RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	ACTN3	Q08043	901 aa	Predicted RBP	12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	DRP2	Q13474	957 aa		12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	CCDC70	Q6NSX1	233 aa		12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	IQCA1	Q86XH1	822 aa		12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	EHBP1	Q8NDI1	1231 aa		12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	GDAP1L1	Q96MZ0	367 aa		12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	SLF1	Q9BQI6	1058 aa		12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	RABEP2	Q9H5N1	569 aa		12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	PAG1	Q9NWQ8	432 aa		12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	LTN1	O94822	1766 aa		12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	BTBD11	A6QL63	1104 aa		12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	NAP1L1	P55209	391 aa	Known RBP	12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	CUL4B	Q13620	913 aa		12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	C11orf91	Q3C1V1	193 aa		12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	ALS2CL	Q60I27	953 aa		12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	ZNF662	Q6ZS27	426 aa		12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	FMNL3	Q8IVF7	1028 aa		12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	RBM28	Q9NW13	759 aa	Known RBP	12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	REXO2	Q9Y3B8	237 aa	Known RBP	12.49	□□□□□ -0.41
STRADA-231	ENST00000638708	ACTN4	O43707	911 aa	Known RBP	12.48	□□□□□ -0.41
STRADA-231	ENST00000638708	IGKV5-2	P06315	115 aa		12.48	□□□□□ -0.41
STRADA-231	ENST00000638708	ANTXR2	P58335	489 aa		12.48	□□□□□ -0.41
STRADA-231	ENST00000638708	PTPN12	Q05209	780 aa	Known RBP	12.48	□□□□□ -0.41
STRADA-231	ENST00000638708	PDCL	Q13371	301 aa		12.48	□□□□□ -0.41
STRADA-231	ENST00000638708	CCDC40	Q4G0X9	1142 aa		12.48	□□□□□ -0.41
STRADA-231	ENST00000638708	EPHA10	Q5JZY3	1008 aa		12.48	□□□□□ -0.41
STRADA-231	ENST00000638708	CEP85L	Q5SZL2	805 aa		12.48	□□□□□ -0.41
STRADA-231	ENST00000638708	SND1	Q7KZF4	910 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
STRADA-231	ENST00000638708	ANKLE2	Q86XL3	938 aa		12.48	□□□□□ -0.41
STRADA-231	ENST00000638708	STK11IP	Q8N1F8	1099 aa		12.48	□□□□□ -0.41
STRADA-231	ENST00000638708	LGR6	Q9HBX8	967 aa		12.48	□□□□□ -0.41
STRADA-231	ENST00000638708	HDAC6	Q9UBN7	1215 aa		12.48	□□□□□ -0.41
STRADA-231	ENST00000638708	GUCA1B	Q9UMX6	200 aa		12.48	□□□□□ -0.41
STRADA-231	ENST00000638708	ANO9	A1A5B4	782 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	SRRM3	A6NNA2	597 aa	Predicted RBP	12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	GOLIM4	O00461	696 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	POLR2D	O15514	142 aa	Known RBP	12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	ZMYND10	O75800	440 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	NDUFA10	O95299	355 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	IRX1	P78414	480 aa	Predicted RBP	12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	TTMP	Q5BVD1	217 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	CCDC50	Q8IVM0	306 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	ZNF579	Q8NAF0	562 aa	Known RBP	12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	CAGE1	Q8TC20	777 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	MAGEC3	Q8TD91	643 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	AIFM3	Q96NN9	605 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	FBXO2	Q9UK22	296 aa	Predicted RBP	12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	MYH13	Q9UKX3	1938 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	NEURL1B	A8MQ27	555 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	RNF113A	O15541	343 aa	Known RBP	12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	PTPRE	P23469	700 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	IMMT	Q16891	758 aa	Known RBP	12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	NAA35	Q5VZE5	725 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	KDM7A	Q6ZMT4	941 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	MMGT1	Q8N4V1	131 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	JAKMIP2	Q96AA8	810 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	RUFY1	Q96T51	708 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	EPN3	Q9H201	632 aa		12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	EPN1	Q9Y6I3	576 aa	Predicted RBP	12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	RGPD8	O14715	1765 aa	Predicted RBP	12.47	□□□□□ -0.41
STRADA-231	ENST00000638708	LAMB4	A4D0S4	1761 aa		12.46	□□□□□ -0.41
STRADA-231	ENST00000638708		M0R2C6	588 aa		12.46	□□□□□ -0.41
STRADA-231	ENST00000638708	ENC1	O14682	589 aa		12.46	□□□□□ -0.41
STRADA-231	ENST00000638708	EPHB4	P54760	987 aa		12.46	□□□□□ -0.41
STRADA-231	ENST00000638708	ITIH3	Q06033	890 aa		12.46	□□□□□ -0.41
STRADA-231	ENST00000638708	ZNF572	Q7Z3I7	529 aa	Predicted RBP	12.46	□□□□□ -0.41
STRADA-231	ENST00000638708	RAB11FIP4	Q86YS3	637 aa		12.46	□□□□□ -0.41
STRADA-231	ENST00000638708	CCDC13	Q8IYE1	715 aa		12.46	□□□□□ -0.41
STRADA-231	ENST00000638708	GRAMD1C	Q8IYS0	662 aa		12.46	□□□□□ -0.41
STRADA-231	ENST00000638708	NCOA7	Q8NI08	942 aa		12.46	□□□□□ -0.41
STRADA-231	ENST00000638708	CAPZA3	Q96KX2	299 aa		12.46	□□□□□ -0.41
STRADA-231	ENST00000638708	NUP88	Q99567	741 aa	Predicted RBP	12.46	□□□□□ -0.41
STRADA-231	ENST00000638708	ACTR5	Q9H9F9	607 aa	Predicted RBP	12.46	□□□□□ -0.41
STRADA-231	ENST00000638708	SLC40A1	Q9NP59	571 aa		12.46	□□□□□ -0.41
STRADA-231	ENST00000638708	TRIM10	Q9UDY6	481 aa		12.46	□□□□□ -0.41
STRADA-231	ENST00000638708	LIMA1	Q9UHB6	759 aa	Known RBP	12.46	□□□□□ -0.41
STRADA-231	ENST00000638708	MYH7	P12883	1935 aa		12.46	□□□□□ -0.41
STRADA-231	ENST00000638708	HSF2BP	O75031	334 aa		12.46	□□□□□ -0.42
STRADA-231	ENST00000638708	CLSTN1	O94985	981 aa		12.46	□□□□□ -0.42
STRADA-231	ENST00000638708	TNFRSF8	P28908	595 aa		12.46	□□□□□ -0.42
STRADA-231	ENST00000638708	TRIM29	Q14134	588 aa		12.46	□□□□□ -0.42
STRADA-231	ENST00000638708	GCKR	Q14397	625 aa		12.46	□□□□□ -0.42
STRADA-231	ENST00000638708	EMC10	Q5UCC4	262 aa		12.46	□□□□□ -0.42
STRADA-231	ENST00000638708	TTC19	Q6DKK2	380 aa	Predicted RBP	12.46	□□□□□ -0.42
STRADA-231	ENST00000638708	EMB	Q6PCB8	327 aa		12.46	□□□□□ -0.42
STRADA-231	ENST00000638708	ZNF473	Q8WTR7	871 aa	Known RBP	12.46	□□□□□ -0.42
STRADA-231	ENST00000638708	RRP36	Q96EU6	259 aa	Known RBP	12.46	□□□□□ -0.42
STRADA-231	ENST00000638708	SEC31B	Q9NQW1	1179 aa		12.46	□□□□□ -0.42
STRADA-231	ENST00000638708	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.46	□□□□□ -0.42
STRADA-231	ENST00000638708	C5	P01031	1676 aa		12.45	□□□□□ -0.42
STRADA-231	ENST00000638708		A0A1B0GUA9	196 aa		12.45	□□□□□ -0.42
STRADA-231	ENST00000638708	SH2B2	O14492	632 aa	Predicted RBP	12.45	□□□□□ -0.42
STRADA-231	ENST00000638708	SRGAP2	O75044	1071 aa		12.45	□□□□□ -0.42
STRADA-231	ENST00000638708	CD44	P16070	742 aa	Known RBP	12.45	□□□□□ -0.42
STRADA-231	ENST00000638708	KCNA6	P17658	529 aa		12.45	□□□□□ -0.42
STRADA-231	ENST00000638708	LSP1	P33241	339 aa		12.45	□□□□□ -0.42
STRADA-231	ENST00000638708	CDR1	P51861	262 aa		12.45	□□□□□ -0.42
STRADA-231	ENST00000638708	HERVK_113	P62684	666 aa		12.45	□□□□□ -0.42
STRADA-231	ENST00000638708	APBA1	Q02410	837 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms