RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 CACNB2Q08289 660 aaPredicted RBP22.19■■□□□ 1.14
CTSD-209ENST00000637158 SHROOM1Q2M3G4 852 aaPredicted RBP22.19■■□□□ 1.14
CTSD-209ENST00000637158 EDC3Q96F86 508 aaKnown RBP22.19■■□□□ 1.14
CTSD-209ENST00000637158 TLR7Q9NYK1 1049 aaKnown RBP22.19■■□□□ 1.14
CTSD-209ENST00000637158 ZMYND8Q9ULU4 1186 aaPredicted RBP22.19■■□□□ 1.14
CTSD-209ENST00000637158 PLXNB2O15031 1838 aa22.18■■□□□ 1.14
CTSD-209ENST00000637158 PEX10O60683 326 aa22.18■■□□□ 1.14
CTSD-209ENST00000637158 RAB3GAP1Q15042 981 aa22.18■■□□□ 1.14
CTSD-209ENST00000637158 ABCB5Q2M3G0 1257 aa22.18■■□□□ 1.14
CTSD-209ENST00000637158 CATSPERGQ6ZRH7 1159 aa22.18■■□□□ 1.14
CTSD-209ENST00000637158 KIAA1683Q9H0B3 1180 aa22.18■■□□□ 1.14
CTSD-209ENST00000637158 CDK5RAP2Q96SN8 1893 aa22.17■■□□□ 1.14
CTSD-209ENST00000637158 SOX1O00570 391 aaPredicted RBP22.17■■□□□ 1.14
CTSD-209ENST00000637158 MAP2K5Q13163 448 aa22.17■■□□□ 1.14
CTSD-209ENST00000637158 TTF1Q15361 905 aaPredicted RBP22.17■■□□□ 1.14
CTSD-209ENST00000637158 LRIT3Q3SXY7 679 aa22.17■■□□□ 1.14
CTSD-209ENST00000637158 LBX2Q6XYB7 198 aa22.17■■□□□ 1.14
CTSD-209ENST00000637158 SLC17A8Q8NDX2 589 aa22.17■■□□□ 1.14
CTSD-209ENST00000637158 LRCH3Q96II8 777 aa22.17■■□□□ 1.14
CTSD-209ENST00000637158 A0A0C4DFX4 3053 aa22.17■■□□□ 1.14
CTSD-209ENST00000637158 COL6A1P12109 1028 aa22.16■■□□□ 1.14
CTSD-209ENST00000637158 HSP90AB4PQ58FF6 505 aa22.16■■□□□ 1.14
CTSD-209ENST00000637158 MFSD14CQ5VZR4 134 aa22.16■■□□□ 1.14
CTSD-209ENST00000637158 LHX8Q68G74 356 aa22.16■■□□□ 1.14
CTSD-209ENST00000637158 IVNS1ABPQ9Y6Y0 642 aa22.16■■□□□ 1.14
CTSD-209ENST00000637158 ALPK3Q96L96 1907 aa22.16■■□□□ 1.14
CTSD-209ENST00000637158 DDX60LQ5H9U9 1706 aaKnown RBP22.15■■□□□ 1.14
CTSD-209ENST00000637158 SLC15A5A6NIM6 579 aa22.15■■□□□ 1.14
CTSD-209ENST00000637158 MSCO60682 206 aa22.15■■□□□ 1.14
CTSD-209ENST00000637158 ZYXQ15942 572 aaKnown RBP22.15■■□□□ 1.14
CTSD-209ENST00000637158 TDHQ8IZJ6 230 aa22.15■■□□□ 1.14
CTSD-209ENST00000637158 PFASO15067 1338 aa22.14■■□□□ 1.14
CTSD-209ENST00000637158 SYN1P17600 705 aa22.14■■□□□ 1.13
CTSD-209ENST00000637158 VCAM1P19320 739 aa22.14■■□□□ 1.13
CTSD-209ENST00000637158 PTPREP23469 700 aa22.14■■□□□ 1.13
CTSD-209ENST00000637158 CCND3P30281 292 aaPredicted RBP22.14■■□□□ 1.13
CTSD-209ENST00000637158 MAGEA10P43363 369 aaPredicted RBP22.14■■□□□ 1.13
CTSD-209ENST00000637158 CCL14Q16627 93 aa22.14■■□□□ 1.13
CTSD-209ENST00000637158 CEP85Q6P2H3 762 aa22.14■■□□□ 1.13
CTSD-209ENST00000637158 POTEEQ6S8J3 1075 aa22.14■■□□□ 1.13
CTSD-209ENST00000637158 AACSQ86V21 672 aa22.14■■□□□ 1.13
CTSD-209ENST00000637158 MYH1P12882 1939 aa22.14■■□□□ 1.13
CTSD-209ENST00000637158 MYO5AQ9Y4I1 1855 aaKnown RBP22.13■■□□□ 1.13
CTSD-209ENST00000637158 MAGEB6P1A0A0J9YX57 407 aa22.13■■□□□ 1.13
CTSD-209ENST00000637158 CNMDO75829 334 aa22.13■■□□□ 1.13
CTSD-209ENST00000637158 POLR3DP05423 398 aaPredicted RBP22.13■■□□□ 1.13
CTSD-209ENST00000637158 WDR78Q5VTH9 848 aa22.13■■□□□ 1.13
CTSD-209ENST00000637158 UBE2OQ9C0C9 1292 aaKnown RBP22.13■■□□□ 1.13
CTSD-209ENST00000637158 ANTXR1Q9H6X2 564 aa22.13■■□□□ 1.13
CTSD-209ENST00000637158 DNAH12Q6ZR08 3092 aa22.12■■□□□ 1.13
CTSD-209ENST00000637158 HOXC6P09630 235 aa22.12■■□□□ 1.13
CTSD-209ENST00000637158 ATP2B2Q01814 1243 aa22.12■■□□□ 1.13
CTSD-209ENST00000637158 RIOK1Q9BRS2 568 aaKnown RBP22.12■■□□□ 1.13
CTSD-209ENST00000637158 CRNKL1Q9BZJ0 848 aaKnown RBP22.12■■□□□ 1.13
CTSD-209ENST00000637158 HOXC10Q9NYD6 342 aa22.12■■□□□ 1.13
CTSD-209ENST00000637158 RLBP1P12271 317 aa22.11■■□□□ 1.13
CTSD-209ENST00000637158 SHMT1P34896 483 aa22.11■■□□□ 1.13
CTSD-209ENST00000637158 PLCD1P51178 756 aa22.11■■□□□ 1.13
CTSD-209ENST00000637158 GRB14Q14449 540 aa22.11■■□□□ 1.13
CTSD-209ENST00000637158 ACER1Q8TDN7 264 aa22.11■■□□□ 1.13
CTSD-209ENST00000637158 RPAP3Q9H6T3 665 aaPredicted RBP22.11■■□□□ 1.13
CTSD-209ENST00000637158 EXOC6BQ9Y2D4 811 aa22.11■■□□□ 1.13
CTSD-209ENST00000637158 NDUFB9Q9Y6M9 179 aa22.11■■□□□ 1.13
CTSD-209ENST00000637158 STRNO43815 780 aa22.1■■□□□ 1.13
CTSD-209ENST00000637158 COG2Q14746 738 aa22.1■■□□□ 1.13
CTSD-209ENST00000637158 SLC9C2Q5TAH2 1124 aa22.1■■□□□ 1.13
CTSD-209ENST00000637158 DEFB123Q8N688 67 aa22.1■■□□□ 1.13
CTSD-209ENST00000637158 SPDYE16A6NNV3 312 aaPredicted RBP22.09■■□□□ 1.13
CTSD-209ENST00000637158 MS4A1P11836 297 aa22.09■■□□□ 1.13
CTSD-209ENST00000637158 HNRNPUQ00839 825 aaKnown RBP eCLIP22.09■■□□□ 1.13
CTSD-209ENST00000637158 GABPAQ06546 454 aa22.09■■□□□ 1.13
CTSD-209ENST00000637158 LRRC26Q2I0M4 334 aa22.09■■□□□ 1.13
CTSD-209ENST00000637158 CLASRPQ8N2M8 674 aaKnown RBP22.09■■□□□ 1.13
CTSD-209ENST00000637158 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.09■■□□□ 1.13
CTSD-209ENST00000637158 LPAR1Q92633 364 aa22.09■■□□□ 1.13
CTSD-209ENST00000637158 MCM9Q9NXL9 1143 aa22.09■■□□□ 1.13
CTSD-209ENST00000637158 BTBD7Q9P203 1132 aa22.09■■□□□ 1.13
CTSD-209ENST00000637158 DDX20Q9UHI6 824 aaKnown RBP22.09■■□□□ 1.13
CTSD-209ENST00000637158 MPHOSPH10O00566 681 aaKnown RBP22.08■■□□□ 1.13
CTSD-209ENST00000637158 CNGA1P29973 690 aa22.08■■□□□ 1.13
CTSD-209ENST00000637158 RHPN1Q8TCX5 695 aa22.08■■□□□ 1.13
CTSD-209ENST00000637158 DLL1O00548 723 aa22.07■■□□□ 1.12
CTSD-209ENST00000637158 GUCY1A2P33402 732 aa22.07■■□□□ 1.12
CTSD-209ENST00000637158 SEPT2Q15019 361 aa22.07■■□□□ 1.12
CTSD-209ENST00000637158 DPP9Q86TI2 863 aa22.07■■□□□ 1.12
CTSD-209ENST00000637158 MB21D1Q8N884 522 aa22.07■■□□□ 1.12
CTSD-209ENST00000637158 SENP6Q9GZR1 1112 aaPredicted RBP22.07■■□□□ 1.12
CTSD-209ENST00000637158 SLC5A4Q9NY91 659 aa22.07■■□□□ 1.12
CTSD-209ENST00000637158 FLRT1Q9NZU1 646 aa22.07■■□□□ 1.12
CTSD-209ENST00000637158 SWAP70Q9UH65 585 aa22.07■■□□□ 1.12
CTSD-209ENST00000637158 DNM1LO00429 736 aa22.06■■□□□ 1.12
CTSD-209ENST00000637158 PDE6AP16499 860 aa22.06■■□□□ 1.12
CTSD-209ENST00000637158 TMEM179Q6ZVK1 233 aa22.06■■□□□ 1.12
CTSD-209ENST00000637158 SHCBP1Q8NEM2 672 aa22.06■■□□□ 1.12
CTSD-209ENST00000637158 KIF1BPQ96EK5 621 aa22.06■■□□□ 1.12
CTSD-209ENST00000637158 LBHD1Q9BQE6 289 aaPredicted RBP22.06■■□□□ 1.12
CTSD-209ENST00000637158 IL1RAPL2Q9NP60 686 aa22.06■■□□□ 1.12
CTSD-209ENST00000637158 IFIT2P09913 472 aaKnown RBP22.05■■□□□ 1.12
CTSD-209ENST00000637158 OLFML2BQ68BL8 750 aa22.05■■□□□ 1.12
CTSD-209ENST00000637158 RPAP2Q8IXW5 612 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms