RNA–Protein interactions for RNA: ENST00000636048.1

ARHGEF9-222, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5 BASIC

Gene ARHGEF9, Length 5,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-222	ENST00000636048	PLCD1	P51178	756 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	TRMT1L	Q7Z2T5	733 aa	Known RBP	10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	ACRBP	Q8NEB7	543 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	NOC4L	Q9BVI4	516 aa	Known RBP	10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	STX8	Q9UNK0	236 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	TMEM232	C9JQI7	657 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	HOXC9	P31274	260 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	GCK	P35557	465 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	IFIT1B	Q5T764	474 aa	Known RBP	10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	FUCA2	Q9BTY2	467 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	IMPG2	Q9BZV3	1241 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	EPN1	Q9Y6I3	576 aa	Predicted RBP	10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	FRMD3	A2A2Y4	597 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	HSPD1	P10809	573 aa	Known RBP	10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	PLA2G4A	P47712	749 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	GUCY2F	P51841	1108 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	EIF4A1	P60842	406 aa	Known RBP	10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	MRPS9	P82933	396 aa	Known RBP	10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	IL17RE	Q8NFR9	667 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	ESR2	Q92731	530 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	LRRC59	Q96AG4	307 aa	Known RBP	10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	TMEM87B	Q96K49	555 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	SYNC	Q9H7C4	482 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	CPSF1	Q10570	1443 aa	Known RBP	10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	VIM	P08670	466 aa	Known RBP	10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	MUM1L1	Q5H9M0	696 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	SPATA1	Q5VX52	437 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	NCAPH2	Q6IBW4	605 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	ZNF354C	Q86Y25	554 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	NELFB	Q8WX92	580 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	PLVAP	Q9BX97	442 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	SLC4A4	Q9Y6R1	1079 aa		10.16	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	GPAA1	O43292	621 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	TSPY3	P0CV98	308 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	TSPY8	P0CW00	308 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	CCDC6	Q16204	474 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	TRIML1	Q8N9V2	468 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	WDR24	Q96S15	920 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	BLZF1	Q9H2G9	400 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	LAMC1	P11047	1609 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	DEXI	O95424	95 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	CHRNA2	Q15822	529 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	CSGALNACT2	Q8N6G5	542 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	DDX12P	Q92771	950 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	FHOD1	Q9Y613	1164 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	SBNO1	A3KN83	1393 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	IFT88	Q13099	833 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	NEDD9	Q14511	834 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	SH2D4A	Q9H788	454 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	SAMSN1	Q9NSI8	373 aa	Known RBP	10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	ODF2L	Q9ULJ1	636 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	NOD1	Q9Y239	953 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	MRFAP1	Q9Y605	127 aa		10.15	□□□□□ -0.78
ARHGEF9-222	ENST00000636048	MAGEA1	P43355	309 aa		10.15	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	LACTB	P83111	547 aa	Predicted RBP	10.15	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	POLA2	Q14181	598 aa		10.15	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	RUFY4	Q6ZNE9	571 aa		10.15	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	MICAL1	Q8TDZ2	1067 aa		10.15	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	APPBP2	Q92624	585 aa		10.15	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	HOOK2	Q96ED9	719 aa		10.15	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	PSMD1	Q99460	953 aa		10.15	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	NCAPG	Q9BPX3	1015 aa		10.15	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	TCHP	Q9BT92	498 aa		10.15	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	C6orf50	Q9HD87	102 aa		10.15	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	MYO1A	Q9UBC5	1043 aa		10.15	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	FAM169A	Q9Y6X4	670 aa		10.15	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	MADD	Q8WXG6	1647 aa		10.15	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	CFAP221	Q4G0U5	840 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	NOSTRIN	Q8IVI9	506 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	KLHL7	Q8IXQ5	586 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	IFIH1	Q9BYX4	1025 aa	Known RBP	10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	KCNJ18	B7U540	433 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	H2AFX	P16104	143 aa	Predicted RBP	10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	GCKR	Q14397	625 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	KCNJ12	Q14500	433 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	PLS1	Q14651	629 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	PPP2R5A	Q15172	486 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	SNCB	Q16143	134 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	NOX5	Q96PH1	765 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	IL25	Q9H293	177 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	SWAP70	Q9UH65	585 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	IQGAP3	Q86VI3	1631 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	ARHGEF10	O15013	1369 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	TNR	Q92752	1358 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	FBF1	Q8TES7	1133 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	NUP58	Q9BVL2	599 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	RIPOR2	Q9Y4F9	1068 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	RNMT	O43148	476 aa	Known RBP	10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	KRT13	P13646	458 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	PEX19	P40855	299 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	E2F5	Q15329	346 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	RBM26	Q5T8P6	1007 aa	Known RBP	10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	TRIM58	Q8NG06	486 aa		10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	SREK1	Q8WXA9	508 aa	Known RBP	10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	METTL22	Q9BUU2	404 aa	Predicted RBP	10.14	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	KCNQ3	O43525	872 aa		10.13	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	CACNA2D3	Q8IZS8	1091 aa		10.13	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	ACSBG1	Q96GR2	724 aa		10.13	□□□□□ -0.79
ARHGEF9-222	ENST00000636048	PAIP2	Q9BPZ3	127 aa	Known RBP	10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms