RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 MKNK2Q9HBH9 465 aa19.06■□□□□ 0.64
CTSD-213ENST00000637915 COL11A2P13942 1736 aaPredicted RBP19.05■□□□□ 0.64
CTSD-213ENST00000637915 ZNF772Q68DY9 489 aaPredicted RBP19.05■□□□□ 0.64
CTSD-213ENST00000637915 DGKHQ86XP1 1220 aa19.05■□□□□ 0.64
CTSD-213ENST00000637915 CEP57L1Q8IYX8 460 aa19.05■□□□□ 0.64
CTSD-213ENST00000637915 FAM163AQ96GL9 167 aaPredicted RBP19.05■□□□□ 0.64
CTSD-213ENST00000637915 CABP5Q9NP86 173 aa19.05■□□□□ 0.64
CTSD-213ENST00000637915 SAP30BPQ9UHR5 308 aaKnown RBP19.05■□□□□ 0.64
CTSD-213ENST00000637915 PCDHB6Q9Y5E3 794 aa19.05■□□□□ 0.64
CTSD-213ENST00000637915 GAKO14976 1311 aa19.05■□□□□ 0.64
CTSD-213ENST00000637915 GOLGA6L19H0YKK7 550 aa19.04■□□□□ 0.64
CTSD-213ENST00000637915 KRT2P35908 639 aa19.04■□□□□ 0.64
CTSD-213ENST00000637915 DHX40Q8IX18 779 aaKnown RBP19.04■□□□□ 0.64
CTSD-213ENST00000637915 SLC44A5Q8NCS7 719 aa19.04■□□□□ 0.64
CTSD-213ENST00000637915 ANKS1AQ92625 1134 aa19.04■□□□□ 0.64
CTSD-213ENST00000637915 TTC12Q9H892 705 aaPredicted RBP19.04■□□□□ 0.64
CTSD-213ENST00000637915 KAT14Q9H8E8 782 aa19.04■□□□□ 0.64
CTSD-213ENST00000637915 FBXO2Q9UK22 296 aaPredicted RBP19.04■□□□□ 0.64
CTSD-213ENST00000637915 ZNF75DP51815 510 aa19.04■□□□□ 0.64
CTSD-213ENST00000637915 RHBDL3P58872 404 aa19.04■□□□□ 0.64
CTSD-213ENST00000637915 TEX11Q8IYF3 940 aa19.04■□□□□ 0.64
CTSD-213ENST00000637915 SPC24Q8NBT2 197 aa19.04■□□□□ 0.64
CTSD-213ENST00000637915 TRIM5Q9C035 493 aa19.04■□□□□ 0.64
CTSD-213ENST00000637915 FAM205CA6NFA0 338 aa19.03■□□□□ 0.64
CTSD-213ENST00000637915 TSPY3P0CV98 308 aa19.03■□□□□ 0.64
CTSD-213ENST00000637915 TSPY8P0CW00 308 aa19.03■□□□□ 0.64
CTSD-213ENST00000637915 NPR1P16066 1061 aa19.03■□□□□ 0.64
CTSD-213ENST00000637915 PLCG2P16885 1265 aa19.03■□□□□ 0.64
CTSD-213ENST00000637915 PTPREP23469 700 aa19.03■□□□□ 0.64
CTSD-213ENST00000637915 SLF2Q8IX21 1173 aa19.03■□□□□ 0.64
CTSD-213ENST00000637915 NAT10Q9H0A0 1025 aaKnown RBP19.03■□□□□ 0.64
CTSD-213ENST00000637915 TCP11L1Q9NUJ3 509 aa19.03■□□□□ 0.64
CTSD-213ENST00000637915 FOCADQ5VW36 1801 aa19.03■□□□□ 0.64
CTSD-213ENST00000637915 FLT1P17948 1338 aa19.03■□□□□ 0.64
CTSD-213ENST00000637915 USP17L3A6NCW0 530 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 USP17L4A6NCW7 530 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 RIMBP2O15034 1052 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 KIF5BP33176 963 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 GTF2IP78347 998 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 NPY5RQ15761 445 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 DPCR1Q3MIW9 517 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 EARS2Q5JPH6 523 aaKnown RBP19.02■□□□□ 0.64
CTSD-213ENST00000637915 SARM1Q6SZW1 724 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 USP17L1Q7RTZ2 530 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 PNMA1Q8ND90 353 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 FBXW7Q969H0 707 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 COA1Q9GZY4 146 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 BECN2A8MW95 431 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 GOLGA6L6A8MZA4 724 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 RASA1P20936 1047 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 GRIN1Q05586 938 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 KIAA2012Q0VF49 1180 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 ZRSR1Q15695 479 aaKnown RBP19.02■□□□□ 0.64
CTSD-213ENST00000637915 CCDC178Q5BJE1 867 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 OLFM4Q6UX06 510 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 ZNF444Q8N0Y2 327 aaPredicted RBP19.02■□□□□ 0.64
CTSD-213ENST00000637915 FLAD1Q8NFF5 587 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 TNFRSF25Q93038 417 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 KCNH3Q9ULD8 1083 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 CEP131Q9UPN4 1083 aa19.02■□□□□ 0.64
CTSD-213ENST00000637915 SNED1Q8TER0 1413 aa19.02■□□□□ 0.63
CTSD-213ENST00000637915 MYH1P12882 1939 aa19.01■□□□□ 0.63
CTSD-213ENST00000637915 OFD1O75665 1012 aa19.01■□□□□ 0.63
CTSD-213ENST00000637915 MMP10P09238 476 aa19.01■□□□□ 0.63
CTSD-213ENST00000637915 SCG2P13521 617 aa19.01■□□□□ 0.63
CTSD-213ENST00000637915 ATP2B1P20020 1258 aa19.01■□□□□ 0.63
CTSD-213ENST00000637915 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.01■□□□□ 0.63
CTSD-213ENST00000637915 BRMS1Q9HCU9 246 aa19.01■□□□□ 0.63
CTSD-213ENST00000637915 QSER1Q2KHR3 1735 aa19.01■□□□□ 0.63
CTSD-213ENST00000637915 TPM3P06753 285 aa19.01■□□□□ 0.63
CTSD-213ENST00000637915 PDE6BP35913 854 aa19.01■□□□□ 0.63
CTSD-213ENST00000637915 NLRP12P59046 1061 aa19.01■□□□□ 0.63
CTSD-213ENST00000637915 PFKFB3Q16875 520 aaPredicted RBP19.01■□□□□ 0.63
CTSD-213ENST00000637915 LONRF3Q496Y0 759 aa19.01■□□□□ 0.63
CTSD-213ENST00000637915 SPECC1Q5M775 1068 aa19.01■□□□□ 0.63
CTSD-213ENST00000637915 C16orf86Q6ZW13 317 aa19.01■□□□□ 0.63
CTSD-213ENST00000637915 AOPEPQ8N6M6 819 aa19.01■□□□□ 0.63
CTSD-213ENST00000637915 ZNF287Q9HBT7 754 aa19.01■□□□□ 0.63
CTSD-213ENST00000637915 DAGLAQ9Y4D2 1042 aa19.01■□□□□ 0.63
CTSD-213ENST00000637915 SRPRBQ9Y5M8 271 aaKnown RBP19.01■□□□□ 0.63
CTSD-213ENST00000637915 BIN1O00499 593 aa19■□□□□ 0.63
CTSD-213ENST00000637915 ALDH1B1P30837 517 aa19■□□□□ 0.63
CTSD-213ENST00000637915 KRBA2Q6ZNG9 492 aa19■□□□□ 0.63
CTSD-213ENST00000637915 ZNF579Q8NAF0 562 aaKnown RBP19■□□□□ 0.63
CTSD-213ENST00000637915 BPIFA3Q9BQP9 254 aa19■□□□□ 0.63
CTSD-213ENST00000637915 KCNF1Q9H3M0 494 aa19■□□□□ 0.63
CTSD-213ENST00000637915 TUBE1Q9UJT0 475 aa19■□□□□ 0.63
CTSD-213ENST00000637915 PARP3Q9Y6F1 533 aa19■□□□□ 0.63
CTSD-213ENST00000637915 MORC2Q9Y6X9 1032 aaPredicted RBP19■□□□□ 0.63
CTSD-213ENST00000637915 TNS1Q9HBL0 1735 aaKnown RBP19■□□□□ 0.63
CTSD-213ENST00000637915 TRIM75PA6NK02 468 aa18.99■□□□□ 0.63
CTSD-213ENST00000637915 VEGFAP15692 232 aaPredicted RBP18.99■□□□□ 0.63
CTSD-213ENST00000637915 CDK8P49336 464 aa18.99■□□□□ 0.63
CTSD-213ENST00000637915 GRM4Q14833 912 aa18.99■□□□□ 0.63
CTSD-213ENST00000637915 STAG2Q8N3U4 1231 aa18.99■□□□□ 0.63
CTSD-213ENST00000637915 ZC3H12CQ9C0D7 883 aaKnown RBP18.99■□□□□ 0.63
CTSD-213ENST00000637915 METTL16Q86W50 562 aaKnown RBP18.99■□□□□ 0.63
CTSD-213ENST00000637915 PIBF1Q8WXW3 757 aa18.99■□□□□ 0.63
CTSD-213ENST00000637915 MAD2L2Q9UI95 211 aa18.99■□□□□ 0.63
CTSD-213ENST00000637915 SUGT1Q9Y2Z0 365 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms