RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 CALM2P0DP24 149 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 CALM3P0DP25 149 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 AKR1B1P15121 316 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 NCLP19338 710 aaKnown RBP11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 GUCY1A2P33402 732 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 SSRP1Q08945 709 aaKnown RBP11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 CCDC82Q8N4S0 544 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 TMEM87AQ8NBN3 555 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 EHD4Q9H223 541 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 KAT14Q9H8E8 782 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 COL2A1P02458 1487 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 FUT2Q10981 343 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 DLGAP5Q15398 846 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 TMTC3Q6ZXV5 915 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 USP48Q86UV5 1035 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 CRACR2BQ8N4Y2 399 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 PNMA1Q8ND90 353 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 FBXO18Q8NFZ0 1043 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 CEP95Q96GE4 821 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 TMEM47Q9BQJ4 181 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 FHDC1Q9C0D6 1143 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 RBM28Q9NW13 759 aaKnown RBP11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 SWAP70Q9UH65 585 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 ATRNL1Q5VV63 1379 aa11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 CNTNAP5Q8WYK1 1306 aa11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 GADD45BO75293 160 aaPredicted RBP11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 PPP2R5BQ15173 497 aa11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 CCDC178Q5BJE1 867 aa11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 ILDR2Q71H61 639 aa11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 RASGRP2Q7LDG7 609 aa11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 CLEC10AQ8IUN9 316 aa11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 ZSCAN29Q8IWY8 852 aaPredicted RBP11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 OGFOD1Q8N543 542 aa11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 CTCFLQ8NI51 663 aaPredicted RBP11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 GPT2Q8TD30 523 aa11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 DHX36Q9H2U1 1008 aaKnown RBP11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 ZSCAN16Q9H4T2 348 aaPredicted RBP11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 ZNF70Q9UC06 446 aaPredicted RBP11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 STX8Q9UNK0 236 aa11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 DICER1Q9UPY3 1922 aaKnown RBP11.61□□□□□ -0.55
CACNA1A-216ENST00000635742 IGKV6D-41A0A0C4DH26 115 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 KIF28PB7ZC32 967 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 TCP10L2B9ZVM9 353 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 ENTPD3O75355 529 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 KRT85P78386 507 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 KLHL40Q2TBA0 621 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 SKOR2Q2VWA4 1001 aaPredicted RBP11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 SPDYE2Q495Y8 402 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 KRT40Q6A162 431 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 TRIM22Q8IYM9 498 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 ZBED3Q96IU2 234 aaPredicted RBP11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 TMOD2Q9NZR1 351 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 DDX49Q9Y6V7 483 aaKnown RBP11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 CNTNAP1P78357 1384 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 ZNF541Q9H0D2 1346 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 MYH4Q9Y623 1939 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 FZD9O00144 591 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 SBF1O95248 1867 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 NOVP48745 357 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 KIF23Q02241 960 aaPredicted RBP11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 GRM4Q14833 912 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 SHROOM1Q2M3G4 852 aaPredicted RBP11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 SRBD1Q8N5C6 995 aaKnown RBP11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 MTMR14Q8NCE2 650 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 RNF26Q9BY78 433 aaPredicted RBP11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 GZF1Q9H116 711 aaPredicted RBP11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 PI4KBQ9UBF8 816 aa11.6□□□□□ -0.55
CACNA1A-216ENST00000635742 hCG_1642624A0A1W2PR95 340 aa11.59□□□□□ -0.55
CACNA1A-216ENST00000635742 DEXIO95424 95 aa11.59□□□□□ -0.55
CACNA1A-216ENST00000635742 TNIP1Q15025 636 aa11.59□□□□□ -0.55
CACNA1A-216ENST00000635742 PKN1Q16512 942 aa11.59□□□□□ -0.55
CACNA1A-216ENST00000635742 STAG2Q8N3U4 1231 aa11.59□□□□□ -0.55
CACNA1A-216ENST00000635742 SHISA4Q96DD7 197 aa11.59□□□□□ -0.55
CACNA1A-216ENST00000635742 TFIP11Q9UBB9 837 aaKnown RBP11.59□□□□□ -0.55
CACNA1A-216ENST00000635742 MTMR7Q9Y216 660 aa11.59□□□□□ -0.55
CACNA1A-216ENST00000635742 PRPF3O43395 683 aaKnown RBP11.58□□□□□ -0.55
CACNA1A-216ENST00000635742 EGFRP00533 1210 aa11.58□□□□□ -0.55
CACNA1A-216ENST00000635742 TOP1P11387 765 aaKnown RBP11.58□□□□□ -0.55
CACNA1A-216ENST00000635742 GMPSP49915 693 aaPredicted RBP11.58□□□□□ -0.55
CACNA1A-216ENST00000635742 EIF6P56537 245 aaKnown RBP11.58□□□□□ -0.55
CACNA1A-216ENST00000635742 NBPF9Q3BBW0 867 aa11.58□□□□□ -0.55
CACNA1A-216ENST00000635742 RGS22Q8NE09 1264 aa11.58□□□□□ -0.55
CACNA1A-216ENST00000635742 WASF1Q92558 559 aa11.58□□□□□ -0.55
CACNA1A-216ENST00000635742 MAP3K14Q99558 947 aa11.58□□□□□ -0.55
CACNA1A-216ENST00000635742 FTOQ9C0B1 505 aaKnown RBP eCLIP11.58□□□□□ -0.55
CACNA1A-216ENST00000635742 VEZTQ9HBM0 779 aa11.58□□□□□ -0.55
CACNA1A-216ENST00000635742 MYOZ2Q9NPC6 264 aa11.58□□□□□ -0.55
CACNA1A-216ENST00000635742 MTMR4Q9NYA4 1195 aa11.58□□□□□ -0.55
CACNA1A-216ENST00000635742 MAD2L2Q9UI95 211 aa11.58□□□□□ -0.55
CACNA1A-216ENST00000635742 MPHOSPH10O00566 681 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-216ENST00000635742 WNT10BO00744 389 aa11.58□□□□□ -0.56
CACNA1A-216ENST00000635742 RPS12P25398 132 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-216ENST00000635742 KIF5BP33176 963 aa11.58□□□□□ -0.56
CACNA1A-216ENST00000635742 ZNF280AP59817 542 aaPredicted RBP11.58□□□□□ -0.56
CACNA1A-216ENST00000635742 SLC35G1Q2M3R5 365 aa11.58□□□□□ -0.56
CACNA1A-216ENST00000635742 METTL16Q86W50 562 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-216ENST00000635742 CDAN1Q8IWY9 1227 aa11.58□□□□□ -0.56
CACNA1A-216ENST00000635742 LRRC47Q8N1G4 583 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-216ENST00000635742 GJA3Q9Y6H8 435 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms