RNA–Protein interactions for RNA: ENST00000638149.1

GABRB3-226, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-226ENST00000638149 NCAPG2Q86XI2 1143 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 FAM9BQ8IZU0 186 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 SPATA5Q8NB90 893 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 ADAMTS19Q8TE59 1207 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 TIFAQ96CG3 184 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 XAGE2Q96GT9 111 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 WDR18Q9BV38 432 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 TANGO6Q9C0B7 1094 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 ZNF576Q9H609 170 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 CABP5Q9NP86 173 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 FLRT1Q9NZU1 646 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 PALD1Q9ULE6 856 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 ZBTB21Q9ULJ3 1066 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 RABGAP1Q9Y3P9 1069 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 TACC3Q9Y6A5 838 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 UTYO14607 1347 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 PTPRCP08575 1304 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 PTPRFP10586 1907 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 CACNA1FO60840 1977 aa5.66□□□□□ -1.5
GABRB3-226ENST00000638149 LOC285556D6RIA3 1793 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 PHIPQ8WWQ0 1821 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 ATAD5Q96QE3 1844 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 DCDC2CA8MYV0 355 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 MAP4K4O95819 1239 aaPredicted RBP5.65□□□□□ -1.5
GABRB3-226ENST00000638149 RARBP10826 455 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 ADORA2AP29274 412 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 SLC4A3P48751 1232 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 RHBDL3P58872 404 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 MRPS5P82675 430 aaKnown RBP5.65□□□□□ -1.5
GABRB3-226ENST00000638149 TFCP2Q12800 502 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 RRP1BQ14684 758 aaKnown RBP5.65□□□□□ -1.5
GABRB3-226ENST00000638149 CCDC184Q52MB2 194 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 PRAMEF19Q5SWL8 479 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 RNF180Q86T96 592 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 FOXP4Q8IVH2 680 aaPredicted RBP5.65□□□□□ -1.5
GABRB3-226ENST00000638149 MRPL50Q8N5N7 158 aaKnown RBP5.65□□□□□ -1.5
GABRB3-226ENST00000638149 USP38Q8NB14 1042 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 NPLOC4Q8TAT6 608 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 ATXN2LQ8WWM7 1075 aaKnown RBP5.65□□□□□ -1.5
GABRB3-226ENST00000638149 C1QTNF1Q9BXJ1 281 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 USP44Q9H0E7 712 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 PRDM12Q9H4Q4 367 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 RPAP3Q9H6T3 665 aaPredicted RBP5.65□□□□□ -1.5
GABRB3-226ENST00000638149 XPNPEP3Q9NQH7 507 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 PDLIM7Q9NR12 457 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 SNRKQ9NRH2 765 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 EMILIN3Q9NT22 766 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 SMC4Q9NTJ3 1288 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 MSRAQ9UJ68 235 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 FBXO3Q9UK99 471 aa5.65□□□□□ -1.5
GABRB3-226ENST00000638149 DOCK3Q8IZD9 2030 aa5.65□□□□□ -1.51
GABRB3-226ENST00000638149 TRIM43BA6NCK2 446 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 SEPT4O43236 478 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 SRGAP3O43295 1099 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 ANP32CO43423 234 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 POLR3DP05423 398 aaPredicted RBP5.64□□□□□ -1.51
GABRB3-226ENST00000638149 RFX5P48382 616 aaPredicted RBP5.64□□□□□ -1.51
GABRB3-226ENST00000638149 G3BP1Q13283 466 aaKnown RBP eCLIP5.64□□□□□ -1.51
GABRB3-226ENST00000638149 ABCB5Q2M3G0 1257 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 SHROOM1Q2M3G4 852 aaPredicted RBP5.64□□□□□ -1.51
GABRB3-226ENST00000638149 CERKLQ49MI3 558 aaPredicted RBP5.64□□□□□ -1.51
GABRB3-226ENST00000638149 CCDC158Q5M9N0 1113 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 PI16Q6UXB8 463 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 SLC44A5Q8NCS7 719 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 USP6NLQ92738 828 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 TRIM43Q96BQ3 446 aaPredicted RBP5.64□□□□□ -1.51
GABRB3-226ENST00000638149 NSUN4Q96CB9 384 aaKnown RBP5.64□□□□□ -1.51
GABRB3-226ENST00000638149 FAM163AQ96GL9 167 aaPredicted RBP5.64□□□□□ -1.51
GABRB3-226ENST00000638149 ASB2Q96Q27 587 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 BCL11AQ9H165 835 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 MTIF3Q9H2K0 278 aaKnown RBP5.64□□□□□ -1.51
GABRB3-226ENST00000638149 STARD7Q9NQZ5 370 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 GINM1Q9NU53 330 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 HMG20BQ9P0W2 317 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 MAST2Q6P0Q8 1798 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 PLXNB2O15031 1838 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 RFX7Q2KHR2 1363 aa5.64□□□□□ -1.51
GABRB3-226ENST00000638149 NPM3O75607 178 aaKnown RBP5.63□□□□□ -1.51
GABRB3-226ENST00000638149 IDH1O75874 414 aaKnown RBP5.63□□□□□ -1.51
GABRB3-226ENST00000638149 PGK1P00558 417 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 UQCRFS1P1P0C7P4 283 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 FCER1AP12319 257 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 CYBAP13498 195 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 VCAM1P19320 739 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 ERCC3P19447 782 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 PPIGQ13427 754 aaKnown RBP eCLIP5.63□□□□□ -1.51
GABRB3-226ENST00000638149 GRB14Q14449 540 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 LRRC41Q15345 812 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 AAK1Q2M2I8 961 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 FAM47AQ5JRC9 791 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 POTEEQ6S8J3 1075 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 CATSPERGQ6ZRH7 1159 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 TMEM199Q8N511 208 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 TRPV1Q8NER1 839 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 NUP133Q8WUM0 1156 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 NECAB3Q96P71 396 aaPredicted RBP5.63□□□□□ -1.51
GABRB3-226ENST00000638149 PPP1R12CQ9BZL4 782 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 SLC28A3Q9HAS3 691 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 HOXC10Q9NYD6 342 aa5.63□□□□□ -1.51
GABRB3-226ENST00000638149 BTBD7Q9P203 1132 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms