RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC00339-210ENST00000635675 MKNK2Q9HBH9 465 aa11.59□□□□□ -0.55
LINC00339-210ENST00000635675 ZNF287Q9HBT7 754 aa11.59□□□□□ -0.55
LINC00339-210ENST00000635675 PDHXO00330 501 aa11.58□□□□□ -0.56
LINC00339-210ENST00000635675 PRDM1O75626 825 aa11.58□□□□□ -0.56
LINC00339-210ENST00000635675 CTDSPL2Q05D32 466 aa11.58□□□□□ -0.56
LINC00339-210ENST00000635675 PDE4BQ07343 736 aa11.58□□□□□ -0.56
LINC00339-210ENST00000635675 CRHR2Q13324 411 aa11.58□□□□□ -0.56
LINC00339-210ENST00000635675 DGKZQ13574 1117 aa11.58□□□□□ -0.56
LINC00339-210ENST00000635675 GADL1Q6ZQY3 521 aa11.58□□□□□ -0.56
LINC00339-210ENST00000635675 PROCA1Q8NCQ7 364 aaPredicted RBP11.58□□□□□ -0.56
LINC00339-210ENST00000635675 ACER1Q8TDN7 264 aa11.58□□□□□ -0.56
LINC00339-210ENST00000635675 INCENPQ9NQS7 918 aa11.58□□□□□ -0.56
LINC00339-210ENST00000635675 PRDM10Q9NQV6 1147 aa11.58□□□□□ -0.56
LINC00339-210ENST00000635675 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.58□□□□□ -0.56
LINC00339-210ENST00000635675 SLC45A1Q9Y2W3 748 aa11.58□□□□□ -0.56
LINC00339-210ENST00000635675 TACC3Q9Y6A5 838 aa11.58□□□□□ -0.56
LINC00339-210ENST00000635675 A0A1W2PRG0 241 aa11.57□□□□□ -0.56
LINC00339-210ENST00000635675 TAF1CQ15572 869 aaPredicted RBP11.57□□□□□ -0.56
LINC00339-210ENST00000635675 TREML2Q5T2D2 321 aa11.57□□□□□ -0.56
LINC00339-210ENST00000635675 ZNF444Q8N0Y2 327 aaPredicted RBP11.57□□□□□ -0.56
LINC00339-210ENST00000635675 NBPF3Q9H094 633 aa11.57□□□□□ -0.56
LINC00339-210ENST00000635675 KIAA1683Q9H0B3 1180 aa11.57□□□□□ -0.56
LINC00339-210ENST00000635675 KANSL2Q9H9L4 492 aa11.57□□□□□ -0.56
LINC00339-210ENST00000635675 ZFYVE28Q9HCC9 887 aa11.57□□□□□ -0.56
LINC00339-210ENST00000635675 EMILIN3Q9NT22 766 aa11.57□□□□□ -0.56
LINC00339-210ENST00000635675 AGTPBP1Q9UPW5 1226 aa11.57□□□□□ -0.56
LINC00339-210ENST00000635675 LOC285556D6RIA3 1793 aa11.56□□□□□ -0.56
LINC00339-210ENST00000635675 GREB1LQ9C091 1923 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-210ENST00000635675 IGKV6D-41A0A0C4DH26 115 aa11.56□□□□□ -0.56
LINC00339-210ENST00000635675 GPR25O00155 361 aa11.56□□□□□ -0.56
LINC00339-210ENST00000635675 ORC4O43929 436 aa11.56□□□□□ -0.56
LINC00339-210ENST00000635675 HAND2P61296 217 aa11.56□□□□□ -0.56
LINC00339-210ENST00000635675 PTH1RQ03431 593 aa11.56□□□□□ -0.56
LINC00339-210ENST00000635675 USP17L2Q6R6M4 530 aa11.56□□□□□ -0.56
LINC00339-210ENST00000635675 CLEC10AQ8IUN9 316 aa11.56□□□□□ -0.56
LINC00339-210ENST00000635675 C12orf42Q96LP6 360 aa11.56□□□□□ -0.56
LINC00339-210ENST00000635675 TMOD4Q9NZQ9 345 aa11.56□□□□□ -0.56
LINC00339-210ENST00000635675 CTNNA3Q9UI47 895 aa11.56□□□□□ -0.56
LINC00339-210ENST00000635675 CASP8AP2Q9UKL3 1982 aa11.56□□□□□ -0.56
LINC00339-210ENST00000635675 ZNF213O14771 459 aa11.55□□□□□ -0.56
LINC00339-210ENST00000635675 TLR2O60603 784 aa11.55□□□□□ -0.56
LINC00339-210ENST00000635675 EEF2P13639 858 aaKnown RBP11.55□□□□□ -0.56
LINC00339-210ENST00000635675 HOXA7P31268 230 aaPredicted RBP11.55□□□□□ -0.56
LINC00339-210ENST00000635675 USP14P54578 494 aa11.55□□□□□ -0.56
LINC00339-210ENST00000635675 CACNB1Q02641 598 aaPredicted RBP11.55□□□□□ -0.56
LINC00339-210ENST00000635675 ICA1Q05084 483 aa11.55□□□□□ -0.56
LINC00339-210ENST00000635675 NEDD1Q8NHV4 660 aa11.55□□□□□ -0.56
LINC00339-210ENST00000635675 ZNF296Q8WUU4 475 aaPredicted RBP11.55□□□□□ -0.56
LINC00339-210ENST00000635675 FEZ1Q99689 392 aa11.55□□□□□ -0.56
LINC00339-210ENST00000635675 ESYT1Q9BSJ8 1104 aa11.55□□□□□ -0.56
LINC00339-210ENST00000635675 TMX2Q9Y320 296 aa11.55□□□□□ -0.56
LINC00339-210ENST00000635675 ADGRA2Q96PE1 1338 aa11.55□□□□□ -0.56
LINC00339-210ENST00000635675 CDC45O75419 566 aa11.54□□□□□ -0.56
LINC00339-210ENST00000635675 TSPY3P0CV98 308 aa11.54□□□□□ -0.56
LINC00339-210ENST00000635675 TSPY8P0CW00 308 aa11.54□□□□□ -0.56
LINC00339-210ENST00000635675 CYP2C8P10632 490 aa11.54□□□□□ -0.56
LINC00339-210ENST00000635675 PCP11498 1178 aaKnown RBP11.54□□□□□ -0.56
LINC00339-210ENST00000635675 TFAP4Q01664 338 aa11.54□□□□□ -0.56
LINC00339-210ENST00000635675 FAM47AQ5JRC9 791 aa11.54□□□□□ -0.56
LINC00339-210ENST00000635675 AKNAD1Q5T1N1 836 aa11.54□□□□□ -0.56
LINC00339-210ENST00000635675 C17orf99Q6UX52 265 aa11.54□□□□□ -0.56
LINC00339-210ENST00000635675 TBC1D10CQ8IV04 446 aa11.54□□□□□ -0.56
LINC00339-210ENST00000635675 STAG1Q8WVM7 1258 aa11.54□□□□□ -0.56
LINC00339-210ENST00000635675 MAP4K1Q92918 833 aa11.54□□□□□ -0.56
LINC00339-210ENST00000635675 PARK7Q99497 189 aaKnown RBP11.54□□□□□ -0.56
LINC00339-210ENST00000635675 ARHGEF10LQ9HCE6 1279 aa11.54□□□□□ -0.56
LINC00339-210ENST00000635675 NYAP2Q9P242 653 aa11.54□□□□□ -0.56
LINC00339-210ENST00000635675 PLIN4Q96Q06 1357 aa11.54□□□□□ -0.56
LINC00339-210ENST00000635675 FKTNO75072 461 aa11.53□□□□□ -0.56
LINC00339-210ENST00000635675 PABPC4Q13310 644 aaKnown RBP eCLIP11.53□□□□□ -0.563e-16■■■■■ 34.8
LINC00339-210ENST00000635675 ZYXQ15942 572 aaKnown RBP11.53□□□□□ -0.56
LINC00339-210ENST00000635675 IMMTQ16891 758 aaKnown RBP11.53□□□□□ -0.56
LINC00339-210ENST00000635675 KIAA1755Q5JYT7 1200 aa11.53□□□□□ -0.56
LINC00339-210ENST00000635675 COL13A1Q5TAT6 717 aaPredicted RBP11.53□□□□□ -0.56
LINC00339-210ENST00000635675 MFSD6Q6ZSS7 791 aa11.53□□□□□ -0.56
LINC00339-210ENST00000635675 MKL1Q969V6 931 aa11.53□□□□□ -0.56
LINC00339-210ENST00000635675 CEP95Q96GE4 821 aa11.53□□□□□ -0.56
LINC00339-210ENST00000635675 LSG1Q9H089 658 aaKnown RBP11.53□□□□□ -0.56
LINC00339-210ENST00000635675 ASCC2Q9H1I8 757 aaPredicted RBP11.53□□□□□ -0.56
LINC00339-210ENST00000635675 SH2D4AQ9H788 454 aa11.53□□□□□ -0.56
LINC00339-210ENST00000635675 IL17RBQ9NRM6 502 aa11.53□□□□□ -0.56
LINC00339-210ENST00000635675 MTMR4Q9NYA4 1195 aa11.53□□□□□ -0.56
LINC00339-210ENST00000635675 LAMA4Q16363 1823 aa11.53□□□□□ -0.56
LINC00339-210ENST00000635675 TSPY2A6NKD2 308 aa11.52□□□□□ -0.56
LINC00339-210ENST00000635675 RANBP6O60518 1105 aaKnown RBP11.52□□□□□ -0.56
LINC00339-210ENST00000635675 VCAM1P19320 739 aa11.52□□□□□ -0.56
LINC00339-210ENST00000635675 OSBPP22059 807 aa11.52□□□□□ -0.56
LINC00339-210ENST00000635675 ATP2B2Q01814 1243 aa11.52□□□□□ -0.56
LINC00339-210ENST00000635675 SP3Q02447 781 aa11.52□□□□□ -0.56
LINC00339-210ENST00000635675 KIAA1211Q6ZU35 1233 aa11.52□□□□□ -0.56
LINC00339-210ENST00000635675 NKX2-3Q8TAU0 364 aa11.52□□□□□ -0.56
LINC00339-210ENST00000635675 LPAR1Q92633 364 aa11.52□□□□□ -0.56
LINC00339-210ENST00000635675 RNF41Q9H4P4 317 aaPredicted RBP11.52□□□□□ -0.56
LINC00339-210ENST00000635675 VCPKMTQ9H867 229 aa11.52□□□□□ -0.56
LINC00339-210ENST00000635675 CLIP2Q9UDT6 1046 aa11.52□□□□□ -0.56
LINC00339-210ENST00000635675 CPA4Q9UI42 421 aa11.52□□□□□ -0.56
LINC00339-210ENST00000635675 PNMA3Q9UL41 463 aa11.52□□□□□ -0.56
LINC00339-210ENST00000635675 U3KPZ7 1027 aaPredicted RBP11.52□□□□□ -0.56
LINC00339-210ENST00000635675 USP17L15C9J2P7 530 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms