RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 PDE3AQ14432 1141 aa15.75■□□□□ 0.11
LINC00339-206ENST00000634451 RAB3GAP1Q15042 981 aa15.75■□□□□ 0.11
LINC00339-206ENST00000634451 WDR78Q5VTH9 848 aa15.75■□□□□ 0.11
LINC00339-206ENST00000634451 TDHQ8IZJ6 230 aa15.75■□□□□ 0.11
LINC00339-206ENST00000634451 TRPV1Q8NER1 839 aa15.75■□□□□ 0.11
LINC00339-206ENST00000634451 NPLOC4Q8TAT6 608 aa15.75■□□□□ 0.11
LINC00339-206ENST00000634451 FEZ1Q99689 392 aa15.75■□□□□ 0.11
LINC00339-206ENST00000634451 UBE2OQ9C0C9 1292 aaKnown RBP15.75■□□□□ 0.11
LINC00339-206ENST00000634451 HLA-DOAP06340 250 aa15.74■□□□□ 0.11
LINC00339-206ENST00000634451 VCAM1P19320 739 aa15.74■□□□□ 0.11
LINC00339-206ENST00000634451 SHMT1P34896 483 aa15.74■□□□□ 0.11
LINC00339-206ENST00000634451 MAP2K5Q13163 448 aa15.74■□□□□ 0.11
LINC00339-206ENST00000634451 ZKSCAN2Q63HK3 967 aa15.74■□□□□ 0.11
LINC00339-206ENST00000634451 TATDN1Q6P1N9 297 aa15.74■□□□□ 0.11
LINC00339-206ENST00000634451 ZNF512BQ96KM6 892 aaPredicted RBP15.74■□□□□ 0.11
LINC00339-206ENST00000634451 C12orf42Q96LP6 360 aa15.74■□□□□ 0.11
LINC00339-206ENST00000634451 MTMR10Q9NXD2 777 aa15.74■□□□□ 0.11
LINC00339-206ENST00000634451 LAMA2P24043 3122 aaKnown RBP15.74■□□□□ 0.11
LINC00339-206ENST00000634451 NAV1Q8NEY1 1877 aa15.74■□□□□ 0.11
LINC00339-206ENST00000634451 SPDYE16A6NNV3 312 aaPredicted RBP15.73■□□□□ 0.11
LINC00339-206ENST00000634451 SMIM22K7EJ46 135 aa15.73■□□□□ 0.11
LINC00339-206ENST00000634451 CYP2C19P33261 490 aa15.73■□□□□ 0.11
LINC00339-206ENST00000634451 USP5P45974 858 aa15.73■□□□□ 0.11
LINC00339-206ENST00000634451 ATN1P54259 1190 aaPredicted RBP15.73■□□□□ 0.11
LINC00339-206ENST00000634451 LRIT3Q3SXY7 679 aa15.73■□□□□ 0.11
LINC00339-206ENST00000634451 SLFNL1Q499Z3 407 aa15.73■□□□□ 0.11
LINC00339-206ENST00000634451 KIAA1755Q5JYT7 1200 aa15.73■□□□□ 0.11
LINC00339-206ENST00000634451 CLEC10AQ8IUN9 316 aa15.73■□□□□ 0.11
LINC00339-206ENST00000634451 CCAR1Q8IX12 1150 aaKnown RBP15.73■□□□□ 0.11
LINC00339-206ENST00000634451 EXOC6BQ9Y2D4 811 aa15.73■□□□□ 0.11
LINC00339-206ENST00000634451 NOP58Q9Y2X3 529 aaKnown RBP15.73■□□□□ 0.11
LINC00339-206ENST00000634451 RLFQ13129 1914 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 A0A1W2PRG0 241 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 USP17L15C9J2P7 530 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 USP17L13C9JLJ4 530 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 USP17L11C9JVI0 530 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 USP17L18D6R9N7 530 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 USP17L22D6RA61 530 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 USP17L17D6RBQ6 530 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 USP17L19D6RCP7 530 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 USP17L20D6RJB6 530 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 CYP2D6P10635 497 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 CAPN2P17655 700 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 USP17L24Q0WX57 530 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 SEPT2Q15019 361 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 ANO1Q5XXA6 986 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 CATSPERGQ6ZRH7 1159 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 SLC44A5Q8NCS7 719 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 RIOK1Q9BRS2 568 aaKnown RBP15.72■□□□□ 0.11
LINC00339-206ENST00000634451 RPAP3Q9H6T3 665 aaPredicted RBP15.72■□□□□ 0.11
LINC00339-206ENST00000634451 SERPINB13Q9UIV8 391 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 RABGAP1Q9Y3P9 1069 aa15.72■□□□□ 0.11
LINC00339-206ENST00000634451 PTPREP23469 700 aa15.71■□□□□ 0.11
LINC00339-206ENST00000634451 ABCB5Q2M3G0 1257 aa15.71■□□□□ 0.11
LINC00339-206ENST00000634451 ITPRIPQ8IWB1 547 aa15.71■□□□□ 0.11
LINC00339-206ENST00000634451 EDC3Q96F86 508 aaKnown RBP15.71■□□□□ 0.11
LINC00339-206ENST00000634451 SENP6Q9GZR1 1112 aaPredicted RBP15.71■□□□□ 0.11
LINC00339-206ENST00000634451 GINM1Q9NU53 330 aa15.71■□□□□ 0.11
LINC00339-206ENST00000634451 UNC80Q8N2C7 3258 aa15.71■□□□□ 0.11
LINC00339-206ENST00000634451 LTBP2Q14767 1821 aa15.71■□□□□ 0.1
LINC00339-206ENST00000634451 CHGBP05060 677 aa15.7■□□□□ 0.1
LINC00339-206ENST00000634451 CERKLQ49MI3 558 aaPredicted RBP15.7■□□□□ 0.1
LINC00339-206ENST00000634451 CEP85Q6P2H3 762 aa15.7■□□□□ 0.1
LINC00339-206ENST00000634451 AACSQ86V21 672 aa15.7■□□□□ 0.1
LINC00339-206ENST00000634451 FAM161BQ96MY7 647 aa15.7■□□□□ 0.1
LINC00339-206ENST00000634451 KIAA1683Q9H0B3 1180 aa15.7■□□□□ 0.1
LINC00339-206ENST00000634451 CWC22Q9HCG8 908 aaKnown RBP15.7■□□□□ 0.1
LINC00339-206ENST00000634451 IL1RAPL2Q9NP60 686 aa15.7■□□□□ 0.1
LINC00339-206ENST00000634451 CCER2I3L3R5 266 aa15.69■□□□□ 0.1
LINC00339-206ENST00000634451 IGHA2P01877 340 aa15.69■□□□□ 0.1
LINC00339-206ENST00000634451 CNGA1P29973 690 aa15.69■□□□□ 0.1
LINC00339-206ENST00000634451 GRB14Q14449 540 aa15.69■□□□□ 0.1
LINC00339-206ENST00000634451 GJC2Q5T442 439 aaPredicted RBP15.69■□□□□ 0.1
LINC00339-206ENST00000634451 SDR42E1Q8WUS8 393 aa15.69■□□□□ 0.1
LINC00339-206ENST00000634451 GUCD1Q96NT3 240 aa15.69■□□□□ 0.1
LINC00339-206ENST00000634451 BCL11AQ9H165 835 aa15.69■□□□□ 0.1
LINC00339-206ENST00000634451 EHD4Q9H223 541 aa15.69■□□□□ 0.1
LINC00339-206ENST00000634451 DDX20Q9UHI6 824 aaKnown RBP15.69■□□□□ 0.1
LINC00339-206ENST00000634451 A0A0G2JMZ2 1700 aa15.68■□□□□ 0.1
LINC00339-206ENST00000634451 SLC15A5A6NIM6 579 aa15.68■□□□□ 0.1
LINC00339-206ENST00000634451 CYBAP13498 195 aa15.68■□□□□ 0.1
LINC00339-206ENST00000634451 GABPAQ06546 454 aa15.68■□□□□ 0.1
LINC00339-206ENST00000634451 PRAMEF19Q5SWL8 479 aa15.68■□□□□ 0.1
LINC00339-206ENST00000634451 MFSD14CQ5VZR4 134 aa15.68■□□□□ 0.1
LINC00339-206ENST00000634451 TRMT44Q8IYL2 757 aaKnown RBP15.68■□□□□ 0.1
LINC00339-206ENST00000634451 PANK1Q8TE04 598 aa15.68■□□□□ 0.1
LINC00339-206ENST00000634451 GTF3C2Q8WUA4 911 aaPredicted RBP15.68■□□□□ 0.1
LINC00339-206ENST00000634451 DYNLL2Q96FJ2 89 aa15.68■□□□□ 0.1
LINC00339-206ENST00000634451 MOV10L1Q9BXT6 1211 aaKnown RBP15.68■□□□□ 0.1
LINC00339-206ENST00000634451 STXBP5LQ9Y2K9 1186 aa15.68■□□□□ 0.1
LINC00339-206ENST00000634451 BAZ2AQ9UIF9 1905 aaKnown RBP15.68■□□□□ 0.1
LINC00339-206ENST00000634451 EYSQ5T1H1 3165 aa15.67■□□□□ 0.1
LINC00339-206ENST00000634451 APBB1O00213 710 aa15.67■□□□□ 0.1
LINC00339-206ENST00000634451 COBLO75128 1261 aa15.67■□□□□ 0.1
LINC00339-206ENST00000634451 PDE6AP16499 860 aa15.67■□□□□ 0.1
LINC00339-206ENST00000634451 RTP1P59025 263 aa15.67■□□□□ 0.1
LINC00339-206ENST00000634451 ATP2B2Q01814 1243 aa15.67■□□□□ 0.1
LINC00339-206ENST00000634451 GPR153Q6NV75 609 aa15.67■□□□□ 0.1
LINC00339-206ENST00000634451 LCORLQ8N3X6 602 aa15.67■□□□□ 0.1
LINC00339-206ENST00000634451 SMCHD1A6NHR9 2005 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms