□□□□□ -1.35
CCDC7-211ENST00000638889 UPK3BL1B0FP48 263 aa6.63□□□□□ -1.35
CCDC7-211ENST00000638889 UPK3BL2E5RIL1 263 aa6.63□□□□□ -1.35
CCDC7-211ENST00000638889 ZGLP1P0C6A0 271 aa6.63□□□□□ -1.35
CCDC7-211ENST00000638889 XPCQ01831 940 aaPredicted RBP6.63□□□□□ -1.35
CCDC7-211ENST00000638889 CAMK2GQ13555 558 aaPredicted RBP6.63□□□□□ -1.35
CCDC7-211ENST00000638889 KCNA10Q16322 511 aa6.63□□□□□ -1.35
CCDC7-211ENST00000638889 BNC2Q6ZN30 1099 aaPredicted RBP6.63□□□□□ -1.35
CCDC7-211ENST00000638889 ATG14Q6ZNE5 492 aa6.63□□□□□ -1.35
CCDC7-211ENST00000638889 GATAD2BQ8WXI9 593 aa6.63□□□□□ -1.35
CCDC7-211ENST00000638889 SYTL4Q96C24 671 aaPredicted RBP6.63□□□□□ -1.35
CCDC7-211ENST00000638889 SP110Q9HB58 689 aa6.63□□□□□ -1.35
CCDC7-211ENST00000638889 FITM1A5D6W6 292 aa6.62□□□□□ -1.35
CCDC7-211ENST00000638889 TCAF2A6NFQ2 919 aa6.62□□□□□ -1.35
CCDC7-211ENST00000638889 NPIPB6E9PJ23 425 aa6.62□□□□□ -1.35
CCDC7-211ENST00000638889 RBAK-RBAKDNI3L0D1 243 aa6.62□□□□□ -1.35
CCDC7-211ENST00000638889 CTSHP09668 335 aa6.62□□□□□ -1.35
CCDC7-211ENST00000638889 LTKP29376 864 aa6.62□□□□□ -1.35
CCDC7-211ENST00000638889 IRF2BP1Q8IU81 584 aa6.62□□□□□ -1.35
CCDC7-211ENST00000638889 RAPGEFL1Q9UHV5 662 aa6.62□□□□□ -1.35
CCDC7-211ENST00000638889 ETV2O00321 342 aaPredicted RBP6.61□□□□□ -1.35
CCDC7-211ENST00000638889 PWP1Q13610 501 aa6.61□□□□□ -1.35
CCDC7-211ENST00000638889 SPPL2CQ8IUH8 684 aa6.61□□□□□ -1.35
CCDC7-211ENST00000638889 KCNN1Q92952 543 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms