RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 TFRCP02786 760 aaKnown RBP13.5□□□□□ -0.25
CAPN3-221ENST00000638141 TNFRSF8P28908 595 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 GBP2P32456 591 aaPredicted RBP13.5□□□□□ -0.25
CAPN3-221ENST00000638141 RPS6KA3P51812 740 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 NNTQ13423 1086 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 MCMDC2Q4G0Z9 681 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 CCDC70Q6NSX1 233 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 EMBQ6PCB8 327 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 CRELD2Q6UXH1 353 aaPredicted RBP13.5□□□□□ -0.25
CAPN3-221ENST00000638141 METTL16Q86W50 562 aaKnown RBP13.5□□□□□ -0.25
CAPN3-221ENST00000638141 CEP57Q86XR8 500 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 ATRIPQ8WXE1 791 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 C8orf76Q96K31 380 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 DSCC1Q9BVC3 393 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 EBF2Q9HAK2 575 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 CPSF2Q9P2I0 782 aaKnown RBP13.5□□□□□ -0.25
CAPN3-221ENST00000638141 DDX60Q8IY21 1712 aaKnown RBP13.5□□□□□ -0.25
CAPN3-221ENST00000638141 SEMA3EO15041 775 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 SASH1O94885 1247 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 ERCC5P28715 1186 aaPredicted RBP13.49□□□□□ -0.25
CAPN3-221ENST00000638141 PDIA3P30101 505 aaKnown RBP13.49□□□□□ -0.25
CAPN3-221ENST00000638141 ATP2B2Q01814 1243 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 PDE4BQ07343 736 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 PTGISQ16647 500 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 LACTB2Q53H82 288 aaPredicted RBP13.49□□□□□ -0.25
CAPN3-221ENST00000638141 RESP18Q5W5W9 173 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 APTXQ7Z2E3 356 aaKnown RBP13.49□□□□□ -0.25
CAPN3-221ENST00000638141 ORAI2Q96SN7 254 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 SAR1BQ9Y6B6 198 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 PPP1R37O75864 691 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 BMP6P22004 513 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 RBL2Q08999 1139 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 PDCLQ13371 301 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 PNOCQ13519 176 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 PTPN21Q16825 1174 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 TTMPQ5BVD1 217 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 CCDC102BQ68D86 513 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 ZNF572Q7Z3I7 529 aaPredicted RBP13.49□□□□□ -0.25
CAPN3-221ENST00000638141 CAVIN3Q969G5 261 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 CCDC114Q96M63 670 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 COL15A1P39059 1388 aa13.49□□□□□ -0.25
CAPN3-221ENST00000638141 ZNF609O15014 1411 aa13.48□□□□□ -0.25
CAPN3-221ENST00000638141 USP6P35125 1406 aa13.48□□□□□ -0.25
CAPN3-221ENST00000638141 ZMYM6O95789 1325 aa13.48□□□□□ -0.25
CAPN3-221ENST00000638141 C1orf167Q5SNV9 1468 aa13.48□□□□□ -0.25
CAPN3-221ENST00000638141 EME2A4GXA9 379 aaPredicted RBP13.48□□□□□ -0.25
CAPN3-221ENST00000638141 FDPSP14324 419 aaKnown RBP13.48□□□□□ -0.25
CAPN3-221ENST00000638141 MMGT1Q8N4V1 131 aa13.48□□□□□ -0.25
CAPN3-221ENST00000638141 MYCBPAPQ8TBZ2 947 aa13.48□□□□□ -0.25
CAPN3-221ENST00000638141 LMBR1Q8WVP7 490 aa13.48□□□□□ -0.25
CAPN3-221ENST00000638141 CCDC47Q96A33 483 aaKnown RBP13.48□□□□□ -0.25
CAPN3-221ENST00000638141 CTAGE1Q96RT6 745 aa13.48□□□□□ -0.25
CAPN3-221ENST00000638141 MMS19Q96T76 1030 aa13.48□□□□□ -0.25
CAPN3-221ENST00000638141 TMX4Q9H1E5 349 aaPredicted RBP13.48□□□□□ -0.25
CAPN3-221ENST00000638141 HAUS4Q9H6D7 363 aa13.48□□□□□ -0.25
CAPN3-221ENST00000638141 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.48□□□□□ -0.25
CAPN3-221ENST00000638141 PCDHA5Q9Y5H7 936 aa13.48□□□□□ -0.25
CAPN3-221ENST00000638141 PDHBP11177 359 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 ESCO1Q5FWF5 840 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 CYP26C1Q6V0L0 522 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.47□□□□□ -0.25
CAPN3-221ENST00000638141 CCDC121Q6ZUS5 278 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 NLRP14Q86W24 1093 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 EHBP1Q8NDI1 1231 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 KIF9Q9HAQ2 790 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 WDR17Q8IZU2 1322 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 ANO9A1A5B4 782 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 PI4KAP2A4QPH2 592 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 AHCYL1O43865 530 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 DNAJC8O75937 253 aaPredicted RBP13.47□□□□□ -0.25
CAPN3-221ENST00000638141 EPHB4P54760 987 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 MDM2Q00987 491 aaPredicted RBP13.47□□□□□ -0.25
CAPN3-221ENST00000638141 RNF187Q5TA31 235 aaPredicted RBP13.47□□□□□ -0.25
CAPN3-221ENST00000638141 CD302Q8IX05 232 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 PI4KAP1Q8N8J0 262 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 DRAXINQ8NBI3 349 aaPredicted RBP13.47□□□□□ -0.25
CAPN3-221ENST00000638141 CCHCR1Q8TD31 782 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 NECTIN2Q92692 538 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 SPDL1Q96EA4 605 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 CCT8L2Q96SF2 557 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 BOLA2Q9H3K6 86 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 PALLDQ8WX93 1383 aa13.47□□□□□ -0.25
CAPN3-221ENST00000638141 PLEKHG3A1L390 1219 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 FESP07332 822 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 GHRP10912 638 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 CDC27P30260 824 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 SARSP49591 514 aaKnown RBP13.46□□□□□ -0.25
CAPN3-221ENST00000638141 RIPK1Q13546 671 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 TRIM14Q14142 442 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 SHC4Q6S5L8 630 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 STOX1Q6ZVD7 989 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 FOXP4Q8IVH2 680 aaPredicted RBP13.46□□□□□ -0.25
CAPN3-221ENST00000638141 RASSF8Q8NHQ8 419 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 RUFY1Q96T51 708 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 PAIP2Q9BPZ3 127 aaKnown RBP13.46□□□□□ -0.25
CAPN3-221ENST00000638141 CENPHQ9H3R5 247 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 HELLSQ9NRZ9 838 aa13.46□□□□□ -0.25
CAPN3-221ENST00000638141 ADD3Q9UEY8 706 aaKnown RBP13.46□□□□□ -0.25
CAPN3-221ENST00000638141 CORO1CQ9ULV4 474 aaPredicted RBP13.46□□□□□ -0.25
CAPN3-221ENST00000638141 ERICH2A1L162 156 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms