RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 Q6ZUG5 572 aa23.24■■□□□ 1.31
CLN8-208ENST00000635751 TRIM34Q9BYJ4 488 aa23.24■■□□□ 1.31
CLN8-208ENST00000635751 SHMT1P34896 483 aa23.24■■□□□ 1.31
CLN8-208ENST00000635751 DNM1Q05193 864 aaKnown RBP23.24■■□□□ 1.31
CLN8-208ENST00000635751 CCDC183Q5T5S1 534 aa23.24■■□□□ 1.31
CLN8-208ENST00000635751 PNMA8AQ86V59 439 aaPredicted RBP23.24■■□□□ 1.31
CLN8-208ENST00000635751 METTL16Q86W50 562 aaKnown RBP23.24■■□□□ 1.31
CLN8-208ENST00000635751 ZNF526Q8TF50 670 aaPredicted RBP23.24■■□□□ 1.31
CLN8-208ENST00000635751 ZKSCAN3Q9BRR0 538 aa23.24■■□□□ 1.31
CLN8-208ENST00000635751 VEGFAP15692 232 aaPredicted RBP23.23■■□□□ 1.31
CLN8-208ENST00000635751 PRAMEF18Q5VWM3 479 aa23.23■■□□□ 1.31
CLN8-208ENST00000635751 ZC3H15Q8WU90 426 aaKnown RBP23.23■■□□□ 1.31
CLN8-208ENST00000635751 GTF3C6Q969F1 213 aa23.23■■□□□ 1.31
CLN8-208ENST00000635751 TSPY2A6NKD2 308 aa23.22■■□□□ 1.31
CLN8-208ENST00000635751 LETM1O95202 739 aaPredicted RBP23.22■■□□□ 1.31
CLN8-208ENST00000635751 FGD1P98174 961 aa23.22■■□□□ 1.31
CLN8-208ENST00000635751 TFAP4Q01664 338 aa23.22■■□□□ 1.31
CLN8-208ENST00000635751 NBPF12Q5TAG4 269 aaPredicted RBP23.22■■□□□ 1.31
CLN8-208ENST00000635751 MIGA2Q7L4E1 593 aa23.22■■□□□ 1.31
CLN8-208ENST00000635751 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.22■■□□□ 1.313e-6■■■■■ 29.3
CLN8-208ENST00000635751 GPHNQ9NQX3 736 aaPredicted RBP23.22■■□□□ 1.31
CLN8-208ENST00000635751 DTNBO60941 627 aa23.22■■□□□ 1.31
CLN8-208ENST00000635751 STK3Q13188 491 aa23.22■■□□□ 1.31
CLN8-208ENST00000635751 HERC5Q9UII4 1024 aaKnown RBP23.22■■□□□ 1.31
CLN8-208ENST00000635751 WDR19Q8NEZ3 1342 aa23.21■■□□□ 1.31
CLN8-208ENST00000635751 TSPY3P0CV98 308 aa23.21■■□□□ 1.31
CLN8-208ENST00000635751 TSPY8P0CW00 308 aa23.21■■□□□ 1.31
CLN8-208ENST00000635751 SULF1Q8IWU6 871 aa23.21■■□□□ 1.31
CLN8-208ENST00000635751 NMRK2Q9NPI5 230 aa23.21■■□□□ 1.31
CLN8-208ENST00000635751 POTEIP0CG38 1075 aa23.2■■□□□ 1.3
CLN8-208ENST00000635751 POTEJP0CG39 1038 aa23.2■■□□□ 1.3
CLN8-208ENST00000635751 TATDN1Q6P1N9 297 aa23.2■■□□□ 1.3
CLN8-208ENST00000635751 DLK2Q6UY11 383 aa23.2■■□□□ 1.3
CLN8-208ENST00000635751 CDC37L1Q7L3B6 337 aa23.2■■□□□ 1.3
CLN8-208ENST00000635751 IGDCC4Q8TDY8 1250 aa23.2■■□□□ 1.3
CLN8-208ENST00000635751 PDLIM2Q96JY6 352 aa23.2■■□□□ 1.3
CLN8-208ENST00000635751 CLEC11AQ9Y240 323 aa23.2■■□□□ 1.3
CLN8-208ENST00000635751 PPP2R3BQ9Y5P8 575 aa23.2■■□□□ 1.3
CLN8-208ENST00000635751 ADM5C9JUS6 153 aa23.19■■□□□ 1.3
CLN8-208ENST00000635751 IFIT3O14879 490 aaKnown RBP23.19■■□□□ 1.3
CLN8-208ENST00000635751 TBC1D12O60347 775 aa23.19■■□□□ 1.3
CLN8-208ENST00000635751 KRT26Q7Z3Y9 468 aa23.19■■□□□ 1.3
CLN8-208ENST00000635751 BRF1Q92994 677 aa23.19■■□□□ 1.3
CLN8-208ENST00000635751 TMEM87BQ96K49 555 aa23.19■■□□□ 1.3
CLN8-208ENST00000635751 NMT2O60551 498 aa23.19■■□□□ 1.3
CLN8-208ENST00000635751 KRT85P78386 507 aa23.19■■□□□ 1.3
CLN8-208ENST00000635751 CERKLQ49MI3 558 aaPredicted RBP23.19■■□□□ 1.3
CLN8-208ENST00000635751 IQCA1Q86XH1 822 aa23.19■■□□□ 1.3
CLN8-208ENST00000635751 ZSCAN10Q96SZ4 725 aaPredicted RBP23.19■■□□□ 1.3
CLN8-208ENST00000635751 UBAC1Q9BSL1 405 aa23.19■■□□□ 1.3
CLN8-208ENST00000635751 AGXT2Q9BYV1 514 aa23.19■■□□□ 1.3
CLN8-208ENST00000635751 TAOK2Q9UL54 1235 aa23.19■■□□□ 1.3
CLN8-208ENST00000635751 SH2B2O14492 632 aaPredicted RBP23.18■■□□□ 1.3
CLN8-208ENST00000635751 AKR1B1P15121 316 aa23.18■■□□□ 1.3
CLN8-208ENST00000635751 NT5C2P49902 561 aa23.18■■□□□ 1.3
CLN8-208ENST00000635751 MAP3K10Q02779 954 aa23.18■■□□□ 1.3
CLN8-208ENST00000635751 TMEM67Q5HYA8 995 aa23.18■■□□□ 1.3
CLN8-208ENST00000635751 GREB1LQ9C091 1923 aaPredicted RBP23.18■■□□□ 1.3
CLN8-208ENST00000635751 SART3Q15020 963 aaKnown RBP23.17■■□□□ 1.3
CLN8-208ENST00000635751 HS1BP3Q53T59 392 aa23.17■■□□□ 1.3
CLN8-208ENST00000635751 FBXL16Q8N461 479 aa23.17■■□□□ 1.3
CLN8-208ENST00000635751 NEDD1Q8NHV4 660 aa23.17■■□□□ 1.3
CLN8-208ENST00000635751 SENP2Q9HC62 589 aa23.17■■□□□ 1.3
CLN8-208ENST00000635751 IL17RBQ9NRM6 502 aa23.17■■□□□ 1.3
CLN8-208ENST00000635751 ANGEL1Q9UNK9 670 aaKnown RBP23.17■■□□□ 1.3
CLN8-208ENST00000635751 TNKSO95271 1327 aa23.17■■□□□ 1.3
CLN8-208ENST00000635751 ATAD5Q96QE3 1844 aa23.17■■□□□ 1.3
CLN8-208ENST00000635751 ERICH2A1L162 156 aa23.17■■□□□ 1.3
CLN8-208ENST00000635751 MPHOSPH10O00566 681 aaKnown RBP23.17■■□□□ 1.3
CLN8-208ENST00000635751 APOBRQ0VD83 1088 aa23.17■■□□□ 1.3
CLN8-208ENST00000635751 RRP1BQ14684 758 aaKnown RBP23.17■■□□□ 1.3
CLN8-208ENST00000635751 LLPHQ9BRT6 129 aaKnown RBP23.17■■□□□ 1.3
CLN8-208ENST00000635751 MTA3Q9BTC8 594 aa23.17■■□□□ 1.3
CLN8-208ENST00000635751 LY9Q9HBG7 655 aa23.17■■□□□ 1.3
CLN8-208ENST00000635751 ELP1O95163 1332 aa23.16■■□□□ 1.3
CLN8-208ENST00000635751 FAM184AQ8NB25 1140 aa23.16■■□□□ 1.3
CLN8-208ENST00000635751 CCDC17Q96LX7 622 aa23.16■■□□□ 1.3
CLN8-208ENST00000635751 MYH4Q9Y623 1939 aa23.16■■□□□ 1.3
CLN8-208ENST00000635751 PFKFB2O60825 505 aa23.15■■□□□ 1.3
CLN8-208ENST00000635751 GDF11O95390 407 aa23.15■■□□□ 1.3
CLN8-208ENST00000635751 WTAPQ15007 396 aa23.15■■□□□ 1.3
CLN8-208ENST00000635751 SEC23AQ15436 765 aa23.15■■□□□ 1.3
CLN8-208ENST00000635751 SHROOM1Q2M3G4 852 aaPredicted RBP23.15■■□□□ 1.3
CLN8-208ENST00000635751 ENAHQ8N8S7 591 aaPredicted RBP23.15■■□□□ 1.3
CLN8-208ENST00000635751 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.15■■□□□ 1.3
CLN8-208ENST00000635751 GLIS2Q9BZE0 524 aaPredicted RBP23.15■■□□□ 1.3
CLN8-208ENST00000635751 TCP11L1Q9NUJ3 509 aa23.15■■□□□ 1.3
CLN8-208ENST00000635751 SUPT20HL1Q3ZLR7 823 aa23.15■■□□□ 1.3
CLN8-208ENST00000635751 FERMT3Q86UX7 667 aa23.15■■□□□ 1.3
CLN8-208ENST00000635751 LIFRP42702 1097 aa23.14■■□□□ 1.29
CLN8-208ENST00000635751 ABCB5Q2M3G0 1257 aa23.14■■□□□ 1.29
CLN8-208ENST00000635751 MAP1SQ66K74 1059 aaPredicted RBP23.14■■□□□ 1.29
CLN8-208ENST00000635751 RNF214Q8ND24 703 aa23.14■■□□□ 1.29
CLN8-208ENST00000635751 HOOK2Q96ED9 719 aa23.14■■□□□ 1.29
CLN8-208ENST00000635751 FZD1Q9UP38 647 aa23.14■■□□□ 1.29
CLN8-208ENST00000635751 JAK2O60674 1132 aa23.13■■□□□ 1.29
CLN8-208ENST00000635751 JAG1P78504 1218 aa23.13■■□□□ 1.29
CLN8-208ENST00000635751 SCRN1Q12765 414 aa23.13■■□□□ 1.29
CLN8-208ENST00000635751 DCAF15Q66K64 600 aa23.13■■□□□ 1.29
CLN8-208ENST00000635751 ZSCAN30Q86W11 494 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms