RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 AMFRQ9UKV5 643 aa21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 TTC21BQ7Z4L5 1316 aa21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 A0A1B0GVL5 298 aa21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 SRGAP2BP0DMP2 458 aa21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 IL9RQ01113 521 aa21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 POGZQ7Z3K3 1410 aa21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 MYD88Q99836 296 aa21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 EIF2AK4Q9P2K8 1649 aaKnown RBP21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 SERPINB2P05120 415 aa21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 LRRC37BQ96QE4 947 aa21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 UPF3AQ9H1J1 476 aaKnown RBP21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 STX1BP61266 288 aa21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 LRRC8BQ6P9F7 803 aa21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 TRPC6Q9Y210 931 aa21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 TMEM232C9JQI7 657 aa21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 RINT1Q6NUQ1 792 aa21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 CAPS2Q9BXY5 557 aa21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 PACSIN2Q9UNF0 486 aaPredicted RBP21.26■□□□□ 0.99
CACNA1A-257ENST00000638009 MAP3K7O43318 606 aa21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 TMX3Q96JJ7 454 aa21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 NEUROG2Q9H2A3 272 aa21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 NSD2O96028 1365 aa21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 OAS2P29728 719 aaKnown RBP21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 SKOR1P84550 965 aa21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 ENAHQ8N8S7 591 aaPredicted RBP21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 PHKBQ93100 1093 aa21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 TTLL3Q9Y4R7 772 aa21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 KRT81Q14533 505 aa21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 KHDRBS2Q5VWX1 349 aaKnown RBP21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 LDHAL6AQ6ZMR3 332 aa21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 PRPSAP1Q14558 356 aa21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 CWF19L2Q2TBE0 894 aaKnown RBP21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 TYW5A2RUC4 315 aaKnown RBP21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 FLOT2Q14254 428 aa21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 RALGAPBQ86X10 1494 aa21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 NPR1P16066 1061 aa21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 IFIH1Q9BYX4 1025 aaKnown RBP21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 SAR1BQ9Y6B6 198 aa21.25■□□□□ 0.99
CACNA1A-257ENST00000638009 OATP04181 439 aa21.24■□□□□ 0.99
CACNA1A-257ENST00000638009 HDAC11Q96DB2 347 aa21.24■□□□□ 0.99
CACNA1A-257ENST00000638009 KIAA1107Q9UPP5 1409 aa21.24■□□□□ 0.99
CACNA1A-257ENST00000638009 MCF2P10911 925 aa21.24■□□□□ 0.99
CACNA1A-257ENST00000638009 TRIM50Q86XT4 487 aa21.24■□□□□ 0.99
CACNA1A-257ENST00000638009 TRIM8Q9BZR9 551 aa21.24■□□□□ 0.99
CACNA1A-257ENST00000638009 PSMD7P51665 324 aa21.24■□□□□ 0.99
CACNA1A-257ENST00000638009 MRPL40Q9NQ50 206 aaKnown RBP21.24■□□□□ 0.99
CACNA1A-257ENST00000638009 ZRANB2O95218 330 aaKnown RBP eCLIP21.24■□□□□ 0.99
CACNA1A-257ENST00000638009 ZNF622Q969S3 477 aaKnown RBP eCLIP21.24■□□□□ 0.99
CACNA1A-257ENST00000638009 ATP6V0A4Q9HBG4 840 aa21.24■□□□□ 0.99
CACNA1A-257ENST00000638009 CCDC51Q96ER9 411 aa21.23■□□□□ 0.99
CACNA1A-257ENST00000638009 SMARCA4P51532 1647 aa21.23■□□□□ 0.99
CACNA1A-257ENST00000638009 LPXNO60711 386 aa21.23■□□□□ 0.99
CACNA1A-257ENST00000638009 POMGNT1Q8WZA1 660 aa21.23■□□□□ 0.99
CACNA1A-257ENST00000638009 ABTB1Q969K4 478 aaPredicted RBP21.23■□□□□ 0.99
CACNA1A-257ENST00000638009 SCYL1Q96KG9 808 aa21.23■□□□□ 0.99
CACNA1A-257ENST00000638009 VPS37BQ9H9H4 285 aa21.23■□□□□ 0.99
CACNA1A-257ENST00000638009 HDAC4P56524 1084 aa21.23■□□□□ 0.99
CACNA1A-257ENST00000638009 CTNND2Q9UQB3 1225 aa21.23■□□□□ 0.99
CACNA1A-257ENST00000638009 NUTM2BA6NNL0 878 aaPredicted RBP21.23■□□□□ 0.99
CACNA1A-257ENST00000638009 NUTM2EB1AL46 878 aaPredicted RBP21.23■□□□□ 0.99
CACNA1A-257ENST00000638009 SCYL3Q8IZE3 742 aa21.23■□□□□ 0.99
CACNA1A-257ENST00000638009 SUFUQ9UMX1 484 aa21.22■□□□□ 0.99
CACNA1A-257ENST00000638009 NME8Q8N427 588 aa21.22■□□□□ 0.99
CACNA1A-257ENST00000638009 CCDC78A2IDD5 438 aa21.22■□□□□ 0.99
CACNA1A-257ENST00000638009 SYCE1LA8MT33 242 aa21.22■□□□□ 0.99
CACNA1A-257ENST00000638009 ATG16L1Q676U5 607 aa21.22■□□□□ 0.99
CACNA1A-257ENST00000638009 KRT10P13645 584 aa21.22■□□□□ 0.99
CACNA1A-257ENST00000638009 KIF14Q15058 1648 aa21.22■□□□□ 0.99
CACNA1A-257ENST00000638009 APOA1P02647 267 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 MGARPQ8TDB4 240 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 LLPHQ9BRT6 129 aaKnown RBP21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 ECE1P42892 770 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 SNX1Q13596 522 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 NCOA2Q15596 1464 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 TDRD9Q8NDG6 1382 aaKnown RBP21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 MRRFQ96E11 262 aaKnown RBP21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 MRFAP1L1Q96HT8 127 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 CLSTN2Q9H4D0 955 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 SUCLA2Q9P2R7 463 aaPredicted RBP21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 IQCB1Q15051 598 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 Q6ZUG5 572 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 TXNDC2Q86VQ3 553 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 CCHCR1Q8TD31 782 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 ANKRD35Q8N283 1001 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 MLKLQ8NB16 471 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 GSTA4O15217 222 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 FBXL13Q8NEE6 735 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 FGD4Q96M96 766 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 CNOT10Q9H9A5 744 aaKnown RBP21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 SFMBT2Q5VUG0 894 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 STX19Q8N4C7 294 aa21.21■□□□□ 0.99
CACNA1A-257ENST00000638009 CCDC8Q9H0W5 538 aaPredicted RBP21.2■□□□□ 0.98
CACNA1A-257ENST00000638009 PAK1Q13153 545 aa21.2■□□□□ 0.98
CACNA1A-257ENST00000638009 GLE1Q53GS7 698 aaKnown RBP21.2■□□□□ 0.98
CACNA1A-257ENST00000638009 OR9Q1Q8NGQ5 310 aa21.2■□□□□ 0.98
CACNA1A-257ENST00000638009 GSDMAQ96QA5 445 aa21.2■□□□□ 0.98
CACNA1A-257ENST00000638009 MRPL28Q13084 256 aaKnown RBP21.2■□□□□ 0.98
CACNA1A-257ENST00000638009 CCDC197Q8NCU1 140 aa21.2■□□□□ 0.98
CACNA1A-257ENST00000638009 M0QZ92 97 aa21.2■□□□□ 0.98
CACNA1A-257ENST00000638009 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms