RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 GREB1LQ9C091 1923 aaPredicted RBP14.95□□□□□ -0.02
CLN6-225ENST00000638144 A0A1W2PRG0 241 aa14.94□□□□□ -0.02
CLN6-225ENST00000638144 RASA1P20936 1047 aa14.94□□□□□ -0.02
CLN6-225ENST00000638144 SP3Q02447 781 aa14.94□□□□□ -0.02
CLN6-225ENST00000638144 CTDSPL2Q05D32 466 aa14.94□□□□□ -0.02
CLN6-225ENST00000638144 PPARAQ07869 468 aa14.94□□□□□ -0.02
CLN6-225ENST00000638144 CTU1Q7Z7A3 348 aaKnown RBP14.94□□□□□ -0.02
CLN6-225ENST00000638144 PROCA1Q8NCQ7 364 aaPredicted RBP14.94□□□□□ -0.02
CLN6-225ENST00000638144 TBC1D2Q9BYX2 928 aa14.94□□□□□ -0.02
CLN6-225ENST00000638144 ZCCHC17Q9NP64 241 aaKnown RBP14.94□□□□□ -0.02
CLN6-225ENST00000638144 INCENPQ9NQS7 918 aa14.94□□□□□ -0.02
CLN6-225ENST00000638144 EMILIN3Q9NT22 766 aa14.94□□□□□ -0.02
CLN6-225ENST00000638144 GINM1Q9NU53 330 aa14.94□□□□□ -0.02
CLN6-225ENST00000638144 TMOD4Q9NZQ9 345 aa14.94□□□□□ -0.02
CLN6-225ENST00000638144 PEX10O60683 326 aa14.93□□□□□ -0.02
CLN6-225ENST00000638144 ATP2B2Q01814 1243 aa14.93□□□□□ -0.02
CLN6-225ENST00000638144 ICA1Q05084 483 aa14.93□□□□□ -0.02
CLN6-225ENST00000638144 NOM1Q5C9Z4 860 aaKnown RBP14.93□□□□□ -0.02
CLN6-225ENST00000638144 SH3D19Q5HYK7 790 aa14.93□□□□□ -0.02
CLN6-225ENST00000638144 TMEM179Q6ZVK1 233 aa14.93□□□□□ -0.02
CLN6-225ENST00000638144 MKNK2Q9HBH9 465 aa14.93□□□□□ -0.02
CLN6-225ENST00000638144 TACC3Q9Y6A5 838 aa14.93□□□□□ -0.02
CLN6-225ENST00000638144 MYH4Q9Y623 1939 aa14.92□□□□□ -0.02
CLN6-225ENST00000638144 HSPD1P10809 573 aaKnown RBP14.92□□□□□ -0.02
CLN6-225ENST00000638144 CTGFP29279 349 aa14.92□□□□□ -0.02
CLN6-225ENST00000638144 HAND2P61296 217 aa14.92□□□□□ -0.02
CLN6-225ENST00000638144 USP17L2Q6R6M4 530 aa14.92□□□□□ -0.02
CLN6-225ENST00000638144 C17orf99Q6UX52 265 aa14.92□□□□□ -0.02
CLN6-225ENST00000638144 SMCR8Q8TEV9 937 aaPredicted RBP14.92□□□□□ -0.02
CLN6-225ENST00000638144 ERO1AQ96HE7 468 aa14.92□□□□□ -0.02
CLN6-225ENST00000638144 ASCC2Q9H1I8 757 aaPredicted RBP14.92□□□□□ -0.02
CLN6-225ENST00000638144 TRIM17Q9Y577 477 aa14.92□□□□□ -0.02
CLN6-225ENST00000638144 MGAMO43451 1857 aa14.92□□□□□ -0.02
CLN6-225ENST00000638144 LAMA4Q16363 1823 aa14.92□□□□□ -0.02
CLN6-225ENST00000638144 C19orf81C9J6K1 198 aa14.91□□□□□ -0.02
CLN6-225ENST00000638144 VCAM1P19320 739 aa14.91□□□□□ -0.02
CLN6-225ENST00000638144 FAM47AQ5JRC9 791 aa14.91□□□□□ -0.02
CLN6-225ENST00000638144 KIAA1755Q5JYT7 1200 aa14.91□□□□□ -0.02
CLN6-225ENST00000638144 OTOP1Q7RTM1 612 aa14.91□□□□□ -0.02
CLN6-225ENST00000638144 SIAH1Q8IUQ4 282 aa14.91□□□□□ -0.02
CLN6-225ENST00000638144 SPICE1Q8N0Z3 855 aa14.91□□□□□ -0.02
CLN6-225ENST00000638144 ANKRD13CQ8N6S4 541 aa14.91□□□□□ -0.02
CLN6-225ENST00000638144 ABHD8Q96I13 439 aa14.91□□□□□ -0.02
CLN6-225ENST00000638144 CCDC17Q96LX7 622 aa14.91□□□□□ -0.02
CLN6-225ENST00000638144 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.91□□□□□ -0.02
CLN6-225ENST00000638144 KIAA1683Q9H0B3 1180 aa14.91□□□□□ -0.02
CLN6-225ENST00000638144 RAD21O60216 631 aa14.9□□□□□ -0.02
CLN6-225ENST00000638144 FGAP02671 866 aa14.9□□□□□ -0.02
CLN6-225ENST00000638144 BCRP11274 1271 aa14.9□□□□□ -0.02
CLN6-225ENST00000638144 EEF2P13639 858 aaKnown RBP14.9□□□□□ -0.02
CLN6-225ENST00000638144 IRX3P78415 501 aaPredicted RBP14.9□□□□□ -0.02
CLN6-225ENST00000638144 LACTBP83111 547 aaPredicted RBP14.9□□□□□ -0.02
CLN6-225ENST00000638144 SLC45A1Q9Y2W3 748 aa14.9□□□□□ -0.02
CLN6-225ENST00000638144 DOCK3Q8IZD9 2030 aa14.89□□□□□ -0.03
CLN6-225ENST00000638144 HIP1O00291 1037 aa14.89□□□□□ -0.03
CLN6-225ENST00000638144 OSBPP22059 807 aa14.89□□□□□ -0.03
CLN6-225ENST00000638144 CHMLP26374 656 aa14.89□□□□□ -0.03
CLN6-225ENST00000638144 USP14P54578 494 aa14.89□□□□□ -0.03
CLN6-225ENST00000638144 PABPC4Q13310 644 aaKnown RBP eCLIP14.89□□□□□ -0.03
CLN6-225ENST00000638144 P2RX7Q99572 595 aaKnown RBP14.89□□□□□ -0.03
CLN6-225ENST00000638144 NBPF3Q9H094 633 aa14.89□□□□□ -0.03
CLN6-225ENST00000638144 RPAP3Q9H6T3 665 aaPredicted RBP14.89□□□□□ -0.03
CLN6-225ENST00000638144 EFCC1Q9HA90 598 aa14.89□□□□□ -0.03
CLN6-225ENST00000638144 ARHGEF10LQ9HCE6 1279 aa14.89□□□□□ -0.03
CLN6-225ENST00000638144 PNMA3Q9UL41 463 aa14.89□□□□□ -0.03
CLN6-225ENST00000638144 CENPFP49454 3210 aa14.89□□□□□ -0.03
CLN6-225ENST00000638144 SLC3A2P08195 630 aaKnown RBP14.88□□□□□ -0.03
CLN6-225ENST00000638144 PDE4BQ07343 736 aa14.88□□□□□ -0.03
CLN6-225ENST00000638144 ALX1Q15699 326 aa14.88□□□□□ -0.03
CLN6-225ENST00000638144 RRP12Q5JTH9 1297 aaKnown RBP14.88□□□□□ -0.03
CLN6-225ENST00000638144 SAMD1Q6SPF0 538 aaPredicted RBP14.88□□□□□ -0.03
CLN6-225ENST00000638144 TICAM2Q86XR7 235 aa14.88□□□□□ -0.03
CLN6-225ENST00000638144 TBC1D10CQ8IV04 446 aa14.88□□□□□ -0.03
CLN6-225ENST00000638144 ZNF444Q8N0Y2 327 aaPredicted RBP14.88□□□□□ -0.03
CLN6-225ENST00000638144 CHMP4CQ96CF2 233 aa14.88□□□□□ -0.03
CLN6-225ENST00000638144 TRIM47Q96LD4 638 aa14.88□□□□□ -0.03
CLN6-225ENST00000638144 C12orf42Q96LP6 360 aa14.88□□□□□ -0.03
CLN6-225ENST00000638144 TOMM22Q9NS69 142 aa14.88□□□□□ -0.03
CLN6-225ENST00000638144 TAOK2Q9UL54 1235 aa14.88□□□□□ -0.03
CLN6-225ENST00000638144 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.88□□□□□ -0.037e-6■■■■■ 33.6
CLN6-225ENST00000638144 PARP14Q460N5 1801 aa14.87□□□□□ -0.03
CLN6-225ENST00000638144 NMT2O60551 498 aa14.87□□□□□ -0.03
CLN6-225ENST00000638144 TSPY3P0CV98 308 aa14.87□□□□□ -0.03
CLN6-225ENST00000638144 TSPY8P0CW00 308 aa14.87□□□□□ -0.03
CLN6-225ENST00000638144 HOXA7P31268 230 aaPredicted RBP14.87□□□□□ -0.03
CLN6-225ENST00000638144 PSMC4P43686 418 aa14.87□□□□□ -0.03
CLN6-225ENST00000638144 MFAP1P55081 439 aaKnown RBP14.87□□□□□ -0.03
CLN6-225ENST00000638144 HERVK_113P62684 666 aa14.87□□□□□ -0.03
CLN6-225ENST00000638144 TFAP4Q01664 338 aa14.87□□□□□ -0.03
CLN6-225ENST00000638144 KIF22Q14807 665 aa14.87□□□□□ -0.03
CLN6-225ENST00000638144 POTEEQ6S8J3 1075 aa14.87□□□□□ -0.03
CLN6-225ENST00000638144 LRRC47Q8N1G4 583 aaKnown RBP14.87□□□□□ -0.03
CLN6-225ENST00000638144 NKX2-3Q8TAU0 364 aa14.87□□□□□ -0.03
CLN6-225ENST00000638144 CEP95Q96GE4 821 aa14.87□□□□□ -0.03
CLN6-225ENST00000638144 PAGR1Q9BTK6 254 aa14.87□□□□□ -0.03
CLN6-225ENST00000638144 TANGO6Q9C0B7 1094 aa14.87□□□□□ -0.03
CLN6-225ENST00000638144 KANSL2Q9H9L4 492 aa14.87□□□□□ -0.03
CLN6-225ENST00000638144 TXNRD2Q9NNW7 524 aa14.87□□□□□ -0.03
CLN6-225ENST00000638144 RLFQ13129 1914 aa14.87□□□□□ -0.03
CLN6-225ENST00000638144 IGKV6D-41A0A0C4DH26 115 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms