RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	ZIC5	Q96T25	663 aa		30.76	■■■□□ 2.51
UBE3A-222	ENST00000630907	USP26	Q9BXU7	913 aa		30.76	■■■□□ 2.51
UBE3A-222	ENST00000630907	ICA1	Q05084	483 aa		30.75	■■■□□ 2.51
UBE3A-222	ENST00000630907	TRDN	Q13061	729 aa		30.75	■■■□□ 2.51
UBE3A-222	ENST00000630907	PLIN4	Q96Q06	1357 aa		30.75	■■■□□ 2.51
UBE3A-222	ENST00000630907	IGKV6D-41	A0A0C4DH26	115 aa		30.74	■■■□□ 2.51
UBE3A-222	ENST00000630907	HSPA4	P34932	840 aa		30.74	■■■□□ 2.51
UBE3A-222	ENST00000630907	STOX1	Q6ZVD7	989 aa		30.74	■■■□□ 2.51
UBE3A-222	ENST00000630907	MS4A4A	Q96JQ5	239 aa		30.74	■■■□□ 2.51
UBE3A-222	ENST00000630907		B4E1Z4	1266 aa		30.73	■■■□□ 2.51
UBE3A-222	ENST00000630907	KDM4A	O75164	1064 aa		30.73	■■■□□ 2.51
UBE3A-222	ENST00000630907	CLEC10A	Q8IUN9	316 aa		30.73	■■■□□ 2.51
UBE3A-222	ENST00000630907	NKX2-3	Q8TAU0	364 aa		30.73	■■■□□ 2.51
UBE3A-222	ENST00000630907	ACER1	Q8TDN7	264 aa		30.73	■■■□□ 2.51
UBE3A-222	ENST00000630907	ARHGEF10L	Q9HCE6	1279 aa		30.73	■■■□□ 2.51
UBE3A-222	ENST00000630907	USP17L10	C9JJH3	530 aa		30.72	■■■□□ 2.51
UBE3A-222	ENST00000630907	CETP	P11597	493 aa		30.72	■■■□□ 2.51
UBE3A-222	ENST00000630907	ZKSCAN1	P17029	563 aa	Predicted RBP	30.72	■■■□□ 2.51
UBE3A-222	ENST00000630907	BACE1	P56817	501 aa		30.72	■■■□□ 2.51
UBE3A-222	ENST00000630907	INHBE	P58166	350 aa		30.72	■■■□□ 2.51
UBE3A-222	ENST00000630907	SREBF2	Q12772	1141 aa		30.72	■■■□□ 2.51
UBE3A-222	ENST00000630907	RALYL	Q86SE5	291 aa	Known RBP	30.72	■■■□□ 2.51
UBE3A-222	ENST00000630907	REM2	Q8IYK8	340 aa	Predicted RBP	30.72	■■■□□ 2.51
UBE3A-222	ENST00000630907	NCOA7	Q8NI08	942 aa		30.72	■■■□□ 2.51
UBE3A-222	ENST00000630907	CEP95	Q96GE4	821 aa		30.72	■■■□□ 2.51
UBE3A-222	ENST00000630907	FEZ1	Q99689	392 aa		30.72	■■■□□ 2.51
UBE3A-222	ENST00000630907	PHIP	Q8WWQ0	1821 aa		30.72	■■■□□ 2.51
UBE3A-222	ENST00000630907	CCL15-CCL14	A0A0B4J2E2	113 aa		30.71	■■■□□ 2.51
UBE3A-222	ENST00000630907		A0A0G2JLL6	359 aa	Predicted RBP	30.71	■■■□□ 2.51
UBE3A-222	ENST00000630907	SEC24B	O95487	1268 aa		30.71	■■■□□ 2.51
UBE3A-222	ENST00000630907	EEF2	P13639	858 aa	Known RBP	30.71	■■■□□ 2.51
UBE3A-222	ENST00000630907	ATP2B2	Q01814	1243 aa		30.71	■■■□□ 2.51
UBE3A-222	ENST00000630907	MTMR2	Q13614	643 aa		30.71	■■■□□ 2.51
UBE3A-222	ENST00000630907	CCL15	Q16663	113 aa		30.71	■■■□□ 2.51
UBE3A-222	ENST00000630907	PRRT2	Q7Z6L0	340 aa	Predicted RBP	30.71	■■■□□ 2.51
UBE3A-222	ENST00000630907	SIAH1	Q8IUQ4	282 aa		30.71	■■■□□ 2.51
UBE3A-222	ENST00000630907	KCNB2	Q92953	911 aa		30.71	■■■□□ 2.51
UBE3A-222	ENST00000630907	MTMR4	Q9NYA4	1195 aa		30.71	■■■□□ 2.51
UBE3A-222	ENST00000630907	TESPA1	A2RU30	521 aa	Predicted RBP	30.7	■■■□□ 2.51
UBE3A-222	ENST00000630907	C19orf81	C9J6K1	198 aa		30.7	■■■□□ 2.51
UBE3A-222	ENST00000630907	MCC	P23508	829 aa		30.7	■■■□□ 2.51
UBE3A-222	ENST00000630907	TSGA10IP	Q3SY00	556 aa		30.7	■■■□□ 2.51
UBE3A-222	ENST00000630907	PPP4R3B	Q5MIZ7	849 aa		30.7	■■■□□ 2.51
UBE3A-222	ENST00000630907	RASEF	Q8IZ41	740 aa		30.7	■■■□□ 2.51
UBE3A-222	ENST00000630907	IL17RB	Q9NRM6	502 aa		30.7	■■■□□ 2.51
UBE3A-222	ENST00000630907	TCP11L1	Q9NUJ3	509 aa		30.7	■■■□□ 2.51
UBE3A-222	ENST00000630907	ZSWIM5	Q9P217	1185 aa		30.7	■■■□□ 2.51
UBE3A-222	ENST00000630907	NYAP2	Q9P242	653 aa		30.7	■■■□□ 2.51
UBE3A-222	ENST00000630907	GREB1L	Q9C091	1923 aa	Predicted RBP	30.69	■■■□□ 2.5
UBE3A-222	ENST00000630907		A0A1W2PRG0	241 aa		30.69	■■■□□ 2.5
UBE3A-222	ENST00000630907	SH3D19	Q5HYK7	790 aa		30.69	■■■□□ 2.5
UBE3A-222	ENST00000630907	BRI3BP	Q8WY22	251 aa		30.69	■■■□□ 2.5
UBE3A-222	ENST00000630907	KIAA1683	Q9H0B3	1180 aa		30.69	■■■□□ 2.5
UBE3A-222	ENST00000630907	SH2D4A	Q9H788	454 aa		30.69	■■■□□ 2.5
UBE3A-222	ENST00000630907	NMT2	O60551	498 aa		30.68	■■■□□ 2.5
UBE3A-222	ENST00000630907	TTLL1	O95922	423 aa		30.68	■■■□□ 2.5
UBE3A-222	ENST00000630907	TM4SF4	P48230	202 aa		30.68	■■■□□ 2.5
UBE3A-222	ENST00000630907	HMGCS2	P54868	508 aa		30.68	■■■□□ 2.5
UBE3A-222	ENST00000630907	USP17L2	Q6R6M4	530 aa		30.68	■■■□□ 2.5
UBE3A-222	ENST00000630907	FASTKD5	Q7L8L6	764 aa	Known RBP	30.68	■■■□□ 2.5
UBE3A-222	ENST00000630907	CLIP2	Q9UDT6	1046 aa		30.68	■■■□□ 2.5
UBE3A-222	ENST00000630907	TMX2	Q9Y320	296 aa		30.68	■■■□□ 2.5
UBE3A-222	ENST00000630907	USP14	P54578	494 aa		30.67	■■■□□ 2.5
UBE3A-222	ENST00000630907	KRT32	Q14532	448 aa		30.67	■■■□□ 2.5
UBE3A-222	ENST00000630907	GADL1	Q6ZQY3	521 aa		30.67	■■■□□ 2.5
UBE3A-222	ENST00000630907	IQCA1	Q86XH1	822 aa		30.67	■■■□□ 2.5
UBE3A-222	ENST00000630907	TMOD4	Q9NZQ9	345 aa		30.67	■■■□□ 2.5
UBE3A-222	ENST00000630907	MOGS	Q13724	837 aa		30.66	■■■□□ 2.5
UBE3A-222	ENST00000630907	ZYX	Q15942	572 aa	Known RBP	30.66	■■■□□ 2.5
UBE3A-222	ENST00000630907	CCDC178	Q5BJE1	867 aa		30.66	■■■□□ 2.5
UBE3A-222	ENST00000630907	MKL1	Q969V6	931 aa		30.66	■■■□□ 2.5
UBE3A-222	ENST00000630907	ZKSCAN3	Q9BRR0	538 aa		30.66	■■■□□ 2.5
UBE3A-222	ENST00000630907	STX8	Q9UNK0	236 aa		30.66	■■■□□ 2.5
UBE3A-222	ENST00000630907	SNX14	Q9Y5W7	946 aa		30.66	■■■□□ 2.5
UBE3A-222	ENST00000630907	THSD7B	Q9C0I4	1608 aa		30.65	■■■□□ 2.5
UBE3A-222	ENST00000630907	CYB5R4	Q7L1T6	521 aa		30.65	■■■□□ 2.5
UBE3A-222	ENST00000630907	MB21D2	Q8IYB1	491 aa	Predicted RBP	30.65	■■■□□ 2.5
UBE3A-222	ENST00000630907	PROCA1	Q8NCQ7	364 aa	Predicted RBP	30.65	■■■□□ 2.5
UBE3A-222	ENST00000630907	PTPN18	Q99952	460 aa		30.65	■■■□□ 2.5
UBE3A-222	ENST00000630907	EMILIN3	Q9NT22	766 aa		30.65	■■■□□ 2.5
UBE3A-222	ENST00000630907	NOV	P48745	357 aa		30.64	■■■□□ 2.5
UBE3A-222	ENST00000630907	DGKZ	Q13574	1117 aa		30.64	■■■□□ 2.5
UBE3A-222	ENST00000630907	IFNL1	Q8IU54	200 aa		30.64	■■■□□ 2.5
UBE3A-222	ENST00000630907	NEK1	Q96PY6	1258 aa		30.64	■■■□□ 2.5
UBE3A-222	ENST00000630907	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	30.64	■■■□□ 2.5
UBE3A-222	ENST00000630907	UBAC1	Q9BSL1	405 aa		30.64	■■■□□ 2.5
UBE3A-222	ENST00000630907	OTUD7B	Q6GQQ9	843 aa		30.63	■■■□□ 2.49
UBE3A-222	ENST00000630907	C12orf42	Q96LP6	360 aa		30.63	■■■□□ 2.49
UBE3A-222	ENST00000630907	TTC14	Q96N46	770 aa		30.63	■■■□□ 2.49
UBE3A-222	ENST00000630907	BTBD19	C9JJ37	291 aa		30.62	■■■□□ 2.49
UBE3A-222	ENST00000630907	IGF2BP3	O00425	579 aa	Known RBP eCLIP	30.62	■■■□□ 2.49
UBE3A-222	ENST00000630907	MAP2K1	Q02750	393 aa	Predicted RBP	30.62	■■■□□ 2.49
UBE3A-222	ENST00000630907	ADCK5	Q3MIX3	580 aa		30.62	■■■□□ 2.49
UBE3A-222	ENST00000630907	ANKRD23	Q86SG2	305 aa		30.62	■■■□□ 2.49
UBE3A-222	ENST00000630907	DGKH	Q86XP1	1220 aa		30.62	■■■□□ 2.49
UBE3A-222	ENST00000630907	VCPKMT	Q9H867	229 aa		30.62	■■■□□ 2.49
UBE3A-222	ENST00000630907	SYNPO2	Q9UMS6	1093 aa		30.62	■■■□□ 2.49
UBE3A-222	ENST00000630907	MCM5	P33992	734 aa		30.61	■■■□□ 2.49
UBE3A-222	ENST00000630907	GPAT2	Q6NUI2	795 aa		30.61	■■■□□ 2.49
UBE3A-222	ENST00000630907	LRRC47	Q8N1G4	583 aa	Known RBP	30.61	■■■□□ 2.49

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms