RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 CYP2D6P10635 497 aa17.99■□□□□ 0.47
CLN8-209ENST00000635970 PSMA5P28066 241 aa17.99■□□□□ 0.47
CLN8-209ENST00000635970 ANKRD1Q15327 319 aa17.99■□□□□ 0.47
CLN8-209ENST00000635970 MCMDC2Q4G0Z9 681 aa17.99■□□□□ 0.47
CLN8-209ENST00000635970 ARMC9Q7Z3E5 817 aa17.99■□□□□ 0.47
CLN8-209ENST00000635970 ALDH8A1Q9H2A2 487 aaPredicted RBP17.99■□□□□ 0.47
CLN8-209ENST00000635970 DOCK1Q14185 1865 aa17.99■□□□□ 0.47
CLN8-209ENST00000635970 CYP2D7A0A087X1C5 515 aa17.99■□□□□ 0.47
CLN8-209ENST00000635970 FOXP2O15409 715 aa17.99■□□□□ 0.47
CLN8-209ENST00000635970 PLCD1P51178 756 aa17.99■□□□□ 0.47
CLN8-209ENST00000635970 DCAF15Q66K64 600 aa17.99■□□□□ 0.47
CLN8-209ENST00000635970 GIMAP6Q6P9H5 292 aa17.99■□□□□ 0.47
CLN8-209ENST00000635970 DHX36Q9H2U1 1008 aaKnown RBP17.99■□□□□ 0.47
CLN8-209ENST00000635970 DNAJC18Q9H819 358 aa17.99■□□□□ 0.47
CLN8-209ENST00000635970 ATP8A2Q9NTI2 1148 aa17.99■□□□□ 0.47
CLN8-209ENST00000635970 DNM1Q05193 864 aaKnown RBP17.98■□□□□ 0.47
CLN8-209ENST00000635970 GRM1Q13255 1194 aa17.98■□□□□ 0.47
CLN8-209ENST00000635970 MAP3K11Q16584 847 aa17.98■□□□□ 0.47
CLN8-209ENST00000635970 PAXIP1Q6ZW49 1069 aaPredicted RBP17.98■□□□□ 0.47
CLN8-209ENST00000635970 TICAM2Q86XR7 235 aa17.98■□□□□ 0.47
CLN8-209ENST00000635970 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.98■□□□□ 0.47
CLN8-209ENST00000635970 KLRG1Q96E93 195 aa17.98■□□□□ 0.47
CLN8-209ENST00000635970 CLMNQ96JQ2 1002 aa17.98■□□□□ 0.47
CLN8-209ENST00000635970 WRNIP1Q96S55 665 aa17.98■□□□□ 0.47
CLN8-209ENST00000635970 RASSF10A6NK89 507 aa17.97■□□□□ 0.47
CLN8-209ENST00000635970 CAVIN2O95810 425 aa17.97■□□□□ 0.47
CLN8-209ENST00000635970 APPP05067 770 aa17.97■□□□□ 0.47
CLN8-209ENST00000635970 IREB2P48200 963 aaKnown RBP17.97■□□□□ 0.47
CLN8-209ENST00000635970 NECTIN1Q15223 517 aa17.97■□□□□ 0.47
CLN8-209ENST00000635970 SYCP1Q15431 976 aa17.97■□□□□ 0.47
CLN8-209ENST00000635970 CYP4F22Q6NT55 531 aa17.97■□□□□ 0.47
CLN8-209ENST00000635970 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.97■□□□□ 0.47
CLN8-209ENST00000635970 CCDC83Q8IWF9 413 aa17.97■□□□□ 0.47
CLN8-209ENST00000635970 ZNF710Q8N1W2 664 aa17.97■□□□□ 0.47
CLN8-209ENST00000635970 HOOK2Q96ED9 719 aa17.97■□□□□ 0.47
CLN8-209ENST00000635970 ZNF341Q9BYN7 854 aa17.97■□□□□ 0.47
CLN8-209ENST00000635970 GTPBP4Q9BZE4 634 aaKnown RBP17.97■□□□□ 0.47
CLN8-209ENST00000635970 SCAND2PQ9GZW5 306 aaPredicted RBP17.97■□□□□ 0.47
CLN8-209ENST00000635970 PI4KBQ9UBF8 816 aa17.97■□□□□ 0.47
CLN8-209ENST00000635970 POLR3DP05423 398 aaPredicted RBP17.97■□□□□ 0.47
CLN8-209ENST00000635970 HLA-DOAP06340 250 aa17.97■□□□□ 0.47
CLN8-209ENST00000635970 GNAT2P19087 354 aa17.97■□□□□ 0.47
CLN8-209ENST00000635970 INPP5BP32019 993 aa17.97■□□□□ 0.47
CLN8-209ENST00000635970 DMTNQ08495 405 aa17.97■□□□□ 0.47
CLN8-209ENST00000635970 ZKSCAN4Q969J2 545 aaPredicted RBP17.97■□□□□ 0.47
CLN8-209ENST00000635970 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.97■□□□□ 0.473e-6■■■■■ 29.3
CLN8-209ENST00000635970 USP17L12C9JPN9 530 aa17.96■□□□□ 0.47
CLN8-209ENST00000635970 USP17L21D6R901 530 aa17.96■□□□□ 0.47
CLN8-209ENST00000635970 VGLL4Q14135 290 aa17.96■□□□□ 0.47
CLN8-209ENST00000635970 DEFB115Q30KQ5 88 aa17.96■□□□□ 0.47
CLN8-209ENST00000635970 LDLRAD1Q5T700 205 aa17.96■□□□□ 0.47
CLN8-209ENST00000635970 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.96■□□□□ 0.47
CLN8-209ENST00000635970 JAKMIP1Q96N16 626 aaKnown RBP17.96■□□□□ 0.47
CLN8-209ENST00000635970 PATL2C9JE40 543 aaKnown RBP17.95■□□□□ 0.46
CLN8-209ENST00000635970 CTIFO43310 598 aaKnown RBP17.95■□□□□ 0.46
CLN8-209ENST00000635970 TDO2P48775 406 aa17.95■□□□□ 0.46
CLN8-209ENST00000635970 MAP3K10Q02779 954 aa17.95■□□□□ 0.46
CLN8-209ENST00000635970 CTR9Q6PD62 1173 aa17.95■□□□□ 0.46
CLN8-209ENST00000635970 IFNL3Q8IZI9 196 aa17.95■□□□□ 0.46
CLN8-209ENST00000635970 CRACR2BQ8N4Y2 399 aaPredicted RBP17.95■□□□□ 0.46
CLN8-209ENST00000635970 NUP62CLQ9H1M0 184 aa17.95■□□□□ 0.46
CLN8-209ENST00000635970 DDX19AQ9NUU7 478 aaKnown RBP17.95■□□□□ 0.46
CLN8-209ENST00000635970 PHF20L1A8MW92 1017 aa17.95■□□□□ 0.46
CLN8-209ENST00000635970 ZNF157P51786 506 aaPredicted RBP17.95■□□□□ 0.46
CLN8-209ENST00000635970 RRP1BQ14684 758 aaKnown RBP17.95■□□□□ 0.46
CLN8-209ENST00000635970 LARP1BQ659C4 914 aaKnown RBP17.95■□□□□ 0.46
CLN8-209ENST00000635970 RGMBQ6NW40 437 aa17.95■□□□□ 0.46
CLN8-209ENST00000635970 ANKRD13AQ8IZ07 590 aa17.95■□□□□ 0.46
CLN8-209ENST00000635970 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.95■□□□□ 0.46
CLN8-209ENST00000635970 LAMA4Q16363 1823 aa17.95■□□□□ 0.46
CLN8-209ENST00000635970 PHIPQ8WWQ0 1821 aa17.94■□□□□ 0.46
CLN8-209ENST00000635970 TBC1D12O60347 775 aa17.94■□□□□ 0.46
CLN8-209ENST00000635970 MAP3K9P80192 1104 aa17.94■□□□□ 0.46
CLN8-209ENST00000635970 RNF20Q5VTR2 975 aa17.94■□□□□ 0.46
CLN8-209ENST00000635970 TTC6Q86TZ1 520 aa17.94■□□□□ 0.46
CLN8-209ENST00000635970 SLC44A5Q8NCS7 719 aa17.94■□□□□ 0.46
CLN8-209ENST00000635970 ANKRD7Q92527 254 aa17.94■□□□□ 0.46
CLN8-209ENST00000635970 DYNLL2Q96FJ2 89 aa17.94■□□□□ 0.46
CLN8-209ENST00000635970 KCNF1Q9H3M0 494 aa17.94■□□□□ 0.46
CLN8-209ENST00000635970 ELP3Q9H9T3 547 aa17.94■□□□□ 0.46
CLN8-209ENST00000635970 HERC5Q9UII4 1024 aaKnown RBP17.94■□□□□ 0.46
CLN8-209ENST00000635970 SERPINB13Q9UIV8 391 aa17.94■□□□□ 0.46
CLN8-209ENST00000635970 ZNF112Q9UJU3 913 aa17.94■□□□□ 0.46
CLN8-209ENST00000635970 HSPD1P10809 573 aaKnown RBP17.93■□□□□ 0.46
CLN8-209ENST00000635970 PLCB2Q00722 1185 aa17.93■□□□□ 0.46
CLN8-209ENST00000635970 SHROOM1Q2M3G4 852 aaPredicted RBP17.93■□□□□ 0.46
CLN8-209ENST00000635970 C12orf60Q5U649 245 aa17.93■□□□□ 0.46
CLN8-209ENST00000635970 RBM43Q6ZSC3 357 aaKnown RBP17.93■□□□□ 0.46
CLN8-209ENST00000635970 METTL16Q86W50 562 aaKnown RBP17.93■□□□□ 0.46
CLN8-209ENST00000635970 RASAL3Q86YV0 1011 aa17.93■□□□□ 0.46
CLN8-209ENST00000635970 CNKSR2Q8WXI2 1034 aa17.93■□□□□ 0.46
CLN8-209ENST00000635970 HHIPL1Q96JK4 782 aa17.93■□□□□ 0.46
CLN8-209ENST00000635970 TRIM34Q9BYJ4 488 aa17.93■□□□□ 0.46
CLN8-209ENST00000635970 EHD4Q9H223 541 aa17.93■□□□□ 0.46
CLN8-209ENST00000635970 ARPP21Q9UBL0 812 aaPredicted RBP17.93■□□□□ 0.46
CLN8-209ENST00000635970 SNCAIPQ9Y6H5 919 aa17.93■□□□□ 0.46
CLN8-209ENST00000635970 THSD7BQ9C0I4 1608 aa17.93■□□□□ 0.46
CLN8-209ENST00000635970 MINDY4BA8MYZ0 360 aa17.93■□□□□ 0.46
CLN8-209ENST00000635970 LARGE1O95461 756 aa17.93■□□□□ 0.46
CLN8-209ENST00000635970 VEGFBP49765 207 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms